Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11m02f
(568 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_44930| Best HMM Match : PCMT (HMM E-Value=3.1e-09) 165 3e-41
SB_4910| Best HMM Match : HECT (HMM E-Value=5.8e-33) 96 2e-20
SB_45710| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_31503| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_50369| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_47490| Best HMM Match : WSC (HMM E-Value=1e-06) 29 3.5
SB_54730| Best HMM Match : RdRP (HMM E-Value=0) 28 4.6
SB_2676| Best HMM Match : Kelch_1 (HMM E-Value=0) 28 4.6
SB_56107| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 28 6.1
SB_49359| Best HMM Match : rve (HMM E-Value=5.5e-37) 28 6.1
SB_47603| Best HMM Match : RVP (HMM E-Value=0.95) 28 6.1
SB_42176| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 28 6.1
SB_40370| Best HMM Match : rve (HMM E-Value=1.3e-37) 28 6.1
SB_39098| Best HMM Match : EGF (HMM E-Value=5.2e-07) 28 6.1
SB_21567| Best HMM Match : RVT_1 (HMM E-Value=6.4e-18) 28 6.1
SB_13300| Best HMM Match : RVP (HMM E-Value=1.5) 28 6.1
SB_39602| Best HMM Match : rve (HMM E-Value=1.4e-38) 28 6.1
SB_37359| Best HMM Match : RVT_1 (HMM E-Value=3.5e-18) 28 6.1
SB_23087| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_21706| Best HMM Match : RVT_1 (HMM E-Value=6.6e-19) 28 6.1
SB_16657| Best HMM Match : RVT_1 (HMM E-Value=6.4e-18) 28 6.1
SB_9047| Best HMM Match : RVT_1 (HMM E-Value=3.4e-19) 28 6.1
SB_2088| Best HMM Match : DUF104 (HMM E-Value=9.7) 28 6.1
SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_26926| Best HMM Match : DUF104 (HMM E-Value=9.7) 27 8.1
>SB_44930| Best HMM Match : PCMT (HMM E-Value=3.1e-09)
Length = 283
Score = 165 bits (400), Expect = 3e-41
Identities = 72/112 (64%), Positives = 91/112 (81%)
Frame = +3
Query: 231 MGGAVSSGRDNNELIDNLMRGKYIRSAEVENVFRALDRADYMSSEVRDQAYKDLAWRNGS 410
MGGAVS+G+DNNEL++NL YI++ +VE VFR +DR DY + AYKDLAW+ +
Sbjct: 1 MGGAVSAGKDNNELVENLKEAGYIKTPKVEQVFREVDRCDYFPEGAEEHAYKDLAWKQKN 60
Query: 411 LHMSAPCIYSEVMEALELKTGLTFLNVGSGTGYLNTLVGLIIGTSGINHGIE 566
+H+SAPCIYSEVME LEL+ GL+FLN+GSGTGYL+T+VGLIIG SG NHG+E
Sbjct: 61 VHLSAPCIYSEVMECLELEEGLSFLNLGSGTGYLSTMVGLIIGPSGTNHGVE 112
>SB_4910| Best HMM Match : HECT (HMM E-Value=5.8e-33)
Length = 958
Score = 96.3 bits (229), Expect = 2e-20
Identities = 48/100 (48%), Positives = 67/100 (67%), Gaps = 1/100 (1%)
Frame = +3
Query: 270 LIDNLMRGKYIRSAEVENVFRALDRADYMSSEVRDQAYKDLAWRNGS-LHMSAPCIYSEV 446
++D + I S EVE+ FRA+ R ++ E+ ++AY D R +HMSAP +Y+ V
Sbjct: 1 MVDKFVHTGIITSKEVEDAFRAVPRGAFVPPELYEEAYYDQPLRGDPHIHMSAPHMYAGV 60
Query: 447 MEALELKTGLTFLNVGSGTGYLNTLVGLIIGTSGINHGIE 566
