Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11m03f
         (616 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    25   1.5  
DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.       23   7.8  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    23   7.8  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    23   7.8  

>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +2

Query: 155 RIHSAQGQTAQGRNHIQQIETAARLWTVSWRHD 253
           R+HS +G  A  +   ++ ET    W  +W  D
Sbjct: 868 RVHSRRGTAAGAQLRKEERETTIAEWQATWDSD 900


>DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.
          Length = 508

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -1

Query: 586 PTGGRSVLYHSGQDQIRESVIFINLRFSLKN 494
           P   R   Y SGQ  +R SV  + L   L+N
Sbjct: 296 PKTERGAFYVSGQPPVRSSVNMMFLTKELRN 326


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -2

Query: 498 KTIFHPSVFQLNQKLCTIANLLHLPLEHQ 412
           K  FHP+   LN  L T   +    LEH+
Sbjct: 296 KRDFHPTGCSLNNLLSTNRKVYEFGLEHE 324


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -2

Query: 498 KTIFHPSVFQLNQKLCTIANLLHLPLEHQ 412
           K  FHP+   LN  L T   +    LEH+
Sbjct: 296 KRDFHPTGCSLNNLLSTNRKVYEFGLEHE 324


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 694,061
Number of Sequences: 2352
Number of extensions: 15996
Number of successful extensions: 24
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)