BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11l22r
(772 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF181634-1|AAD55420.1| 558|Drosophila melanogaster BcDNA.GH0645... 355 4e-98
AE014134-3050|AAF53768.1| 558|Drosophila melanogaster CG10687-P... 355 4e-98
AY071089-1|AAL48711.1| 460|Drosophila melanogaster RE15573p pro... 89 6e-18
AE013599-2392|AAF57921.1| 460|Drosophila melanogaster CG6796-PA... 89 6e-18
AY070532-1|AAL48003.1| 531|Drosophila melanogaster GM14334p pro... 71 2e-12
AE013599-1606|AAF58445.1| 531|Drosophila melanogaster CG3821-PA... 71 2e-12
AF113612-1|AAD21582.1| 531|Drosophila melanogaster aspartyl tRN... 69 7e-12
AY119180-1|AAM51040.1| 1082|Drosophila melanogaster SD02215p pro... 43 5e-04
AE014134-2794|AAF53577.3| 1082|Drosophila melanogaster CG31739-P... 43 5e-04
AY089547-1|AAL90285.1| 574|Drosophila melanogaster LD23509p pro... 36 0.046
AE014298-1351|AAF46510.2| 607|Drosophila melanogaster CG12141-P... 36 0.046
AE014298-1350|AAN09255.1| 574|Drosophila melanogaster CG12141-P... 36 0.046
AE014298-1753|AAF48147.2| 1860|Drosophila melanogaster CG2750-PA... 29 5.3
AE014134-2346|AAF53298.1| 1906|Drosophila melanogaster CG7099-PA... 29 5.3
AF053091-1|AAC06254.1| 2715|Drosophila melanogaster eyelid protein. 29 7.1
AE014297-2398|AAN13750.1| 2716|Drosophila melanogaster CG7467-PB... 29 7.1
AE014297-2396|AAF55457.1| 2703|Drosophila melanogaster CG7467-PA... 29 7.1
>AF181634-1|AAD55420.1| 558|Drosophila melanogaster BcDNA.GH06451
protein.
Length = 558
Score = 355 bits (873), Expect = 4e-98
Identities = 161/238 (67%), Positives = 187/238 (78%)
Frame = -1
Query: 760 LGDVYCIAQSYRAEQFRTRRHLAEYSHVEAECPFITFXXXXXXXXXXXXXXXXXXXXSPE 581
LGDV+ I+QSYRAEQ RTRRHLAEY+HVEAECPF+TF SP
Sbjct: 321 LGDVFTISQSYRAEQSRTRRHLAEYTHVEAECPFLTFDDLLDRLEDLVCDVVDRVLKSPW 380
Query: 580 GQLVYELXXXXXXXXXXXKRMTYIEAIEYLRANNITKEDGSFYEFGEDIPEMPERKMTDA 401
G LV EL +RM Y +AI++L+ NN+TK+DG+FYEFGEDIPE PERKMTD
Sbjct: 381 GYLVKELNPDFKPPQKPFRRMNYEDAIKWLKENNVTKDDGTFYEFGEDIPEAPERKMTDT 440
Query: 400 IGVPILLCKFPAEIKSXYMSRCVDDRRLTESVDVLMPGVGEIVGGSMRIWDHEELMEGYK 221
I PI+LC+FPAEIKS YM RC +D+RLTESVDVL+P VGEIVGGSMRI+D EEL++GYK
Sbjct: 441 INEPIMLCRFPAEIKSFYMQRCKEDQRLTESVDVLLPNVGEIVGGSMRIYDSEELLKGYK 500
Query: 220 REGIDPSPYYWYTDQRKFGSVPHGGYGLGLERFLCWLLDRYHIRDVCLYPRFLERCTP 47
REGIDP PYYWYTDQR +G++PHGGYGLGLERFLCWLL+RYHIR+VCLYPRFL+RC P
Sbjct: 501 REGIDPQPYYWYTDQRVYGTMPHGGYGLGLERFLCWLLNRYHIREVCLYPRFLDRCRP 558
>AE014134-3050|AAF53768.1| 558|Drosophila melanogaster CG10687-PA
protein.
