Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11l22f
(625 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0015 - 20234231-20234344,20234846-20234902,20234968-202351... 33 0.18
02_05_0226 + 26971851-26972034,26972734-26972834,26972876-269729... 33 0.24
02_01_0316 + 2125283-2125687,2125768-2125881,2125986-2126099,212... 32 0.32
01_07_0254 + 42318181-42319471,42319581-42319792,42319909-423201... 32 0.32
06_03_1108 - 27661916-27662812,27662889-27663529,27663613-276645... 31 0.56
01_01_0367 + 2872650-2873045,2873800-2873940,2874255-2874364,287... 31 0.56
12_01_0193 + 1436165-1437247 31 0.98
10_02_0053 + 4607915-4608635,4609422-4609681,4609984-4610028 31 0.98
01_04_0038 - 15339047-15339230,15339683-15339741,15340031-153401... 31 0.98
10_07_0023 + 11962629-11962733,11963156-11963521 30 1.3
11_06_0123 + 20334350-20334553,20335059-20335490,20336052-203361... 30 1.7
01_07_0132 - 41298184-41298558,41298648-41298729,41298850-412989... 29 2.3
09_01_0018 - 391827-392254,392553-392608,393976-394005,394666-39... 29 3.0
05_05_0348 + 24271764-24271898,24273055-24273144,24273205-242733... 29 3.0
03_02_1010 - 13194002-13194339,13194421-13194573,13194661-131948... 29 3.0
08_02_1473 - 27358162-27358275,27358968-27359024,27359102-273592... 29 4.0
08_02_0299 + 15487202-15487227,15487369-15487491,15488277-154883... 29 4.0
10_08_0425 - 17806117-17806401,17806862-17806984,17807076-178072... 28 5.2
01_06_1424 - 37269397-37270299 28 6.9
07_03_1784 - 29492511-29492804,29492913-29492999,29493076-294932... 27 9.2
>09_06_0015 -
20234231-20234344,20234846-20234902,20234968-20235111,
20235581-20235745,20235817-20236005,20236086-20236326,
20236412-20236512,20236704-20237241,20238101-20238132,
20238677-20238760
Length = 554
Score = 33.1 bits (72), Expect = 0.18
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +1
Query: 301 DDTKDYDVAAKSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQEDPSL 480
D K+ +++L+++++ RE A++K K EEE K+ +E + L + SL
Sbjct: 406 DQEKELKALQEAELRRLEETAARE--AALEKQKQEEEERRKKQLEEEELESSLASKQASL 463
Query: 481 P 483
P
Sbjct: 464 P 464
>02_05_0226 +
26971851-26972034,26972734-26972834,26972876-26972978,
26973335-26973477,26973525-26973605,26973929-26974015,
26974097-26974239,26974746-26974896,26974973-26975095,
26975362-26975445,26975531-26975718,26976726-26976900,
26977008-26977129,26977231-26977310,26977532-26977590,
26977921-26978075,26978680-26978858,26980050-26980162,
26980243-26980413,26980552-26980680,26980756-26980856,
26980942-26981059,26981739-26981818,26983230-26983302,
26983865-26983950,26984025-26984076,26984221-26984352,
26984560-26984628,26984912-26985004,26985806-26985901,
26986710-26986808,26986894-26986986,26987459-26987608,
26988391-26988549
Length = 1323
Score = 32.7 bits (71), Expect = 0.24
Identities = 20/70 (28%), Positives = 33/70 (47%)
Frame = +1
Query: 343 KKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQEDPSLPKATVVKICETTEH 522
K+ +K W N +A+ +A + EK+ D+AK+ + +ED + K E +
Sbjct: 178 KERKKKWDEHNQEAISEALKQLNEFEKKHSKSDDAKQKMAREDLQSRLEYLRKQAEGYDD 237