+EAL+L GL+FLNVGSGTGY + LVG II + INHG+E
Sbjct: 61 LEALDLCPGLSFLNVGSGTGYFSCLVGYIIKRNSINHGVE 100
>SB_45710| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 258 DNNELIDNLMRGKYIRSAEVENVFRALDRADYMSS-EVRDQAYKDL 392
+N+E++ + KY R + FR LDR D S E R +A KDL
Sbjct: 17 NNDEVVVDKKSKKYRRIVRRKAAFRYLDRVDAKQSLEARREANKDL 62
>SB_31503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 534
Score = 29.5 bits (63), Expect = 2.0
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Frame = +3
Query: 225 LKMGGAVSSGRDNNELIDNLMRGKYIRSAEVENVFRALDRADYMSSEVR-DQAYKDLAWR 401
LK+G V+S ++ I+ + K A+ NVF L + ++ DQ K +A
Sbjct: 387 LKVGVQVNSCSSDSSAINTQLNSKAALKAKFPNVFHGLGKLKGFKLKLHIDQNIKPVAQP 446
Query: 402 NGSLHMSAPCIYSEVMEALELKTGLTFLNVGSGTGYLNTLVGL 530
+ S ++ +E LE K G+ V S T ++N LV +
Sbjct: 447 LRRIPFSRRQKVADKLEELE-KLGVV-EKVNSPTSWINPLVAV 487
>SB_50369| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 403
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = -2
Query: 324 RSPLPRNGCICL---SSGCQSTHYYHALNSLHLPFLMILFY 211
+SPLPRN C+ L CQS L+S+ L LM + Y
Sbjct: 195 QSPLPRNDCLQLLGYLKKCQSLEVDGRLDSVTLMVLMAMLY 235
>SB_47490| Best HMM Match : WSC (HMM E-Value=1e-06)
Length = 114
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 325 YSGHSIVPITCLQKYGIR-RIRTLPGGMDLCICQH 426
Y H I PI CL++ GI+ + L G LC+C +
Sbjct: 62 YDPHDISPIRCLEQCGIKYKYAALQDGR-LCLCSN 95
>SB_54730| Best HMM Match : RdRP (HMM E-Value=0)
Length = 658
Score = 28.3 bits (60), Expect = 4.6
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +3
Query: 504 GYLNTLVGLIIGTSGINHG 560
GYLNT + +++ SG++HG
Sbjct: 264 GYLNTQITMLLADSGVDHG 282
>SB_2676| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 645
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/51 (23%), Positives = 27/51 (52%)
Frame = +3
Query: 405 GSLHMSAPCIYSEVMEALELKTGLTFLNVGSGTGYLNTLVGLIIGTSGINH 557
G ++S Y M+A E+ ++ + + SG G + + ++ G +G++H
Sbjct: 440 GPSYLSTVERYDPSMDAWEMMPAMSMVRINSGVGVVAGCLYIVGGHNGVSH 490
>SB_56107| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 508
Score = 27.9 bits (59), Expect = 6.1
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Frame = +3
Query: 225 LKMGGAVSSGRDNNELIDNLMRGKYIRSAEVENVFRALDRADYMSSEVR-DQAYKDLAWR 401
LK+G V+S + I+ + K A+ NVF L + ++ DQ K +A
Sbjct: 326 LKVGVQVNSCSSDFSAINTQLNSKAALKAKFPNVFHGLGKLKGFKLKLHIDQNIKPVAQP 385
Query: 402 NGSLHMSAPCIYSEVMEALELKTGLTFLNVGSGTGYLNTLVGL 530
+ S ++ +E LE K G+ V S T ++N LV +
Sbjct: 386 LRRIPFSRRQKVADKLEELE-KLGVV-EKVNSPTSWINPLVAV 426
>SB_49359| Best HMM Match : rve (HMM E-Value=5.5e-37)
Length = 971
Score = 27.9 bits (59), Expect = 6.1
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Frame = +3