Length = 558
Score = 355 bits (873), Expect = 4e-98
Identities = 161/238 (67%), Positives = 187/238 (78%)
Frame = -1
Query: 760 LGDVYCIAQSYRAEQFRTRRHLAEYSHVEAECPFITFXXXXXXXXXXXXXXXXXXXXSPE 581
LGDV+ I+QSYRAEQ RTRRHLAEY+HVEAECPF+TF SP
Sbjct: 321 LGDVFTISQSYRAEQSRTRRHLAEYTHVEAECPFLTFDDLLDRLEDLVCDVVDRVLKSPW 380
Query: 580 GQLVYELXXXXXXXXXXXKRMTYIEAIEYLRANNITKEDGSFYEFGEDIPEMPERKMTDA 401
G LV EL +RM Y +AI++L+ NN+TK+DG+FYEFGEDIPE PERKMTD
Sbjct: 381 GYLVKELNPDFKPPQKPFRRMNYEDAIKWLKENNVTKDDGTFYEFGEDIPEAPERKMTDT 440
Query: 400 IGVPILLCKFPAEIKSXYMSRCVDDRRLTESVDVLMPGVGEIVGGSMRIWDHEELMEGYK 221
I PI+LC+FPAEIKS YM RC +D+RLTESVDVL+P VGEIVGGSMRI+D EEL++GYK
Sbjct: 441 INEPIMLCRFPAEIKSFYMQRCKEDQRLTESVDVLLPNVGEIVGGSMRIYDSEELLKGYK 500
Query: 220 REGIDPSPYYWYTDQRKFGSVPHGGYGLGLERFLCWLLDRYHIRDVCLYPRFLERCTP 47
REGIDP PYYWYTDQR +G++PHGGYGLGLERFLCWLL+RYHIR+VCLYPRFL+RC P
Sbjct: 501 REGIDPQPYYWYTDQRVYGTMPHGGYGLGLERFLCWLLNRYHIREVCLYPRFLDRCRP 558
>AY071089-1|AAL48711.1| 460|Drosophila melanogaster RE15573p
protein.
Length = 460
Score = 89.0 bits (211), Expect = 6e-18
Identities = 67/242 (27%), Positives = 104/242 (42%), Gaps = 6/242 (2%)
Frame = -1
Query: 760 LGDVYCIAQSYRAEQFRTRRHLAEYSHVEAECPFITFXXXXXXXXXXXXXXXXXXXXSPE 581
LG Y ++ ++RAE ++ HLAE+ EAE +
Sbjct: 223 LGKTYTLSPAFRAENSKSPLHLAEFYMFEAELAHLEEMEKLAQFIEQMLKSVTNRLLETS 282
Query: 580 GQ-LVYELXXXXXXXXXXXKR-----MTYIEAIEYLRANNITKEDGSFYEFGEDIPEMPE 419
G+ L + + M+Y EA++ L+ N + + E + E
Sbjct: 283 GEDLSFCQRNSNSNSDLPWLQVPWKIMSYDEALQVLQENKDSLKTP--ISLNEGFSKDQE 340
Query: 418 RKMTDAIGVPILLCKFPAEIKSXYMSRCVDDRRLTESVDVLMPGVGEIVGGSMRIWDHEE 239
+ G P+ + +PA+ K YM + ++D+LMP VGE+ GGS+R D
Sbjct: 341 LFLVAHCGAPVFVVDWPAQQKPFYMKVSRSNPNRVHALDLLMPAVGELCGGSLRESDPAI 400
Query: 238 LMEGYKREGIDPSPYYWYTDQRKFGSVPHGGYGLGLERFLCWLLDRYHIRDVCLYPRFLE 59
L K P WY D RK+G VP GG+G+G ER+L + +IRDV +PR+
Sbjct: 401 L----KSHPHLPKDLEWYVDLRKYGGVPTGGFGMGFERYLQLVTGVKNIRDVIPFPRYPH 456
Query: 58 RC 53
C
Sbjct: 457 SC 458
>AE013599-2392|AAF57921.1| 460|Drosophila melanogaster CG6796-PA
protein.