Query: 523 RGQRICIRGW 552
RG I I W
Sbjct: 238 RGPVIDIVAW 247
>02_01_0316 +
2125283-2125687,2125768-2125881,2125986-2126099,
2126271-2126561,2126658-2126768,2127317-2127370,
2127555-2127634,2127912-2128027,2128141-2128382
Length = 508
Score = 32.3 bits (70), Expect = 0.32
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 526 GQRICIRGWVHRLRRXGKSLAFLTLRDGTGYLQ 624
G+ + +RG H +R G+ +AFL LR G+ +Q
Sbjct: 54 GRAVRVRGAAHAVRAVGRRVAFLVLRQGSSTVQ 86
>01_07_0254 +
42318181-42319471,42319581-42319792,42319909-42320132,
42320232-42321009
Length = 834
Score = 32.3 bits (70), Expect = 0.32
Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Frame = +1
Query: 262 GKEPFPTIYVDSKDDTKDYDVAAKSQ-LKKIQKI--WVRENYKAMDKAKAEEENTEKRSQ 432
GK P ++V S D + ++ +K++ LK I + V E K +K ++ + S+
Sbjct: 674 GKLGAPPVFVISNDWLQVIEMVSKNEVLKTIDQFSKLVHEYKKTQEKEHRQKRKADHASR 733
Query: 433 NLDEAKKILLQEDPSLPKATVVKICETTEH 522
+ ++ +K+L +E +V + E T H
Sbjct: 734 DYNKRRKVLQRELGLSTSLDMVAVMENTHH 763
>06_03_1108 -
27661916-27662812,27662889-27663529,27663613-27664592,
27664854-27664934,27668582-27668634,27669294-27669308,
27670069-27670296
Length = 964
Score = 31.5 bits (68), Expect = 0.56
Identities = 13/54 (24%), Positives = 25/54 (46%)
Frame = -2
Query: 273 WLFASMMHCFQYCLEWFLFRTITCIVIAILIRGIYLGQAKVSNVRHVERLLTNY 112
W F + CF L++FL ++A ++ G + + NV +E ++ Y
Sbjct: 344 WSFGKLALCFALLLQFFLLDLAAADIVAFVVAGFHQCRYGYKNVADLEGVVAGY 397
>01_01_0367 +
2872650-2873045,2873800-2873940,2874255-2874364,
2875279-2875390,2875959-2876030,2876605-2876696,
2877116-2877236,2877712-2877834,2877935-2878130,
2878221-2878408,2878553-2878624,2879336-2879434,
2880027-2880107,2880337-2880405,2880730-2880787,
2881181-2881347
Length = 698
Score = 31.5 bits (68), Expect = 0.56
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +1
Query: 526 GQRICIRGWVHRLRRXGKSLAFLTLRDGTGYLQ 624
G+R+ + GWV L R L FLTLRD +G +Q
Sbjct: 101 GRRVRLCGWV-ALHRAHAGLTFLTLRDRSGTVQ 132
>12_01_0193 + 1436165-1437247
Length = 360
Score = 30.7 bits (66), Expect = 0.98
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +1
Query: 367 RENYKAMDKAKAEEENTEKRSQNLDEAKKILLQEDPSLPKATVVKICETTEHR 525
+E KA KA E ++ N D A+ IL + S+P +TV K C T+ R
Sbjct: 43 QEKEKARQKAIRAE--IKRFRANQDAAEAILRKRKASMPPSTVTKFCTDTDLR 93
>10_02_0053 + 4607915-4608635,4609422-4609681,4609984-4610028
Length = 341
Score = 30.7 bits (66), Expect = 0.98
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -1
Query: 505 IFSQQWPLVNLDPLAEESSLPHLSF 431
IF+QQW L+NLD A E + L F
Sbjct: 151 IFNQQWKLINLDLSANEKEVAMLDF 175
>01_04_0038 -
15339047-15339230,15339683-15339741,15340031-15340160,
15340248-15340498,15340632-15341225,15342050-15342511
Length = 559
Score = 30.7 bits (66), Expect = 0.98
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +1
Query: 526 GQRICIRGWVHRLRRXGK-SLAFLTLRDGT 612
G+R+ + GWV R GK + AFL L DG+
Sbjct: 40 GERVVVGGWVKTGREQGKGTFAFLELNDGS 69
>10_07_0023 + 11962629-11962733,11963156-11963521
Length = 156
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/78 (23%), Positives = 31/78 (39%), Gaps = 8/78 (10%)
Frame = +1
Query: 361 WVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQEDPSLPKATVVK--------ICETT 516
W E + + + TE + LD K L ++ ++P+ TV +C
Sbjct: 67 WSEEQLQTRQRDMHNVKETEMLAAKLDLLMKRLDDQEKNMPQGTVKALDSHITCGVCSNA 126
Query: 517 EHRGQRICIRGWVHRLRR 570
+H G + GW R+ R
Sbjct: 127 DHSGTSVVDNGWYGRIFR 144
>11_06_0123 +
20334350-20334553,20335059-20335490,20336052-20336191,
20336281-20336401,20337110-20337250,20337421-20337663
Length = 426
Score = 29.9 bits (64), Expect = 1.7
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +1
Query: 265 KEPFPTIYVDSKDDTKDYDVAAKSQLKK--IQKIWVRENYKAMDKAKAEEENTEKRSQNL 438
KE T V SKD+ + D A +S+LKK +Q + E + + E+T+K +
Sbjct: 133 KEVSDTPVVPSKDNEEQTDNADESKLKKQRVQDPPISEQTEPKEPTDKPTESTDKPKGSN 192
Query: 439 DEAKKILLQED 471
D+ L+ ED
Sbjct: 193 DKPIDDLIDED 203
>01_07_0132 -
41298184-41298558,41298648-41298729,41298850-41298977,
41299059-41299157,41299279-41299434,41300709-41300783,
41301962-41302137,41303210-41303252,41303336-41303503,
41303584-41303731,41306316-41306587
Length = 573
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Frame = +1
Query: 418 EKRSQNLDEAKKILLQ--EDPSLPKAT---VVKICETTEHRGQRICIRGWVHRLRRXGK 579
E S +L E ++IL + + P P T VVK+C+ R R+ G V L++ G+
Sbjct: 431 EDDSPDLSEVRRILREHLKIPDAPLKTRRLVVKVCDIVTRRAARLAAAGIVGILKKLGR 489
>09_01_0018 -
391827-392254,392553-392608,393976-394005,394666-394736,
394819-394948,397627-397717,397798-397919,398014-398303
Length = 405
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +1
Query: 244 KAMHHAGKEPFPTIYVDSK-DDTKDYDVAAKSQLKKIQKIWVRENYKAMD-KAKAEEENT 417
K H F +VD DD D + + L +IQK WV E ++ + A E++
Sbjct: 129 KIRHKLSDGKFTLTHVDEFIDDLLTKDYSCDTALPRIQKRWVLETSGTLEPRRSALEDDF 188
Query: 418 EKRSQNLDEAKKILLQE 468
E+ ++ ++ + + + E
Sbjct: 189 EEEEEDKEDEQPMDIDE 205
>05_05_0348 +
24271764-24271898,24273055-24273144,24273205-24273303,
24273725-24273826,24273912-24274088,24274193-24274398,
24274491-24274575,24274641-24274798,24274873-24274948,
24275117-24275245,24275313-24275457,24275561-24275691,
24276183-24276335,24276447-24276636,24277006-24277139,
24277248-24277406,24277659-24277964,24278040-24278216,
24278446-24278529,24278592-24278822,24278913-24279002,
24279090-24279211,24279293-24279448,24279477-24279635,
24279705-24279765,24280004-24280138,24280384-24280471,
24280548-24280620,24280883-24280994,24281691-24281711
Length = 1327
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +1
Query: 298 KDDTKDYDVAAKSQLKKIQK--IWVRENYKAM-DKAKAEEENTEKRSQNLDEAKKILLQE 468
++D ++ + K Q K+ ++ + RE+ K + K K E+ TEK + +DE+ K + +
Sbjct: 375 QEDLENNMKSCKDQFKEFERKDVKYREDLKHLKQKIKKLEDKTEKDTSKIDESTKEVEES 434
Query: 469 DPSLPK 486
+P+
Sbjct: 435 SSLIPQ 440
>03_02_1010 -
13194002-13194339,13194421-13194573,13194661-13194809,
13194932-13195184,13195282-13195469,13195684-13195841,
13196093-13196307,13196410-13196614
Length = 552
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/76 (25%), Positives = 30/76 (39%)
Frame = +1
