Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11m01r
(686 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 4.8
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 4.8
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 4.8
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 4.8
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 4.8
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 4.8
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 6.3
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 21 8.3
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 8.3
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 8.3
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 21 8.3
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 21 8.3
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 4.8
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 476 HYQRQRSSLQGRDRAY 429
HY R+RS + R+R Y
Sbjct: 230 HYSRERSCSRDRNREY 245
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 4.8
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 476 HYQRQRSSLQGRDRAY 429
HY R+RS + R+R Y
Sbjct: 230 HYSRERSCSRDRNREY 245
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 4.8
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 476 HYQRQRSSLQGRDRAY 429
HY R+RS + R+R Y
Sbjct: 230 HYSRERSCSRDRNREY 245
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 4.8
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 476 HYQRQRSSLQGRDRAY 429
HY R+RS + R+R Y
Sbjct: 230 HYSRERSCSRDRNREY 245
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.2 bits (45), Expect = 4.8
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 476 HYQRQRSSLQGRDRAY 429
HY R+RS + R+R Y
Sbjct: 219 HYSRERSCSRDRNREY 234
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.2 bits (45), Expect = 4.8
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 476 HYQRQRSSLQGRDRAY 429
HY R+RS + R+R Y
Sbjct: 230 HYSRERSCSRDRNREY 245
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.8 bits (44), Expect = 6.3
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -1
Query: 536 QRYPQRFRYREVHQ-QGEQDHHYQRQRSSLQGRDR 435
+RY R R RE + + E+++ R+RS + RDR
Sbjct: 270 KRY-SRSREREQNSYKNEREYRKYRERSKERSRDR 303
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.4 bits (43), Expect = 8.3
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -3
Query: 684 ITNPEYSSKYLR 649
I N YSSKY+R
Sbjct: 201 IVNTNYSSKYMR 212
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.3
Identities = 17/89 (19%), Positives = 35/89 (39%), Gaps = 2/89 (2%)
Frame = -2
Query: 508 EKSTNKENKITITNDKG--RLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSM 335
E+S +++ D+ +L E+ + + + RN +++E KN E +
Sbjct: 1 ERSCSRDRNREYRKDRRYEKLHNEKEKLLEERTNRKRNSRSREREQNSYKNEREYRKYRE 60
Query: 334 KSTMEDEKLKEKISDSDKQTILDKCNDTI 248
S E+ + + I N+TI
Sbjct: 61 TSKERSRDRTERERSREPKIISSLSNNTI 89
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.3
Identities = 17/89 (19%), Positives = 35/89 (39%), Gaps = 2/89 (2%)
Frame = -2
Query: 508 EKSTNKENKITITNDKG--RLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSM 335
E+S +++ D+ +L E+ + + + RN +++E KN E +
Sbjct: 1 ERSCSRDRNREYRKDRRYEKLHNEKEKLLEERTNRKRNSRSREREQNSYKNEREYRKYRE 60
Query: 334 KSTMEDEKLKEKISDSDKQTILDKCNDTI 248
S E+ + + I N+TI
Sbjct: 61 TSKERSRDRAERERSREPKIISSLSNNTI 89
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 21.4 bits (43), Expect = 8.3
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = -2
Query: 334 KSTMEDEKLKEKISDSDKQTILDKCN 257
+ +++ EK+K +S +T+ KCN
Sbjct: 331 RCSVKREKIKISVSYPSTETLNTKCN 356
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3
Query: 573 PRGAGGIPVS 602
PRG GG+P S
Sbjct: 399 PRGPGGVPTS 408
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,807
Number of Sequences: 438
Number of extensions: 4032
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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