Length = 460
Score = 89.0 bits (211), Expect = 6e-18
Identities = 67/242 (27%), Positives = 104/242 (42%), Gaps = 6/242 (2%)
Frame = -1
Query: 760 LGDVYCIAQSYRAEQFRTRRHLAEYSHVEAECPFITFXXXXXXXXXXXXXXXXXXXXSPE 581
LG Y ++ ++RAE ++ HLAE+ EAE +
Sbjct: 223 LGKTYTLSPAFRAENSKSPLHLAEFYMFEAELAHLEEMEKLAQFIEQMLKSVTNRLLETS 282
Query: 580 GQ-LVYELXXXXXXXXXXXKR-----MTYIEAIEYLRANNITKEDGSFYEFGEDIPEMPE 419
G+ L + + M+Y EA++ L+ N + + E + E
Sbjct: 283 GEDLSFCQRNSNSNSDLPWLQVPWKIMSYDEALQVLQENKDSLKTP--ISLNEGFSKDQE 340
Query: 418 RKMTDAIGVPILLCKFPAEIKSXYMSRCVDDRRLTESVDVLMPGVGEIVGGSMRIWDHEE 239
+ G P+ + +PA+ K YM + ++D+LMP VGE+ GGS+R D
Sbjct: 341 LFLVAHCGAPVFVVDWPAQQKPFYMKVSRSNPNRVHALDLLMPAVGELCGGSLRESDPAI 400
Query: 238 LMEGYKREGIDPSPYYWYTDQRKFGSVPHGGYGLGLERFLCWLLDRYHIRDVCLYPRFLE 59
L K P WY D RK+G VP GG+G+G ER+L + +IRDV +PR+
Sbjct: 401 L----KSHPHLPKDLEWYVDLRKYGGVPTGGFGMGFERYLQLVTGVKNIRDVIPFPRYPH 456
Query: 58 RC 53
C
Sbjct: 457 SC 458
>AY070532-1|AAL48003.1| 531|Drosophila melanogaster GM14334p
protein.
Length = 531
Score = 70.5 bits (165), Expect = 2e-12
Identities = 41/113 (36%), Positives = 60/113 (53%)
Frame = -1
Query: 385 LLCKFPAEIKSXYMSRCVDDRRLTESVDVLMPGVGEIVGGSMRIWDHEELMEGYKREGID 206
+L KFP I+ Y ++ + S D+ M G EI+ G+ RI D E L+E K GID
Sbjct: 420 ILDKFPLAIRPFYTMPDPNNPVYSNSYDMFMRGE-EILSGAQRIHDPEYLIERAKHHGID 478
Query: 205 PSPYYWYTDQRKFGSVPHGGYGLGLERFLCWLLDRYHIRDVCLYPRFLERCTP 47
S Y + ++G PH G G+G+ER + L +IR ++PR +R TP
Sbjct: 479 TSKIAAYIESFRYGCPPHAGGGIGMERVVMLYLGLDNIRKTSMFPRDPKRLTP 531
Score = 32.3 bits (70), Expect = 0.76
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -1
Query: 772 VSGDLGDVYCIAQSYRAEQFRTRRHLAEYSHVEAECPF 659
++ D VY + +RAE T RHL E+ ++ E F
Sbjct: 288 IAADFDKVYTVGAVFRAEDSNTHRHLTEFVGLDLEMAF 325
>AE013599-1606|AAF58445.1| 531|Drosophila melanogaster CG3821-PA
protein.