Query: 225 LKMGGAVSSGRDNNELIDNLMRGKYIRSAEVENVFRALDRADYMSSEVR-DQAYKDLAWR 401
LK+G V+S + I+ + K A+ NVF L + ++ DQ K +A
Sbjct: 316 LKVGVQVNSCSSDFSAINTQLNSKAALKAKFPNVFHGLGKLKGFKLKLHIDQNIKPVAQP 375
Query: 402 NGSLHMSAPCIYSEVMEALELKTGLTFLNVGSGTGYLNTLVGL 530
+ S ++ +E LE K G+ V S T ++N LV +
Sbjct: 376 LRRIPFSRRQKVADKLEKLE-KLGVV-EKVNSPTSWINPLVAV 416
>SB_47603| Best HMM Match : RVP (HMM E-Value=0.95)
Length = 286
Score = 27.9 bits (59), Expect = 6.1
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Frame = +3
Query: 225 LKMGGAVSSGRDNNELIDNLMRGKYIRSAEVENVFRALDRADYMSSEVR-DQAYKDLAWR 401
LK+G V+S + I+ + K A+ NVF L + ++ DQ K +A
Sbjct: 160 LKVGVQVNSCSSDFSAINTQLNSKAALKAKFPNVFHGLGKLKGFKLKLHIDQNIKPVAQP 219
Query: 402 NGSLHMSAPCIYSEVMEALELKTGLTFLNVGSGTGYLNTLVGL 530
+ S ++ +E LE K G+ V S T ++N LV +
Sbjct: 220 LRRIPFSRRQKVADKLEELE-KLGVV-EKVNSPTSWINPLVAV 260
>SB_42176| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 612
Score = 27.9 bits (59), Expect = 6.1
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Frame = +3
Query: 225 LKMGGAVSSGRDNNELIDNLMRGKYIRSAEVENVFRALDRADYMSSEVR-DQAYKDLAWR 401
LK+G V+S + I+ + K A+ NVF L + ++ DQ K +A
Sbjct: 397 LKVGVQVNSCSSDFSAINTQLNSKAALKAKFPNVFHGLGKLKGFKLKLHIDQNIKPVAQP 456
Query: 402 NGSLHMSAPCIYSEVMEALELKTGLTFLNVGSGTGYLNTLVGL 530
+ S ++ +E LE K G+ V S T ++N LV +
Sbjct: 457 LRRIPFSRRQKVADKLEELE-KLGVV-EKVNSPTSWINPLVAV 497
>SB_40370| Best HMM Match : rve (HMM E-Value=1.3e-37)
Length = 1393
Score = 27.9 bits (59), Expect = 6.1
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Frame = +3
Query: 225 LKMGGAVSSGRDNNELIDNLMRGKYIRSAEVENVFRALDRADYMSSEVR-DQAYKDLAWR 401
LK+G V+S + I+ + K A+ NVF L + ++ DQ K +A
Sbjct: 442 LKVGVQVNSCSSDFSAINTQLNSKAALKAKFPNVFHGLGKLKGFKLKLHIDQNIKPVAQP 501
Query: 402 NGSLHMSAPCIYSEVMEALELKTGLTFLNVGSGTGYLNTLVGL 530
+ S ++ +E LE K G+ V S T ++N LV +
Sbjct: 502 LRRIPFSRRQKVADKLEELE-KLGVV-EKVNSPTSWINPLVAV 542
>SB_39098| Best HMM Match : EGF (HMM E-Value=5.2e-07)
Length = 577
Score = 27.9 bits (59), Expect = 6.1
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Frame = +3
Query: 225 LKMGGAVSSGRDNNELIDNLMRGKYIRSAEVENVFRALDRADYMSSEVR-DQAYKDLAWR 401
LK+G V+S + I+ + K A+ NVF L + ++ DQ K +A
Sbjct: 308 LKVGVQVNSCSSDFSAINTQLNSKAALKAKFPNVFHGLGKLKGFKLKLHIDQNIKPVAQP 367
Query: 402 NGSLHMSAPCIYSEVMEALELKTGLTFLNVGSGTGYLNTLVGL 530
+ S ++ +E LE K G+ V S T ++N LV +
Sbjct: 368 LRRIPFSRRQKVADKLEELE-KLGVV-EKVNSPTSWINPLVAV 408
>SB_21567| Best HMM Match : RVT_1 (HMM E-Value=6.4e-18)
Length = 296
Score = 27.9 bits (59), Expect = 6.1
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Frame = +3
