Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11m03f
         (616 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    23   2.7  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.7  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   2.7  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    22   3.6  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   3.6  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   8.2  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   8.2  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    21   8.2  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   8.2  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    21   8.2  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    21   8.2  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   8.2  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   8.2  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    21   8.2  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   8.2  

>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +3

Query: 291 QSSTSSETHRKPLSESSRPVQSSEPGP 371
           QSS SS +H+       RP  +S   P
Sbjct: 242 QSSGSSRSHQPATKSKPRPAPASRNAP 268


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 11/37 (29%), Positives = 15/37 (40%)
 Frame = +1

Query: 295 LPQAQRPTGNPSVKVPDQFSHQSQVLPRLKSHYQYPP 405
           LP       +PSV V   +  QS + P      + PP
Sbjct: 701 LPSPSTSVASPSVSVASPYMLQSPLTPHEAFDVKLPP 737


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 11/37 (29%), Positives = 15/37 (40%)
 Frame = +1

Query: 295 LPQAQRPTGNPSVKVPDQFSHQSQVLPRLKSHYQYPP 405
           LP       +PSV V   +  QS + P      + PP
Sbjct: 593 LPSPSTSVASPSVSVASPYMLQSPLTPHEAFDVKLPP 629


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -1

Query: 562 YHSGQDQIRESVIFINLRFSLKNNFSSL 479
           YH  +  +++S IFINL F L++N   L
Sbjct: 118 YHLQKINVQQSGIFINLPF-LEHNLIRL 144


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = +1

Query: 289 NSLPQAQRPTGNPSVKVPDQFSHQSQVLPRLKSHYQYPPHLLVLQRKMK 435
           +S PQ   PTG P V+   +  H+    PR     Q    LL L++K +
Sbjct: 91  SSSPQTSAPTGPPIVRCALR-KHKPNRKPRTPFTTQ---QLLALEKKFR 135


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 9/38 (23%), Positives = 19/38 (50%)
 Frame = +3

Query: 267 VNGAVLFEQSSTSSETHRKPLSESSRPVQSSEPGPSTS 380
           +NG +  E    + ++   P+S S     ++ P P+T+
Sbjct: 2   MNGGIYEESPPPAPQSAATPISSSGMTSPAAAPPPATT 39


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 135 LRIFARIDAPSH 100
           +RI   IDAPSH
Sbjct: 298 VRIIIEIDAPSH 309


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +3

Query: 249 MIYLNPVNGAVLFEQSSTSSETHRKPLSESSR 344
           M+YLN     +L+   S+   T     SES+R
Sbjct: 339 MVYLNSAINPILYNLMSSKFRTGFIICSESNR 370


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 1   GSFMLMRRCLDHKKCYCEFSHPKVQRE 81
           GS  +MR  +DHK+ +      K  +E
Sbjct: 85  GSKKIMRHLIDHKRDWWNELEEKYDKE 111


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 169 TRTDSARKKSHPANRDSC 222
           T + SA +  +PA+R SC
Sbjct: 222 TSSSSALESPNPASRSSC 239


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 169 TRTDSARKKSHPANRDSC 222
           T + SA +  +PA+R SC
Sbjct: 11  TSSSSALESPNPASRSSC 28


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 169 TRTDSARKKSHPANRDSC 222
           T + SA +  +PA+R SC
Sbjct: 11  TSSSSALESPNPASRSSC 28


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = +1

Query: 238 VMAT*YT*IQSMVLYSLNSLPQAQRPTGNPSVKVP 342
           V A  Y    S V+  LNS  Q   P G P   +P
Sbjct: 97  VAAQFYHQAASAVVDPLNSCSQPAAPGGQPIPDIP 131


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = +1

Query: 238 VMAT*YT*IQSMVLYSLNSLPQAQRPTGNPSVKVP 342
           V A  Y    S V+  LNS  Q   P G P   +P
Sbjct: 156 VAAQFYHQAASAVVDPLNSCSQPAAPGGQPIPDIP 190


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = +1

Query: 238 VMAT*YT*IQSMVLYSLNSLPQAQRPTGNPSVKVP 342
           V A  Y    S V+  LNS  Q   P G P   +P
Sbjct: 97  VAAQFYHQAASAVVDPLNSCSQPAAPGGQPIPDIP 131


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = +1

Query: 238 VMAT*YT*IQSMVLYSLNSLPQAQRPTGNPSVKVP 342
           V A  Y    S V+  LNS  Q   P G P   +P
Sbjct: 156 VAAQFYHQAASAVVDPLNSCSQPAAPGGQPIPDIP 190


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,829
Number of Sequences: 336
Number of extensions: 3470
Number of successful extensions: 19
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)