Length = 531
Score = 70.5 bits (165), Expect = 2e-12
Identities = 41/113 (36%), Positives = 60/113 (53%)
Frame = -1
Query: 385 LLCKFPAEIKSXYMSRCVDDRRLTESVDVLMPGVGEIVGGSMRIWDHEELMEGYKREGID 206
+L KFP I+ Y ++ + S D+ M G EI+ G+ RI D E L+E K GID
Sbjct: 420 ILDKFPLAIRPFYTMPDPNNPVYSNSYDMFMRGE-EILSGAQRIHDPEYLIERAKHHGID 478
Query: 205 PSPYYWYTDQRKFGSVPHGGYGLGLERFLCWLLDRYHIRDVCLYPRFLERCTP 47
S Y + ++G PH G G+G+ER + L +IR ++PR +R TP
Sbjct: 479 TSKIAAYIESFRYGCPPHAGGGIGMERVVMLYLGLDNIRKTSMFPRDPKRLTP 531
Score = 32.3 bits (70), Expect = 0.76
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -1
Query: 772 VSGDLGDVYCIAQSYRAEQFRTRRHLAEYSHVEAECPF 659
++ D VY + +RAE T RHL E+ ++ E F
Sbjct: 288 IAADFDKVYTVGAVFRAEDSNTHRHLTEFVGLDLEMAF 325
>AF113612-1|AAD21582.1| 531|Drosophila melanogaster aspartyl tRNA
synthetase protein.
Length = 531
Score = 68.9 bits (161), Expect = 7e-12
Identities = 41/113 (36%), Positives = 59/113 (52%)
Frame = -1
Query: 385 LLCKFPAEIKSXYMSRCVDDRRLTESVDVLMPGVGEIVGGSMRIWDHEELMEGYKREGID 206
+L KFP I+ Y ++ + S D+ M G EI+ G+ RI D E L+E K GID
Sbjct: 420 ILDKFPLAIRPFYTMPDPNNPVYSNSYDMFMRGE-EILSGAQRIHDPEYLIERAKHHGID 478
Query: 205 PSPYYWYTDQRKFGSVPHGGYGLGLERFLCWLLDRYHIRDVCLYPRFLERCTP 47
S Y + ++G PH G G+G+ER + L +IR + PR +R TP
Sbjct: 479 TSKIAAYIESFRYGCPPHAGGGIGMERVVMLYLGLDNIRKTSMLPRDPKRLTP 531
Score = 32.3 bits (70), Expect = 0.76
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -1
Query: 772 VSGDLGDVYCIAQSYRAEQFRTRRHLAEYSHVEAECPF 659
++ D VY + +RAE T RHL E+ ++ E F
Sbjct: 288 IAADFDKVYTVGAVFRAEDSNTHRHLTEFVGLDLEMAF 325
>AY119180-1|AAM51040.1| 1082|Drosophila melanogaster SD02215p protein.
Length = 1082
Score = 42.7 bits (96), Expect = 5e-04
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Frame = -1
Query: 316 TESVDVLMPGVGEIVGGSMRIWDHEELMEGYKREGIDPSPYYWYT---DQRKFGSVPHGG 146
+++ D+++ G E+ GGS+RI D + M+ + E I P+ + + G PHGG
Sbjct: 875 SQAYDLVLNGQ-EVGGGSIRIHDRD--MQHFILEQILKIPHDHLSHLLSALESGCPPHGG 931
Query: 145 YGLGLERFLCWLLDRYHIRDVCLYPRFLERCTP--*APLP 32
LGL+R + L IRDV +P+ L P AP+P
Sbjct: 932 IALGLDRLIAILCRARSIRDVIAFPKSLNGRDPLSNAPVP 971
>AE014134-2794|AAF53577.3| 1082|Drosophila melanogaster CG31739-PA
protein.
Length = 1082
Score = 42.7 bits (96), Expect = 5e-04
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Frame = -1
Query: 316 TESVDVLMPGVGEIVGGSMRIWDHEELMEGYKREGIDPSPYYWYT---DQRKFGSVPHGG 146
+++ D+++ G E+ GGS+RI D + M+ + E I P+ + + G PHGG
Sbjct: 875 SQAYDLVLNGQ-EVGGGSIRIHDRD--MQHFILEQILKIPHDHLSHLLSALESGCPPHGG 931
Query: 145 YGLGLERFLCWLLDRYHIRDVCLYPRFLERCTP--*APLP 32
LGL+R + L IRDV +P+ L P AP+P
Sbjct: 932 IALGLDRLIAILCRARSIRDVIAFPKSLNGRDPLSNAPVP 971
>AY089547-1|AAL90285.1| 574|Drosophila melanogaster LD23509p
protein.