Query: 301 DDTKDYDVAAKSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQEDPSL 480
DD + D +AK KK K +DK + E ++ + KK L+E+P
Sbjct: 440 DDGEKVDASAKKSKKKKSKAEADGEAMDLDKPSNVADEAEPGTEKKKKKKKHKLEEEPQE 499
Query: 481 PKATVVKICETTEHRG 528
+ +V E G
Sbjct: 500 QEKSVAHANGDAEENG 515
>08_02_1473 -
27358162-27358275,27358968-27359024,27359102-27359245,
27359770-27359934,27360020-27360208,27360301-27360535,
27360826-27360932,27361020-27361103,27361185-27361695,
27361793-27361854,27363373-27363456
Length = 583
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +1
Query: 301 DDTKDYDVAAKSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQEDPSL 480
D K+ +++L++++ RE A+ K K EEE ++ +E + L + SL
Sbjct: 435 DREKELKAEQEAELRRLEAAAERE--AAIAKQKQEEEEKRRKQLEEEELESKLAAKQASL 492
Query: 481 PK 486
PK
Sbjct: 493 PK 494
>08_02_0299 +
15487202-15487227,15487369-15487491,15488277-15488397,
15488572-15488700,15489954-15490063,15490139-15490322,
15491155-15491346,15492190-15492411,15492501-15492687,
15494009-15494103
Length = 462
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 289 VDSKDDTKDYDVA-AKSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLD 441
+D K + KD +K K IQ +++ Y+A+ K + EEE K Q D
Sbjct: 347 LDEKSEVKDEKKQDSKEDEKSIQDEYIKAYYEALRKRQDEEEAKRKIQQEGD 398
>10_08_0425 - 17806117-17806401,17806862-17806984,17807076-17807222,
17807307-17807450,17808557-17808668,17808762-17808898,
17809016-17809156,17810921-17811004,17811275-17811742,
17811858-17811936,17812494-17812506,17813884-17814460,
17814502-17814774,17814899-17815045,17815354-17815413,
17816124-17816510
Length = 1058
Score = 28.3 bits (60), Expect = 5.2
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +1
Query: 244 KAMHHAGKE-PFPTIYVDSKDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKAKAEEENTE 420
KAM H +E F + K K+ + AAK++L + K+ +E + M K K EE
Sbjct: 838 KAMKHEEREVAFNEYIAELKSAEKEAEQAAKAKLDEQAKL--KEREREMRKRKEREEQEM 895
Query: 421 KR 426
+R
Sbjct: 896 ER 897
>01_06_1424 - 37269397-37270299
Length = 300
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 301 DDTKDYDVAAKSQLKKIQKI--WVRENYKAMDKAKAEEENTEKRSQNLDEAKK 453
DD K +AA + K ++ WV E A + A EE+ E + D+ KK
Sbjct: 230 DDDKQAGIAAMRRFKSGRRTASWVEEAIAAAEAAGEEEQQQENDAAADDDEKK 282
>07_03_1784 -
29492511-29492804,29492913-29492999,29493076-29493222,
29493522-29493690,29493777-29494015,29494111-29494356,
29494419-29495084
Length = 615
Score = 27.5 bits (58), Expect = 9.2
Identities = 17/70 (24%), Positives = 33/70 (47%)
Frame = +1
Query: 334 SQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQEDPSLPKATVVKICET 513
SQ+ K RE+ D+ + +EE +K Q+L K L+ PK T++ ++
Sbjct: 297 SQIHSATKHDQREDDDDTDEDEDDEEEEQKMQQHLAPQYKHLITIKAGKPKGTLLDALQS 356
Query: 514 TEHRGQRICI 543
+ +R+ +
Sbjct: 357 DPEKVRRLSL 366
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,207,517
Number of Sequences: 37544
Number of extensions: 282551
Number of successful extensions: 723
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 723
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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