Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11l21r
(746 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC107478-1|AAI07479.1| 416|Homo sapiens C6orf205 protein protein. 31 4.4
BC105737-1|AAI05738.1| 566|Homo sapiens chromosome 6 open readi... 31 4.4
BC105735-1|AAI05736.1| 566|Homo sapiens chromosome 6 open readi... 31 4.4
AL669830-8|CAI18008.1| 566|Homo sapiens chromosome 6 open readi... 31 4.4
AL663093-1|CAI17705.1| 566|Homo sapiens chromosome 6 open readi... 31 4.4
AB158503-1|BAD69710.1| 151|Homo sapiens splice variant of four ... 31 5.8
>BC107478-1|AAI07479.1| 416|Homo sapiens C6orf205 protein protein.
Length = 416
Score = 31.1 bits (67), Expect = 4.4
Identities = 37/134 (27%), Positives = 57/134 (42%)
Frame = -3
Query: 597 TN*YETTR*TAWSTPINFGSRAPRTSSGIVSQLSSDLSSPKTRLSLCTSATVSL*R*AMM 418
TN +T + ST N GS TSSG + +S+ S+ + S T++ S +
Sbjct: 196 TNSESSTTSSGASTATNSGSST--TSSGTSTATNSESSTVSSGASTATTSESSTTS-SGA 252
Query: 417 FKATMADLPTATARTRQARESAGS*SLCGXXXXXXXXXXTLNVTNTWYWESALTGTATIW 238
AT ++ T ++ A S S + G +VT+ +ALTG T
Sbjct: 253 STATNSESSTVSSGASTATNSESSTTSSGANTATNSGS---SVTSAGSGTAALTGMHTTS 309
Query: 237 PSESTASIVSEPSG 196
S STA ++P G
Sbjct: 310 HSASTAVSEAKPGG 323
>BC105737-1|AAI05738.1| 566|Homo sapiens chromosome 6 open reading
frame 205 protein.
Length = 566
Score = 31.1 bits (67), Expect = 4.4
Identities = 37/134 (27%), Positives = 57/134 (42%)
Frame = -3
Query: 597 TN*YETTR*TAWSTPINFGSRAPRTSSGIVSQLSSDLSSPKTRLSLCTSATVSL*R*AMM 418
TN +T + ST N GS TSSG + +S+ S+ + S T++ S +
Sbjct: 346 TNSESSTTSSGASTATNSGSST--TSSGTSTATNSESSTVSSGASTATTSESSTTS-SGA 402
Query: 417 FKATMADLPTATARTRQARESAGS*SLCGXXXXXXXXXXTLNVTNTWYWESALTGTATIW 238
AT ++ T ++ A S S + G +VT+ +ALTG T
Sbjct: 403 STATNSESSTVSSGASTATNSESSTTSSGANTATNSGS---SVTSAGSGTAALTGMHTTS 459
Query: 237 PSESTASIVSEPSG 196
S STA ++P G
Sbjct: 460 HSASTAVSEAKPGG 473
>BC105735-1|AAI05736.1| 566|Homo sapiens chromosome 6 open reading
frame 205 protein.
Length = 566
Score = 31.1 bits (67), Expect = 4.4
Identities = 37/134 (27%), Positives = 57/134 (42%)
Frame = -3
Query: 597 TN*YETTR*TAWSTPINFGSRAPRTSSGIVSQLSSDLSSPKTRLSLCTSATVSL*R*AMM 418
TN +T + ST N GS TSSG + +S+ S+ + S T++ S +
Sbjct: 346 TNSESSTTSSGASTATNSGSST--TSSGTSTATNSESSTVSSGASTATTSESSTTS-SGA 402
Query: 417 FKATMADLPTATARTRQARESAGS*SLCGXXXXXXXXXXTLNVTNTWYWESALTGTATIW 238
AT ++ T ++ A S S + G +VT+ +ALTG T
Sbjct: 403 STATNSESSTVSSGASTATNSESSTTSSGANTATNSGS---SVTSAGSGTAALTGMHTTS 459
Query: 237 PSESTASIVSEPSG 196
S STA ++P G
Sbjct: 460 HSASTAVSEAKPGG 473
>AL669830-8|CAI18008.1| 566|Homo sapiens chromosome 6 open reading
frame 205 protein.
Length = 566
Score = 31.1 bits (67), Expect = 4.4
Identities = 37/134 (27%), Positives = 57/134 (42%)
Frame = -3
Query: 597 TN*YETTR*TAWSTPINFGSRAPRTSSGIVSQLSSDLSSPKTRLSLCTSATVSL*R*AMM 418
TN +T + ST N GS TSSG + +S+ S+ + S T++ S +
Sbjct: 346 TNSESSTTSSGASTATNSGSST--TSSGTSTATNSESSTVSSGASTATTSESSTTS-SGA 402
Query: 417 FKATMADLPTATARTRQARESAGS*SLCGXXXXXXXXXXTLNVTNTWYWESALTGTATIW 238
AT ++ T ++ A S S + G +VT+ +ALTG T
Sbjct: 403 STATNSESSTVSSGASTATNSESSTTSSGANTATNSGS---SVTSAGSGTAALTGMHTTS 459
Query: 237 PSESTASIVSEPSG 196
S STA ++P G
Sbjct: 460 HSASTAVSEAKPGG 473
>AL663093-1|CAI17705.1| 566|Homo sapiens chromosome 6 open reading
frame 205 protein.
Length = 566
Score = 31.1 bits (67), Expect = 4.4
Identities = 37/134 (27%), Positives = 57/134 (42%)
Frame = -3
Query: 597 TN*YETTR*TAWSTPINFGSRAPRTSSGIVSQLSSDLSSPKTRLSLCTSATVSL*R*AMM 418
TN +T + ST N GS TSSG + +S+ S+ + S T++ S +
Sbjct: 346 TNSESSTTSSGASTATNSGSST--TSSGTSTATNSESSTVSSGASTATTSESSTTS-SGA 402
Query: 417 FKATMADLPTATARTRQARESAGS*SLCGXXXXXXXXXXTLNVTNTWYWESALTGTATIW 238
AT ++ T ++ A S S + G +VT+ +ALTG T
Sbjct: 403 STATNSESSTVSSGASTATNSESSTTSSGANTATNSGS---SVTSAGSGTAALTGMHTTS 459
Query: 237 PSESTASIVSEPSG 196
S STA ++P G
Sbjct: 460 HSASTAVSEAKPGG 473
>AB158503-1|BAD69710.1| 151|Homo sapiens splice variant of four and
a half LIM domain protein 2 protein.
Length = 151
Score = 30.7 bits (66), Expect = 5.8
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -3
Query: 564 WSTPINFGSRAPRTSSGIVSQLSSDLSSPKT-RLSLC 457
WST G R +++ SQL +SSPKT R+S+C
Sbjct: 57 WSTRAAAGMRPASSATAASSQLEPRVSSPKTIRISVC 93
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,680,074
Number of Sequences: 237096
Number of extensions: 1896821
Number of successful extensions: 4952
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4952
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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