Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11m02f
         (568 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U43737-1|AAA86272.2|  226|Drosophila melanogaster isoaspartyl me...    42   8e-04
U37432-1|AAA80540.2|  226|Drosophila melanogaster protein D-aspa...    42   8e-04
AY075527-1|AAL68334.1|  226|Drosophila melanogaster RE74472p pro...    42   8e-04
AY070630-1|AAL48101.1|  226|Drosophila melanogaster RE73839p pro...    42   8e-04
AE014297-269|AAF52012.1|  226|Drosophila melanogaster CG2152-PA ...    42   8e-04
BT011561-1|AAS15697.1|  407|Drosophila melanogaster AT16019p pro...    29   5.8  
AE014134-2258|AAF53224.1|  407|Drosophila melanogaster CG15483-P...    29   5.8  

>U43737-1|AAA86272.2|  226|Drosophila melanogaster isoaspartyl
           methyltransferase protein.
          Length = 226

 Score = 41.5 bits (93), Expect = 8e-04
 Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
 Frame = +3

Query: 246 SSGRDNNELIDNLMRGKYIRSAEVENVFRALDRADYMSSEVRDQAYKDLAWRNGSLHMSA 425
           S G +N +LI  L     I S  V    +  DR  Y        A + +    G + +SA
Sbjct: 5   SVGANNEDLIRQLKDHGVIASDAVAQAMKETDRKHYSPRNPYMDAPQPIG---GGVTISA 61

Query: 426 PCIYSEVMEALE--LKTGLTFLNVGSGTGYLNTLVGLIIGTSGIN 554
           P +++  +E L   LK G   L+VGSG+GYL       I   G++
Sbjct: 62  PHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVD 106


>U37432-1|AAA80540.2|  226|Drosophila melanogaster protein
           D-aspartyl, L-isoaspartylmethyltransferase protein.
          Length = 226

 Score = 41.5 bits (93), Expect = 8e-04
 Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
 Frame = +3

Query: 246 SSGRDNNELIDNLMRGKYIRSAEVENVFRALDRADYMSSEVRDQAYKDLAWRNGSLHMSA 425
           S G +N +LI  L     I S  V    +  DR  Y        A + +    G + +SA
Sbjct: 5   SVGANNEDLIRQLKDHGVIASDAVAQAMKETDRKHYSPRNPYMDAPQPIG---GGVTISA 61

Query: 426 PCIYSEVMEALE--LKTGLTFLNVGSGTGYLNTLVGLIIGTSGIN 554
           P +++  +E L   LK G   L+VGSG+GYL       I   G++
Sbjct: 62  PHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVD 106


>AY075527-1|AAL68334.1|  226|Drosophila melanogaster RE74472p
           protein.
          Length = 226

 Score = 41.5 bits (93), Expect = 8e-04
 Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
 Frame = +3

Query: 246 SSGRDNNELIDNLMRGKYIRSAEVENVFRALDRADYMSSEVRDQAYKDLAWRNGSLHMSA 425
           S G +N +LI  L     I S  V    +  DR  Y        A + +    G + +SA
Sbjct: 5   SVGANNEDLIRQLKDHGVIASDAVAQAMKETDRKHYSPRNPYMDAPQPIG---GGVTISA 61

Query: 426 PCIYSEVMEALE--LKTGLTFLNVGSGTGYLNTLVGLIIGTSGIN 554
           P +++  +E L   LK G   L+VGSG+GYL       I   G++
Sbjct: 62  PHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVD 106


>AY070630-1|AAL48101.1|  226|Drosophila melanogaster RE73839p
           protein.
          Length = 226

 Score = 41.5 bits (93), Expect = 8e-04
 Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
 Frame = +3

Query: 246 SSGRDNNELIDNLMRGKYIRSAEVENVFRALDRADYMSSEVRDQAYKDLAWRNGSLHMSA 425
           S G +N +LI  L     I S  V    +  DR  Y        A + +    G + +SA
Sbjct: 5   SVGANNEDLIRQLKDHGVIASDAVAQAMKETDRKHYSPRNPYMDAPQPIG---GGVTISA 61

Query: 426 PCIYSEVMEALE--LKTGLTFLNVGSGTGYLNTLVGLIIGTSGIN 554
           P +++  +E L   LK G   L+VGSG+GYL       I   G++
Sbjct: 62  PHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVD 106


>AE014297-269|AAF52012.1|  226|Drosophila melanogaster CG2152-PA
           protein.
          Length = 226

 Score = 41.5 bits (93), Expect = 8e-04
 Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
 Frame = +3

Query: 246 SSGRDNNELIDNLMRGKYIRSAEVENVFRALDRADYMSSEVRDQAYKDLAWRNGSLHMSA 425
           S G +N +LI  L     I S  V    +  DR  Y        A + +    G + +SA
Sbjct: 5   SVGANNEDLIRQLKDHGVIASDAVAQAMKETDRKHYSPRNPYMDAPQPIG---GGVTISA 61

Query: 426 PCIYSEVMEALE--LKTGLTFLNVGSGTGYLNTLVGLIIGTSGIN 554
           P +++  +E L   LK G   L+VGSG+GYL       I   G++
Sbjct: 62  PHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVD 106


>BT011561-1|AAS15697.1|  407|Drosophila melanogaster AT16019p
           protein.
          Length = 407

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +2

Query: 386 GPCLEEWISAYVSTVYLQ*SNGSPRTENRLNF 481
           GP LEEWI+A V +  L   N   R+EN  N+
Sbjct: 283 GPNLEEWINASVVSKELNVFNVGHRSENNNNW 314


>AE014134-2258|AAF53224.1|  407|Drosophila melanogaster CG15483-PA
           protein.
          Length = 407

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +2

Query: 386 GPCLEEWISAYVSTVYLQ*SNGSPRTENRLNF 481
           GP LEEWI+A V +  L   N   R+EN  N+
Sbjct: 283 GPNLEEWINASVVSKELNVFNVGHRSENNNNW 314


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,185,358
Number of Sequences: 53049
Number of extensions: 534857
Number of successful extensions: 1363
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1363
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2213979693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)