Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11m02f
         (568 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    25   1.3  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    25   1.3  
AJ459962-1|CAD31061.1|  685|Anopheles gambiae prophenoloxidase 9...    24   3.0  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   4.0  
AY745213-1|AAU93480.1|  171|Anopheles gambiae cytochrome P450 pr...    23   5.3  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    23   5.3  
AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450 CY...    23   6.9  
AY146752-1|AAO12067.1|  277|Anopheles gambiae odorant-binding pr...    23   9.2  
AY146751-1|AAO12066.1|  277|Anopheles gambiae odorant-binding pr...    23   9.2  

>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +2

Query: 488 RRLWDRLLEHLGWSD 532
           +RL ++ L HLGWSD
Sbjct: 5   QRLCEKCLAHLGWSD 19


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +2

Query: 488 RRLWDRLLEHLGWSD 532
           +RL ++ L HLGWSD
Sbjct: 5   QRLCEKCLAHLGWSD 19


>AJ459962-1|CAD31061.1|  685|Anopheles gambiae prophenoloxidase 9
           protein.
          Length = 685

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -1

Query: 553 FMPEVPIIRPTKVFK*PVPEPTFRKV 476
           F   +P ++P K  + P+PE  F K+
Sbjct: 250 FCNRLPAVKPLKNLREPIPEAYFPKL 275


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 12/17 (70%), Positives = 12/17 (70%)
 Frame = +2

Query: 485 ERRLWDRLLEHLGWSDN 535
           ER L DRL EHL  SDN
Sbjct: 508 ERLLLDRLNEHLEDSDN 524


>AY745213-1|AAU93480.1|  171|Anopheles gambiae cytochrome P450
           protein.
          Length = 171

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -3

Query: 419 HMQRSIPPGKVLIRLIPYF*RHVIGTIECPEYVL 318
           +++R I   + L  +   + R  IGTI+  EYV+
Sbjct: 103 YLERVIKESQRLCPVAAVYGRKTIGTIQLDEYVI 136


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
 Frame = +2

Query: 455 PRT-ENRLNFPERRLWDRLLE 514
           PRT E  ++ P+R LW R +E
Sbjct: 429 PRTFEEAMSCPDRDLWKRAME 449


>AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450
           CYPm3r9 protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 384 YTPDPVLLKTCNRHDRVPGIRSPL 313
           Y P PV L+  ++   VPG +S L
Sbjct: 367 YPPVPVHLRVASKDYHVPGTKSVL 390


>AY146752-1|AAO12067.1|  277|Anopheles gambiae odorant-binding
           protein AgamOBP35 protein.
          Length = 277

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 10/28 (35%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -3

Query: 347 GTIE-CPEYVLHFRGTDVFASHQVVNQL 267
           GT+  CPEYV  + G D+  ++ + + L
Sbjct: 138 GTLTTCPEYVPSYYGEDLQLAYDLFDML 165


>AY146751-1|AAO12066.1|  277|Anopheles gambiae odorant-binding
           protein AgamOBP36 protein.
          Length = 277

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 10/28 (35%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -3

Query: 347 GTIE-CPEYVLHFRGTDVFASHQVVNQL 267
           GT+  CPEYV  + G D+  ++ + + L
Sbjct: 138 GTLTTCPEYVPSYYGEDLQLAYDLFDML 165


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 588,629
Number of Sequences: 2352
Number of extensions: 12292
Number of successful extensions: 24
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53404389
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)