Length = 574
Score = 36.3 bits (80), Expect = 0.046
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = -1
Query: 172 KFGSVPHGGYGLGLERFLCWLLDRYHIRDVCLYP 71
++G P GG+G+G++R +L D +I++V L+P
Sbjct: 521 EYGLPPTGGFGMGIDRLAMFLTDSNNIKEVLLFP 554
>AE014298-1351|AAF46510.2| 607|Drosophila melanogaster CG12141-PB,
isoform B protein.
Length = 607
Score = 36.3 bits (80), Expect = 0.046
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = -1
Query: 172 KFGSVPHGGYGLGLERFLCWLLDRYHIRDVCLYP 71
++G P GG+G+G++R +L D +I++V L+P
Sbjct: 554 EYGLPPTGGFGMGIDRLAMFLTDSNNIKEVLLFP 587
>AE014298-1350|AAN09255.1| 574|Drosophila melanogaster CG12141-PA,
isoform A protein.
Length = 574
Score = 36.3 bits (80), Expect = 0.046
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = -1
Query: 172 KFGSVPHGGYGLGLERFLCWLLDRYHIRDVCLYP 71
++G P GG+G+G++R +L D +I++V L+P
Sbjct: 521 EYGLPPTGGFGMGIDRLAMFLTDSNNIKEVLLFP 554
>AE014298-1753|AAF48147.2| 1860|Drosophila melanogaster CG2750-PA
protein.
Length = 1860
Score = 29.5 bits (63), Expect = 5.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 88 PGCGTGPGASRGSAPNPARSRREAPS 165
P CG G+SRG +P P S R S
Sbjct: 1202 PSCGENTGSSRGFSPMPLESTRRGAS 1227
>AE014134-2346|AAF53298.1| 1906|Drosophila melanogaster CG7099-PA
protein.
Length = 1906
Score = 29.5 bits (63), Expect = 5.3
Identities = 21/67 (31%), Positives = 32/67 (47%)
Frame = -1
Query: 472 KEDGSFYEFGEDIPEMPERKMTDAIGVPILLCKFPAEIKSXYMSRCVDDRRLTESVDVLM 293
K+ G E+ E + + + + A+G L K K RC D+ +TES DVL+
Sbjct: 410 KKHGLVKEYSEQVGKSRQFRFV-AVGHLGDLSKEDEIKKKALEIRCKDEPNITESTDVLL 468
Query: 292 PGVGEIV 272
+ EIV
Sbjct: 469 KDLPEIV 475
>AF053091-1|AAC06254.1| 2715|Drosophila melanogaster eyelid protein.
Length = 2715
Score = 29.1 bits (62), Expect = 7.1
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 88 PGCGTGPGASRGSAPNPARSRREAPSRTCAGP 183
PG GTGPG +G P A A GP
Sbjct: 1224 PGSGTGPGPGQGPGPGAASGGAGAVGAVGGGP 1255
>AE014297-2398|AAN13750.1| 2716|Drosophila melanogaster CG7467-PB,
isoform B protein.
Length = 2716
Score = 29.1 bits (62), Expect = 7.1
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 88 PGCGTGPGASRGSAPNPARSRREAPSRTCAGP 183
PG GTGPG +G P A A GP
Sbjct: 1225 PGSGTGPGPGQGPGPGAASGGAGAVGAVGGGP 1256
>AE014297-2396|AAF55457.1| 2703|Drosophila melanogaster CG7467-PA,
isoform A protein.
Length = 2703
Score = 29.1 bits (62), Expect = 7.1
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 88 PGCGTGPGASRGSAPNPARSRREAPSRTCAGP 183
PG GTGPG +G P A A GP
Sbjct: 1212 PGSGTGPGPGQGPGPGAASGGAGAVGAVGGGP 1243
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,928,113
Number of Sequences: 53049
Number of extensions: 602475
Number of successful extensions: 2365
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2344
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -