Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11l22f
(625 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D84273-1|BAA34600.1| 548|Homo sapiens Asparaginyl tRNA Syntheta... 171 2e-42
BC001687-1|AAH01687.1| 548|Homo sapiens asparaginyl-tRNA synthe... 171 2e-42
AK222835-1|BAD96555.1| 548|Homo sapiens asparaginyl-tRNA synthe... 171 2e-42
AJ000334-1|CAA04008.1| 548|Homo sapiens asparaginyl-tRNA synthe... 171 2e-42
BC015031-1|AAH15031.1| 847|Homo sapiens matrin 3 protein. 32 1.9
AY007157-1|AAG02007.1| 407|Homo sapiens protein ( Homo sapiens ... 32 1.9
AF117236-1|AAF17217.1| 848|Homo sapiens matrin 3 protein. 32 1.9
AB018266-1|BAA34443.2| 853|Homo sapiens KIAA0723 protein protein. 32 1.9
AF269088-1|AAK27326.1| 1011|Homo sapiens breast cancer antigen N... 31 3.3
Z85987-1|CAI42222.1| 961|Homo sapiens FYVE, RhoGEF and PH domai... 31 4.4
U11690-1|AAA57004.1| 961|Homo sapiens FGD1 protein. 31 4.4
BC034530-1|AAH34530.1| 961|Homo sapiens FYVE, RhoGEF and PH dom... 31 4.4
Z84487-2|CAI42674.1| 2492|Homo sapiens alpha thalassemia/mental ... 30 5.8
Z84487-1|CAI42675.1| 2454|Homo sapiens alpha thalassemia/mental ... 30 5.8
U97103-1|AAC51657.1| 2375|Homo sapiens X-linked nuclear protein ... 30 5.8
U75653-1|AAC51655.1| 2492|Homo sapiens zinc finger helicase prot... 30 5.8
U72938-1|AAB49971.2| 2454|Homo sapiens putative DNA dependent AT... 30 5.8
U72937-1|AAB49970.2| 2492|Homo sapiens putative DNA dependent AT... 30 5.8
U72936-1|AAB49969.1| 2288|Homo sapiens putative DNA dependent AT... 30 5.8
U72935-3|AAB40700.1| 2288|Homo sapiens putative DNA dependent AT... 30 5.8
U72935-2|AAB40699.1| 2337|Homo sapiens putative DNA dependent AT... 30 5.8
U72935-1|AAB40698.1| 2375|Homo sapiens putative DNA dependent AT... 30 5.8
U09820-1|AAC50069.1| 1641|Homo sapiens helicase II protein. 30 5.8
L34363-1|AAA20872.1| 1298|Homo sapiens X-linked nuclear protein ... 30 5.8
L05500-1|AAA02907.1| 839|Homo sapiens adenylyl cyclase protein. 30 5.8
EF467914-1|ABO43036.1| 2492|Homo sapiens alpha thalassemia/menta... 30 5.8
AL121874-2|CAI40710.1| 2492|Homo sapiens alpha thalassemia/menta... 30 5.8
AL121874-1|CAB90351.2| 2454|Homo sapiens alpha thalassemia/menta... 30 5.8
AL109753-2|CAI43115.1| 2492|Homo sapiens alpha thalassemia/menta... 30 5.8
AL109753-1|CAI43116.1| 2454|Homo sapiens alpha thalassemia/menta... 30 5.8
AB209545-1|BAD92782.1| 1224|Homo sapiens transcriptional regulat... 30 5.8
AB209496-1|BAD92733.1| 1045|Homo sapiens brain adenylate cyclase... 30 5.8
AB102641-1|BAC81110.1| 2492|Homo sapiens ATRX protein. 30 5.8
BC114620-1|AAI14621.1| 1756|Homo sapiens periplakin protein. 30 7.6
AJ224874-1|CAA12175.1| 1966|Homo sapiens L-type calcium channel ... 30 7.6
AJ006216-1|CAA06916.1| 1966|Homo sapiens L-type calcium channel ... 30 7.6
AF201304-1|AAF15290.1| 1977|Homo sapiens voltage-gated L-type ca... 30 7.6
AF067227-1|AAD03587.1| 1912|Homo sapiens voltage-gated L-type ca... 30 7.6
AF041004-1|AAD17459.1| 1756|Homo sapiens periplakin protein. 30 7.6
AF013717-1|AAC39668.1| 1756|Homo sapiens periplakin protein. 30 7.6
AF001691-1|AAC17738.1| 1756|Homo sapiens 195 kDa cornified envel... 30 7.6
AB011140-1|BAA25494.1| 1426|Homo sapiens KIAA0568 protein protein. 30 7.6
>D84273-1|BAA34600.1| 548|Homo sapiens Asparaginyl tRNA Synthetase
protein.
Length = 548
Score = 171 bits (415), Expect = 2e-42
Identities = 82/155 (52%), Positives = 107/155 (69%)
Frame = +1
Query: 160 LSEIYTSXXXXXXXXXXXXXEKPFKTILKAMHHAGKEPFPTIYVDSKDDTKDYDVAAKSQ 339
L+E+Y S EKPFKT LKA+ GKEPFPTIYVDS+ + + ++V +KSQ
Sbjct: 3 LAELYVSDREGSDATGDGTKEKPFKTGLKALMTVGKEPFPTIYVDSQKENERWNVISKSQ 62
Query: 340 LKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQEDPSLPKATVVKICETTE 519
LK I+K+W RE K+ + K E E++ +R +NL+EAKKI ++ DPSLP+ VKI
Sbjct: 63 LKNIKKMWHREQMKSESREKKEAEDSLRREKNLEEAKKITIKNDPSLPEPKCVKIGALEG 122
Query: 520 HRGQRICIRGWVHRLRRXGKSLAFLTLRDGTGYLQ 624
+RGQR+ + GWVHRLRR GK+L FL LRDGTGYLQ
Sbjct: 123 YRGQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQ 157
>BC001687-1|AAH01687.1| 548|Homo sapiens asparaginyl-tRNA
synthetase protein.
Length = 548
Score = 171 bits (415), Expect = 2e-42
Identities = 82/155 (52%), Positives = 107/155 (69%)
Frame = +1
Query: 160 LSEIYTSXXXXXXXXXXXXXEKPFKTILKAMHHAGKEPFPTIYVDSKDDTKDYDVAAKSQ 339
L+E+Y S EKPFKT LKA+ GKEPFPTIYVDS+ + + ++V +KSQ
Sbjct: 3 LAELYVSDREGSDATGDGTKEKPFKTGLKALMTVGKEPFPTIYVDSQKENERWNVISKSQ 62
Query: 340 LKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQEDPSLPKATVVKICETTE 519
LK I+K+W RE K+ + K E E++ +R +NL+EAKKI ++ DPSLP+ VKI
Sbjct: 63 LKNIKKMWHREQMKSESREKKEAEDSLRREKNLEEAKKITIKNDPSLPEPKCVKIGALEG 122
Query: 520 HRGQRICIRGWVHRLRRXGKSLAFLTLRDGTGYLQ 624
+RGQR+ + GWVHRLRR GK+L FL LRDGTGYLQ
Sbjct: 123 YRGQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQ 157
>AK222835-1|BAD96555.1| 548|Homo sapiens asparaginyl-tRNA
synthetase variant protein.
Length = 548
Score = 171 bits (415), Expect = 2e-42
Identities = 82/155 (52%), Positives = 107/155 (69%)
Frame = +1
Query: 160 LSEIYTSXXXXXXXXXXXXXEKPFKTILKAMHHAGKEPFPTIYVDSKDDTKDYDVAAKSQ 339
L+E+Y S EKPFKT LKA+ GKEPFPTIYVDS+ + + ++V +KSQ
Sbjct: 3 LAELYVSDREGSDATGDGTKEKPFKTGLKALMTVGKEPFPTIYVDSQKENERWNVISKSQ 62
Query: 340 LKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQEDPSLPKATVVKICETTE 519
LK I+K+W RE K+ + K E E++ +R +NL+EAKKI ++ DPSLP+ VKI
Sbjct: 63 LKNIKKMWHREQMKSESREKKEAEDSLRREKNLEEAKKITIKNDPSLPEPKCVKIGALEG 122
Query: 520 HRGQRICIRGWVHRLRRXGKSLAFLTLRDGTGYLQ 624
+RGQR+ + GWVHRLRR GK+L FL LRDGTGYLQ
Sbjct: 123 YRGQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQ 157
>AJ000334-1|CAA04008.1| 548|Homo sapiens asparaginyl-tRNA
synthetase protein.
Length = 548
Score = 171 bits (415), Expect = 2e-42
Identities = 82/155 (52%), Positives = 107/155 (69%)
Frame = +1
Query: 160 LSEIYTSXXXXXXXXXXXXXEKPFKTILKAMHHAGKEPFPTIYVDSKDDTKDYDVAAKSQ 339
L+E+Y S EKPFKT LKA+ GKEPFPTIYVDS+ + + ++V +KSQ
Sbjct: 3 LAELYVSDREGSDATGDGTKEKPFKTGLKALMTVGKEPFPTIYVDSQKENERWNVISKSQ 62
Query: 340 LKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQEDPSLPKATVVKICETTE 519
LK I+K+W RE K+ + K E E++ +R +NL+EAKKI ++ DPSLP+ VKI
Sbjct: 63 LKNIKKMWHREQMKSESREKKEAEDSLRREKNLEEAKKITIKNDPSLPEPKCVKIGALEG 122
Query: 520 HRGQRICIRGWVHRLRRXGKSLAFLTLRDGTGYLQ 624
+RGQR+ + GWVHRLRR GK+L FL LRDGTGYLQ
Sbjct: 123 YRGQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQ 157
>BC015031-1|AAH15031.1| 847|Homo sapiens matrin 3 protein.
Length = 847
Score = 31.9 bits (69), Expect = 1.9
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Frame = +1
Query: 325 AAKSQLKKIQKIWV--RENYKAMDKAKAEEENTE---KRSQNLDEAKK 453
AAK +LKK+ KI +EN A++ EENTE + S+N D+ K
Sbjct: 709 AAKKKLKKVDKIEELDQENEAALENGIKNEENTEPGAESSENADDPNK 756
>AY007157-1|AAG02007.1| 407|Homo sapiens protein ( Homo sapiens
clone CDABP0107 mRNA sequence. ).
Length = 407
Score = 31.9 bits (69), Expect = 1.9
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Frame = +1
Query: 325 AAKSQLKKIQKIWV--RENYKAMDKAKAEEENTE---KRSQNLDEAKK 453
AAK +LKK+ KI +EN A++ EENTE + S+N D+ K
Sbjct: 269 AAKKKLKKVDKIEELDQENEAALENGIKNEENTEPGAESSENADDPNK 316
>AF117236-1|AAF17217.1| 848|Homo sapiens matrin 3 protein.
Length = 848
Score = 31.9 bits (69), Expect = 1.9
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Frame = +1
Query: 325 AAKSQLKKIQKIWV--RENYKAMDKAKAEEENTE---KRSQNLDEAKK 453
AAK +LKK+ KI +EN A++ EENTE + S+N D+ K
Sbjct: 710 AAKKKLKKVDKIEELDQENEAALENGIKNEENTEPGAESSENADDPNK 757
>AB018266-1|BAA34443.2| 853|Homo sapiens KIAA0723 protein protein.
Length = 853
Score = 31.9 bits (69), Expect = 1.9
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Frame = +1
Query: 325 AAKSQLKKIQKIWV--RENYKAMDKAKAEEENTE---KRSQNLDEAKK 453
AAK +LKK+ KI +EN A++ EENTE + S+N D+ K
Sbjct: 715 AAKKKLKKVDKIEELDQENEAALENGIKNEENTEPGAESSENADDPNK 762
>AF269088-1|AAK27326.1| 1011|Homo sapiens breast cancer antigen
NY-BR-1.1 protein.
Length = 1011
Score = 31.1 bits (67), Expect = 3.3
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Frame = +1
Query: 367 RENYKA--MDKAKAEEENTEKRSQNLDEAKKILLQEDPSLPKATVVKICET 513
RE +KA M +++++++ E+ S + + + LLQ D LPKAT K +T
Sbjct: 552 RETFKAAQMFPSESKQKDDEENSWDFESFLETLLQNDVCLPKATHQKEFDT 602
>Z85987-1|CAI42222.1| 961|Homo sapiens FYVE, RhoGEF and PH domain
containing 1 (faciogenital dysplasia) protein.
Length = 961
Score = 30.7 bits (66), Expect = 4.4
Identities = 17/65 (26%), Positives = 34/65 (52%)
Frame = +1
Query: 259 AGKEPFPTIYVDSKDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNL 438
+GK+ + ++++ KD+ A S L K ++ E +K ++ E+E+T S N+
Sbjct: 661 SGKQRSLELQARTEEEKKDWVQAINSTLLKHEQ--TLETFKLLNSTNREDEDTPPNSPNV 718
Query: 439 DEAKK 453
D K+
Sbjct: 719 DLGKR 723
>U11690-1|AAA57004.1| 961|Homo sapiens FGD1 protein.
Length = 961
Score = 30.7 bits (66), Expect = 4.4
Identities = 17/65 (26%), Positives = 34/65 (52%)
Frame = +1
Query: 259 AGKEPFPTIYVDSKDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNL 438
+GK+ + ++++ KD+ A S L K ++ E +K ++ E+E+T S N+
Sbjct: 661 SGKQRSLELQARTEEEKKDWVQAINSTLLKHEQ--TLETFKLLNSTNREDEDTPPNSPNV 718
Query: 439 DEAKK 453
D K+
Sbjct: 719 DLGKR 723
>BC034530-1|AAH34530.1| 961|Homo sapiens FYVE, RhoGEF and PH domain
containing 1 (faciogenital dysplasia) protein.
Length = 961
Score = 30.7 bits (66), Expect = 4.4
Identities = 17/65 (26%), Positives = 34/65 (52%)
Frame = +1
Query: 259 AGKEPFPTIYVDSKDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNL 438
+GK+ + ++++ KD+ A S L K ++ E +K ++ E+E+T S N+
Sbjct: 661 SGKQRSLELQARTEEEKKDWVQAINSTLLKHEQ--TLETFKLLNSTNREDEDTPPNSPNV 718
Query: 439 DEAKK 453
D K+
Sbjct: 719 DLGKR 723
>Z84487-2|CAI42674.1| 2492|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2492
Score = 30.3 bits (65), Expect = 5.8
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +1
Query: 337 QLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 471
Q KK ++I V+E+ + +K+ +EEE EK + +E ++ +ED
Sbjct: 1421 QKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEED 1465
>Z84487-1|CAI42675.1| 2454|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2454
Score = 30.3 bits (65), Expect = 5.8
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +1
Query: 337 QLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 471
Q KK ++I V+E+ + +K+ +EEE EK + +E ++ +ED
Sbjct: 1383 QKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEED 1427
>U97103-1|AAC51657.1| 2375|Homo sapiens X-linked nuclear protein
protein.
Length = 2375
Score = 30.3 bits (65), Expect = 5.8
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +1
Query: 337 QLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 471
Q KK ++I V+E+ + +K+ +EEE EK + +E ++ +ED
Sbjct: 1304 QKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEED 1348
>U75653-1|AAC51655.1| 2492|Homo sapiens zinc finger helicase protein.
Length = 2492
Score = 30.3 bits (65), Expect = 5.8
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +1
Query: 337 QLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 471
Q KK ++I V+E+ + +K+ +EEE EK + +E ++ +ED
Sbjct: 1421 QKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEED 1465
>U72938-1|AAB49971.2| 2454|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2454
Score = 30.3 bits (65), Expect = 5.8
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +1
Query: 337 QLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 471
Q KK ++I V+E+ + +K+ +EEE EK + +E ++ +ED
Sbjct: 1383 QKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEED 1427
>U72937-1|AAB49970.2| 2492|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2492
Score = 30.3 bits (65), Expect = 5.8
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +1
Query: 337 QLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 471
Q KK ++I V+E+ + +K+ +EEE EK + +E ++ +ED
Sbjct: 1421 QKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEED 1465
>U72936-1|AAB49969.1| 2288|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2288
Score = 30.3 bits (65), Expect = 5.8
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +1
Query: 337 QLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 471
Q KK ++I V+E+ + +K+ +EEE EK + +E ++ +ED
Sbjct: 1217 QKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEED 1261
>U72935-3|AAB40700.1| 2288|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2288
Score = 30.3 bits (65), Expect = 5.8
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +1
Query: 337 QLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 471
Q KK ++I V+E+ + +K+ +EEE EK + +E ++ +ED
Sbjct: 1217 QKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEED 1261
>U72935-2|AAB40699.1| 2337|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2337
Score = 30.3 bits (65), Expect = 5.8
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +1
Query: 337 QLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 471
Q KK ++I V+E+ + +K+ +EEE EK + +E ++ +ED
Sbjct: 1266 QKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEED 1310
>U72935-1|AAB40698.1| 2375|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2375
Score = 30.3 bits (65), Expect = 5.8
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +1
Query: 337 QLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 471
Q KK ++I V+E+ + +K+ +EEE EK + +E ++ +ED
Sbjct: 1304 QKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEED 1348
>U09820-1|AAC50069.1| 1641|Homo sapiens helicase II protein.
Length = 1641
Score = 30.3 bits (65), Expect = 5.8
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +1
Query: 337 QLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 471
Q KK ++I V+E+ + +K+ +EEE EK + +E ++ +ED
Sbjct: 562 QKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEED 606
>L34363-1|AAA20872.1| 1298|Homo sapiens X-linked nuclear protein
protein.
Length = 1298
Score = 30.3 bits (65), Expect = 5.8
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +1
Query: 337 QLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 471
Q KK ++I V+E+ + +K+ +EEE EK + +E ++ +ED
Sbjct: 301 QKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEED 345
>L05500-1|AAA02907.1| 839|Homo sapiens adenylyl cyclase protein.
Length = 839
Score = 30.3 bits (65), Expect = 5.8
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = -2
Query: 321 IIILSVIF*VN--INCGKWLFASMMHCFQYCLEWFLFRTITCIVIAILIRGIYLG 163
+++L ++F + + C +L + + CF CL RT+ CI I +LI + G
Sbjct: 356 VVLLLLVFCICFLVACVLYLHITRVQCFPGCLT-IQIRTVLCIFIVVLIYSVAQG 409
>EF467914-1|ABO43036.1| 2492|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked protein.
Length = 2492
Score = 30.3 bits (65), Expect = 5.8
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +1
Query: 337 QLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 471
Q KK ++I V+E+ + +K+ +EEE EK + +E ++ +ED
Sbjct: 1421 QKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEED 1465
>AL121874-2|CAI40710.1| 2492|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2492
Score = 30.3 bits (65), Expect = 5.8
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +1
Query: 337 QLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 471
Q KK ++I V+E+ + +K+ +EEE EK + +E ++ +ED
Sbjct: 1421 QKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEED 1465
>AL121874-1|CAB90351.2| 2454|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2454
Score = 30.3 bits (65), Expect = 5.8
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +1
Query: 337 QLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 471
Q KK ++I V+E+ + +K+ +EEE EK + +E ++ +ED
Sbjct: 1383 QKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEED 1427
>AL109753-2|CAI43115.1| 2492|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2492
Score = 30.3 bits (65), Expect = 5.8
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +1
Query: 337 QLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 471
Q KK ++I V+E+ + +K+ +EEE EK + +E ++ +ED
Sbjct: 1421 QKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEED 1465
>AL109753-1|CAI43116.1| 2454|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2454
Score = 30.3 bits (65), Expect = 5.8
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +1
Query: 337 QLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 471
Q KK ++I V+E+ + +K+ +EEE EK + +E ++ +ED
Sbjct: 1383 QKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEED 1427
>AB209545-1|BAD92782.1| 1224|Homo sapiens transcriptional regulator
ATRX isoform 1 variant protein.
Length = 1224
Score = 30.3 bits (65), Expect = 5.8
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +1
Query: 337 QLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 471
Q KK ++I V+E+ + +K+ +EEE EK + +E ++ +ED
Sbjct: 718 QKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEED 762
>AB209496-1|BAD92733.1| 1045|Homo sapiens brain adenylate cyclase 1
variant protein.
Length = 1045
Score = 30.3 bits (65), Expect = 5.8
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = -2
Query: 321 IIILSVIF*VN--INCGKWLFASMMHCFQYCLEWFLFRTITCIVIAILIRGIYLG 163
+++L ++F + + C +L + + CF CL RT+ CI I +LI + G
Sbjct: 623 VVLLLLVFCICFLVACVLYLHITRVQCFPGCLT-IQIRTVLCIFIVVLIYSVAQG 676
>AB102641-1|BAC81110.1| 2492|Homo sapiens ATRX protein.
Length = 2492
Score = 30.3 bits (65), Expect = 5.8
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +1
Query: 337 QLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 471
Q KK ++I V+E+ + +K+ +EEE EK + +E ++ +ED
Sbjct: 1421 QKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEED 1465
>BC114620-1|AAI14621.1| 1756|Homo sapiens periplakin protein.
Length = 1756
Score = 29.9 bits (64), Expect = 7.6
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +1
Query: 394 AKAEEENTEKRSQNLDEAKKILLQEDPSLPKATVVKICETTEHRGQRICIRGWVHRLRR 570
A E+E E R + + +K++LQ+DP + + + E + +R + G + LRR
Sbjct: 1428 AALEQEEAEAR-EKVTHTQKVVLQQDPQQAREHALLRLQLEEEQHRRQLLEGELETLRR 1485
>AJ224874-1|CAA12175.1| 1966|Homo sapiens L-type calcium channel
alpha-1 subunit protein.
Length = 1966
Score = 29.9 bits (64), Expect = 7.6
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = -2
Query: 303 IF*VNINCGKWLFASMMHCFQYCLEWFLFRTITCIVIAILIRGIYLGQAKVSNVRHVERL 124
IF V I +F + +H +C WF + + ++++ GI+ V + V R+
Sbjct: 903 IFTVEILLKMTVFGAFLHRGSFCRSWFNMLDLLVVSVSLISFGIHSSAISVVKILRVLRV 962
Query: 123 L 121
L
Sbjct: 963 L 963
>AJ006216-1|CAA06916.1| 1966|Homo sapiens L-type calcium channel
alpha-1 subunit protein.
Length = 1966
Score = 29.9 bits (64), Expect = 7.6
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = -2
Query: 303 IF*VNINCGKWLFASMMHCFQYCLEWFLFRTITCIVIAILIRGIYLGQAKVSNVRHVERL 124
IF V I +F + +H +C WF + + ++++ GI+ V + V R+
Sbjct: 903 IFTVEILLKMTVFGAFLHRGSFCRSWFNMLDLLVVSVSLISFGIHSSAISVVKILRVLRV 962
Query: 123 L 121
L
Sbjct: 963 L 963
>AF201304-1|AAF15290.1| 1977|Homo sapiens voltage-gated L-type calcium
channel alpha-1 subunit protein.
Length = 1977
Score = 29.9 bits (64), Expect = 7.6
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = -2
Query: 303 IF*VNINCGKWLFASMMHCFQYCLEWFLFRTITCIVIAILIRGIYLGQAKVSNVRHVERL 124
IF V I +F + +H +C WF + + ++++ GI+ V + V R+
Sbjct: 914 IFTVEILLKMTVFGAFLHRGSFCRSWFNMLDLLVVSVSLISFGIHSSAISVVKILRVLRV 973
Query: 123 L 121
L
Sbjct: 974 L 974
>AF067227-1|AAD03587.1| 1912|Homo sapiens voltage-gated L-type calcium
channel alpha-1 subunit protein.
Length = 1912
Score = 29.9 bits (64), Expect = 7.6
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = -2
Query: 303 IF*VNINCGKWLFASMMHCFQYCLEWFLFRTITCIVIAILIRGIYLGQAKVSNVRHVERL 124
IF V I +F + +H +C WF + + ++++ GI+ V + V R+
Sbjct: 849 IFTVEILLKMTVFGAFLHRGSFCRSWFNMLDLLVVSVSLISFGIHSSAISVVKILRVLRV 908
Query: 123 L 121
L
Sbjct: 909 L 909
>AF041004-1|AAD17459.1| 1756|Homo sapiens periplakin protein.
Length = 1756
Score = 29.9 bits (64), Expect = 7.6
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +1
Query: 394 AKAEEENTEKRSQNLDEAKKILLQEDPSLPKATVVKICETTEHRGQRICIRGWVHRLRR 570
A E+E E R + + +K++LQ+DP + + + E + +R + G + LRR
Sbjct: 1428 AALEQEEAEAR-EKVTHTQKVVLQQDPQQAREHALLRLQLEEEQHRRQLLEGELETLRR 1485
>AF013717-1|AAC39668.1| 1756|Homo sapiens periplakin protein.
Length = 1756
Score = 29.9 bits (64), Expect = 7.6
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +1
Query: 394 AKAEEENTEKRSQNLDEAKKILLQEDPSLPKATVVKICETTEHRGQRICIRGWVHRLRR 570
A E+E E R + + +K++LQ+DP + + + E + +R + G + LRR
Sbjct: 1428 AALEQEEAEAR-EKVTHTQKVVLQQDPQQAREHALLRLQLEEEQHRRQLLEGELETLRR 1485
>AF001691-1|AAC17738.1| 1756|Homo sapiens 195 kDa cornified envelope
precursor protein.
Length = 1756
Score = 29.9 bits (64), Expect = 7.6
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +1
Query: 394 AKAEEENTEKRSQNLDEAKKILLQEDPSLPKATVVKICETTEHRGQRICIRGWVHRLRR 570
A E+E E R + + +K++LQ+DP + + + E + +R + G + LRR
Sbjct: 1428 AALEQEEAEAR-EKVTHTQKVVLQQDPQQAREHALLRLQLEEEQHRRQLLEGELETLRR 1485
>AB011140-1|BAA25494.1| 1426|Homo sapiens KIAA0568 protein protein.
Length = 1426
Score = 29.9 bits (64), Expect = 7.6
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +1
Query: 394 AKAEEENTEKRSQNLDEAKKILLQEDPSLPKATVVKICETTEHRGQRICIRGWVHRLRR 570
A E+E E R + + +K++LQ+DP + + + E + +R + G + LRR
Sbjct: 1098 AALEQEEAEAR-EKVTHTQKVVLQQDPQQAREHALLRLQLEEEQHRRQLLEGELETLRR 1155
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,935,957
Number of Sequences: 237096
Number of extensions: 1593064
Number of successful extensions: 4054
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 3851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4054
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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