Query: 225 LKMGGAVSSGRDNNELIDNLMRGKYIRSAEVENVFRALDRADYMSSEVR-DQAYKDLAWR 401
LK+G V+S + I+ + K A+ NVF L + ++ DQ K +A
Sbjct: 11 LKVGVQVNSCSSDFSAINTQLNSKAALKAKFPNVFHGLGKLKGFKLKLHIDQNIKPVAQP 70
Query: 402 NGSLHMSAPCIYSEVMEALELKTGLTFLNVGSGTGYLNTLVGL 530
+ S ++ +E LE K G+ V S T ++N LV +
Sbjct: 71 LRRIPFSRRQKVADKLEELE-KLGVV-EKVNSPTSWINPLVAV 111
>SB_13300| Best HMM Match : RVP (HMM E-Value=1.5)
Length = 286
Score = 27.9 bits (59), Expect = 6.1
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Frame = +3
Query: 225 LKMGGAVSSGRDNNELIDNLMRGKYIRSAEVENVFRALDRADYMSSEVR-DQAYKDLAWR 401
LK+G V+S + I+ + K A+ NVF L + ++ DQ K +A
Sbjct: 160 LKVGVQVNSCSSDFSAINTQLNSKAALKAKFPNVFHGLGKLKGFKLKLHIDQNIKPVAQP 219
Query: 402 NGSLHMSAPCIYSEVMEALELKTGLTFLNVGSGTGYLNTLVGL 530
+ S ++ +E LE K G+ V S T ++N LV +
Sbjct: 220 LRRIPFSRRQKVADKLEELE-KLGVV-EKVNSPTSWINPLVAV 260
>SB_39602| Best HMM Match : rve (HMM E-Value=1.4e-38)
Length = 523
Score = 27.9 bits (59), Expect = 6.1
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Frame = +3
Query: 225 LKMGGAVSSGRDNNELIDNLMRGKYIRSAEVENVFRALDRADYMSSEVR-DQAYKDLAWR 401
LK+G V+S + I+ + K A+ NVF L + ++ DQ K +A
Sbjct: 39 LKVGVQVNSCSSDFSAINTQLNSKAALKAKFPNVFHGLGKLKGFKLKLHIDQNIKPVAQP 98
Query: 402 NGSLHMSAPCIYSEVMEALELKTGLTFLNVGSGTGYLNTLVGL 530
+ S ++ +E LE K G+ V S T ++N LV +
Sbjct: 99 LRRIPFSRRQKVADKLEELE-KLGVV-EKVNSPTSWINPLVAV 139
>SB_37359| Best HMM Match : RVT_1 (HMM E-Value=3.5e-18)
Length = 435
Score = 27.9 bits (59), Expect = 6.1
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Frame = +3
Query: 225 LKMGGAVSSGRDNNELIDNLMRGKYIRSAEVENVFRALDRADYMSSEVR-DQAYKDLAWR 401
LK+G V+S + I+ + K A+ NVF L + ++ DQ K +A
Sbjct: 39 LKVGVQVNSCSSDFSAINTQLNSKAALKAKFPNVFHGLGKLKGFKLKLHIDQNIKPVAQP 98
Query: 402 NGSLHMSAPCIYSEVMEALELKTGLTFLNVGSGTGYLNTLVGL 530
+ S ++ +E LE K G+ V S T ++N LV +
Sbjct: 99 LRRIPFSRRQKVADKLEELE-KLGVV-EKVNSPTSWINPLVAV 139
>SB_23087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 437
Score = 27.9 bits (59), Expect = 6.1
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 367 YGIRRIRTLPGGMDLCICQH 426
Y +R +RT GGMD +C H
Sbjct: 323 YAMRSVRTWRGGMDRALCVH 342
>SB_21706| Best HMM Match : RVT_1 (HMM E-Value=6.6e-19)
Length = 323
Score = 27.9 bits (59), Expect = 6.1
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Frame = +3
Query: 225 LKMGGAVSSGRDNNELIDNLMRGKYIRSAEVENVFRALDRADYMSSEVR-DQAYKDLAWR 401
LK+G V+S + I+ + K A+ NVF L + ++ DQ K +A
Sbjct: 39 LKVGVQVNSCSSDFSAINTQLNSKAALKAKFPNVFHGLGKLKGFKLKLHIDQNIKPVAQP 98
Query: 402 NGSLHMSAPCIYSEVMEALELKTGLTFLNVGSGTGYLNTLVGL 530
+ S ++ +E LE K G+ V S T ++N LV +
Sbjct: 99 LRRIPFSRRQKVADKLEELE-KLGVV-EKVNSPTSWINPLVAV 139
