Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11m09f
         (323 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    27   0.065
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    25   0.26 
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       22   1.4  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   3.2  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   3.2  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    19   9.9  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 26.6 bits (56), Expect = 0.065
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
 Frame = +2

Query: 35  PDNKPFGYPFDRPVLP-----QYFKQPNMFFKKVLV 127
           PD +  GYPFDR         Q F  PNM  ++V++
Sbjct: 634 PDRRSMGYPFDRMPRDGVDTLQQFLTPNMRVQEVVI 669


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 0.26
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 35  PDNKPFGYPFDR 70
           PD +  GYPFDR
Sbjct: 635 PDRRSMGYPFDR 646


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 22.2 bits (45), Expect = 1.4
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = +2

Query: 5   KESEPFKSVVPDNKPF--GYPFDRPVLPQYFKQPN 103
           +ESEP  +     + F  GYP     LP++F  P+
Sbjct: 5   EESEPITTNSEAARDFVQGYPASVQPLPRHFNPPS 39


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.0 bits (42), Expect = 3.2
 Identities = 6/21 (28%), Positives = 14/21 (66%)
 Frame = +2

Query: 104 MFFKKVLVYHEGELFPYLFNI 166
           ++F +++VY    + P L+N+
Sbjct: 333 LYFCRIMVYLNSAINPILYNL 353


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 3.2
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = +3

Query: 81  LSTSNNLTCSSRRSWSTMKENYSPIYLTFLTIHQIKRNYNA 203
           L   N +T     SW+ +    SP+Y + L     + N NA
Sbjct: 193 LDVINVMTYDFHGSWAGVTAQNSPLYASPLDGEWQRDNLNA 233


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 19.4 bits (38), Expect = 9.9
 Identities = 5/15 (33%), Positives = 11/15 (73%)
 Frame = +3

Query: 114 RRSWSTMKENYSPIY 158
           R +W+   +++SP+Y
Sbjct: 217 RGNWAGFADSHSPLY 231


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,183
Number of Sequences: 336
Number of extensions: 1472
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6155018
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)