>SB_16657| Best HMM Match : RVT_1 (HMM E-Value=6.4e-18)
Length = 1138
Score = 27.9 bits (59), Expect = 6.1
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Frame = +3
Query: 225 LKMGGAVSSGRDNNELIDNLMRGKYIRSAEVENVFRALDRADYMSSEVR-DQAYKDLAWR 401
LK+G V+S + I+ + K A+ NVF L + ++ DQ K +A
Sbjct: 348 LKVGVQVNSCSSDFSAINTQLNSKAALKAKFPNVFHGLGKLKGFKLKLHIDQNIKPVAQP 407
Query: 402 NGSLHMSAPCIYSEVMEALELKTGLTFLNVGSGTGYLNTLVGL 530
+ S ++ +E LE K G+ V S T ++N LV +
Sbjct: 408 LRRIPFSRRQKVADKLEELE-KLGVV-EKVNSPTSWINPLVAV 448
>SB_9047| Best HMM Match : RVT_1 (HMM E-Value=3.4e-19)
Length = 1116
Score = 27.9 bits (59), Expect = 6.1
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Frame = +3
Query: 225 LKMGGAVSSGRDNNELIDNLMRGKYIRSAEVENVFRALDRADYMSSEVR-DQAYKDLAWR 401
LK+G V+S + I+ + K A+ NVF L + ++ DQ K +A
Sbjct: 355 LKVGVQVNSCSSDFSAINTQLNSKAALKAKFPNVFHGLGKLKGFKLKLHIDQNIKPVAQP 414
Query: 402 NGSLHMSAPCIYSEVMEALELKTGLTFLNVGSGTGYLNTLVGL 530
+ S ++ +E LE K G+ V S T ++N LV +
Sbjct: 415 LRRIPFSRRQKVADKLEELE-KLGVV-EKVNSPTSWINPLVAV 455
>SB_2088| Best HMM Match : DUF104 (HMM E-Value=9.7)
Length = 221
Score = 27.9 bits (59), Expect = 6.1
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Frame = +3
Query: 225 LKMGGAVSSGRDNNELIDNLMRGKYIRSAEVENVFRALDRADYMSSEVR-DQAYKDLAWR 401
LK+G V+S + I+ + K A+ NVF L + ++ DQ K +A
Sbjct: 39 LKVGVQVNSCSSDFSAINTQLNSKAALKAKFPNVFHGLGKLKGFKLKLHIDQNIKPVAQP 98
Query: 402 NGSLHMSAPCIYSEVMEALELKTGLTFLNVGSGTGYLNTLVGL 530
+ S ++ +E LE K G+ V S T ++N LV +
Sbjct: 99 LRRIPFSRRQKVADKLEELE-KLGVV-EKVNSPTSWINPLVAV 139
>SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4529
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -1
Query: 562 MP*FMPEVPIIRPTKVFK*PVPEPTFRKVKPVFSSRASIT 443
MP MP P+ RP V P PE RK + S+ S+T
Sbjct: 2783 MPGMMPIQPLQRPEGVAPSPKPEKPQRKPRARAKSKDSLT 2822
>SB_26926| Best HMM Match : DUF104 (HMM E-Value=9.7)
Length = 254
Score = 27.5 bits (58), Expect = 8.1
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Frame = +3
Query: 225 LKMGGAVSSGRDNNELIDNLMRGKYIRSAEVENVFRALDRADYMSSEVR-DQAYKDLAWR 401
LK+G V+S + I+ + K A+ NVF L + ++ DQ K +A
Sbjct: 39 LKVGVQVNSCSSDFAAINTQLNSKAALKAKFPNVFHGLGKLKGFKLKLHIDQNIKPVAQP 98
Query: 402 NGSLHMSAPCIYSEVMEALELKTGLTFLNVGSGTGYLNTLVGL 530
+ S ++ +E LE K G+ V S T ++N LV +
Sbjct: 99 LRRIPFSRRQKVADKLEELE-KLGVV-EKVNSPTSWINPLVAV 139
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,271,320
Number of Sequences: 59808
Number of extensions: 357074
Number of successful extensions: 909
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 908
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1337207630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -