Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11l20r
(695 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0254 + 16236689-16236793,16237760-16237808,16237988-162380... 112 3e-25
03_05_0235 - 22214700-22214914,22218782-22219045,22219258-22219294 40 0.001
03_02_0555 + 9431451-9431688,9432685-9432803,9432886-9433079,943... 37 0.018
02_01_0174 - 1193696-1193726,1193822-1194175,1194307-1194542,119... 34 0.094
03_05_0067 - 20460206-20460703,20461255-20461530 34 0.12
02_04_0661 - 24802868-24802921,24803004-24803089,24803178-248032... 33 0.16
10_08_0747 - 20272157-20272456,20272538-20272664,20272770-202728... 32 0.38
08_02_1559 - 27873345-27873407,27873549-27873830,27874162-278742... 32 0.38
04_04_0979 - 29862280-29862444,29862718-29862999,29863831-298639... 32 0.38
03_06_0402 + 33681451-33681706,33682800-33682936,33683103-336831... 32 0.38
05_03_0025 + 7462272-7462412,7462865-7463032 32 0.50
12_02_1219 + 27096477-27096590,27096704-27097078 31 0.87
05_01_0290 + 2270749-2271037,2272227-2272363,2272660-2272805,227... 31 0.87
05_03_0023 + 7457836-7457976,7458313-7458480 31 1.2
03_05_0702 - 26934736-26935551,26937494-26937538,26938484-26938594 31 1.2
02_05_0627 + 30463452-30463774,30463841-30463956,30464125-304643... 30 1.5
09_06_0308 - 22199389-22199451,22199604-22199924,22200178-222004... 30 2.0
04_04_0152 - 23137101-23137112,23138084-23138488 30 2.0
11_02_0073 - 8020401-8020512,8020594-8020679,8020761-8020921,802... 29 2.7
07_01_0628 - 4691991-4692806,4694291-4694293,4694527-4694637 29 2.7
01_06_1775 - 39808794-39808919,39809021-39809127,39810594-39812178 29 2.7
07_01_0413 - 3155080-3155274,3155628-3155933,3156062-3156163,315... 29 3.5
04_04_0435 - 25170348-25170593,25170989-25171189,25171580-251717... 29 4.7
12_02_0450 + 19172812-19172920,19173020-19173088,19173168-191732... 28 6.2
05_07_0269 - 28837918-28838075,28840443-28840551,28840774-28841910 28 6.2
03_05_0630 + 26260159-26260272,26260520-26260894 28 6.2
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 28 8.1
>10_08_0254 +
16236689-16236793,16237760-16237808,16237988-16238076,
16238178-16238234,16238684-16238746,16238828-16238893,
16239520-16239606,16239691-16239784,16240351-16240673,
16241022-16241048,16241065-16241145,16241445-16241476,
16242126-16242266,16242455-16242516,16243170-16243387
Length = 497
Score = 112 bits (269), Expect = 3e-25
Identities = 49/76 (64%), Positives = 60/76 (78%)
Frame = -3
Query: 651 KSFAFINFASFEASDAAIEAMNNQYXCNRPISVSYAFKKDVKGERHGSAAERLLXAQNPL 472
+ F F+++ SFE+SD AIEAMNNQ+ CNRPI+VSYA+KKD KGERHG+ AERLL A NP
Sbjct: 154 RGFGFVSYDSFESSDQAIEAMNNQHLCNRPITVSYAYKKDTKGERHGTPAERLLAANNPG 213
Query: 471 SHADRPHQLFADAPXT 424
S +RPH +FA P T
Sbjct: 214 SQKNRPHTMFASGPPT 229
>03_05_0235 - 22214700-22214914,22218782-22219045,22219258-22219294
Length = 171
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/54 (35%), Positives = 32/54 (59%)
Frame = -3
Query: 660 RKFKSFAFINFASFEASDAAIEAMNNQYXCNRPISVSYAFKKDVKGERHGSAAE 499
+K +SF F+ F E + AA++ M+ R ++V+YAF + +KG G AA+
Sbjct: 46 QKHRSFGFVTFLEREDAAAAMDNMDGAELFGRVLTVNYAFPERIKGGEQGWAAQ 99
>03_02_0555 +
9431451-9431688,9432685-9432803,9432886-9433079,
9433174-9433430,9433544-9433650,9433715-9433888,
9434359-9434490,9434776-9434955,9435062-9435265
Length = 534
Score = 36.7 bits (81), Expect = 0.018
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = -3
Query: 651 KSFAFINFASFEASDAAIEAMNNQYXCNRPISVSYAFKK 535
+ + F+ FA E++DA+I+ +NN + C R + V+ KK
Sbjct: 154 RGYGFVQFALQESADASIQNLNNSHFCGRQLHVATFIKK 192
>02_01_0174 -
1193696-1193726,1193822-1194175,1194307-1194542,
1194629-1194741,1195963-1196161,1196427-1196513
Length = 339
Score = 34.3 bits (75), Expect = 0.094
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = -3
Query: 651 KSFAFINFASFEASDAAIEAMNNQYXCNRPISVSYAFKKDVKGERHGSAAER 496
++FAF+ + E + A+E N +R ISV YA + D + +R+G + ER
Sbjct: 189 RNFAFVQYELQEDATKALEGTNGSTLMDRVISVEYALRDDDE-KRNGYSPER 239
>03_05_0067 - 20460206-20460703,20461255-20461530
Length = 257
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = -3
Query: 675 ERS*NRKFKSFAFINFASFEASDAAIEAMNNQYXCNRPISVSYAF-KKDVKGERHGS 508
+RS R K + F+ F + A+ MN QY +RP+ + A KK++ G++ S
Sbjct: 195 DRSTGRS-KGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKNIGGQQQPS 250
>02_04_0661 -
24802868-24802921,24803004-24803089,24803178-24803274,
24803378-24803475,24804705-24804882,24805485-24805676
Length = 234
Score = 33.5 bits (73), Expect = 0.16
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = -3
Query: 657 KFKSFAFINFASFEASDAAIEAMNNQYXCNRPISV 553
K + +AF++FA+ AA++ MN +Y NRPI +
Sbjct: 165 KTRGYAFVSFANASDLAAALKEMNGKYVGNRPIKL 199
>10_08_0747 - 20272157-20272456,20272538-20272664,20272770-20272843,
20272928-20272971,20273697-20276223
Length = 1023
Score = 32.3 bits (70), Expect = 0.38
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -3
Query: 651 KSFAFINFASFEASDAAIEAMNNQYXCNRPISVSYAFKK 535
+ +AF+ + + E + A E MN + C RP+ V A +K
Sbjct: 913 RGYAFVQYTTKEEAQLAKEKMNGRLVCGRPVVVHLASEK 951
>08_02_1559 -
27873345-27873407,27873549-27873830,27874162-27874263,
27874402-27874872
Length = 305
Score = 32.3 bits (70), Expect = 0.38
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -3
Query: 651 KSFAFINFASFEASDAAIEAMNNQYXCNRPISVSYAFKKDVKG 523
+ F F++ AS E D AI A++ Q RP+ V+ A ++ +G
Sbjct: 262 RGFGFVSMASKEELDDAISALDGQELDGRPLRVNVAAERPQRG 304
>04_04_0979 -
29862280-29862444,29862718-29862999,29863831-29863929,
29864037-29864366
Length = 291
Score = 32.3 bits (70), Expect = 0.38
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -3
Query: 657 KFKSFAFINFASFEASDAAIEAMNNQYXCNRPISVSY--AFKKDVKGERHGSAAER 496
K K FAF+ A+ E + AA+E +N+ R I V + +F+K G+ ER
Sbjct: 118 KKKGFAFVTMATAEEAAAAVEKLNSLDVMGRTIRVEFSKSFRKPAPPPPPGTILER 173
>03_06_0402 +
33681451-33681706,33682800-33682936,33683103-33683153,
33683798-33683866,33684286-33684428,33685464-33685521,
33685823-33685938,33686298-33686391,33686950-33686961
Length = 311
Score = 32.3 bits (70), Expect = 0.38
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -3
Query: 645 FAFINFASFEASDAAIEAMNNQYXCNRPISVSYAFKK 535
+A + + SFE + AI+AMN R + V +AF +
Sbjct: 173 YALVEYESFEEAQTAIKAMNGTQLLTRTVYVDWAFSR 209
>05_03_0025 + 7462272-7462412,7462865-7463032
Length = 102
Score = 31.9 bits (69), Expect = 0.50
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -3
Query: 651 KSFAFINFASFEASDAAIEAMNNQYXCNRPISVSYA 544
+ F F+NF E+ +AAI+ MN Q R ++V+ A
Sbjct: 58 RGFGFVNFEDSESVNAAIQGMNGQDIGGRNVTVAQA 93
>12_02_1219 + 27096477-27096590,27096704-27097078
Length = 162
Score = 31.1 bits (67), Expect = 0.87
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = -3
Query: 678 NERS*NRKFKSFAFINFASFEASDAAIEAMNNQYXCNRPISVSYAFKKDVKGERHGSAAE 499
N+R R + F F+ F+S +A AIE MN + R I+V+ A + G G +
Sbjct: 41 NDRETGRS-RGFGFVTFSSEQAMRDAIEGMNGKELDGRNITVNEAQSRRSGGGGGGGYGQ 99
Query: 498 R 496
R
Sbjct: 100 R 100
>05_01_0290 +
2270749-2271037,2272227-2272363,2272660-2272805,
2272853-2272877
Length = 198
Score = 31.1 bits (67), Expect = 0.87
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -3
Query: 651 KSFAFINFASFEASDAAIEAMNNQYXCNRPISVSYAF 541
K +A I + +FE + AAI+A++ + ISV +AF
Sbjct: 142 KGYALIEYETFEEAQAAIKALDGTELLTQIISVDWAF 178
>05_03_0023 + 7457836-7457976,7458313-7458480
Length = 102
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -3
Query: 651 KSFAFINFASFEASDAAIEAMNNQYXCNRPISVSYA 544
+ F F+NF E+ +AAI MN Q R ++V+ A
Sbjct: 58 RGFGFVNFEDNESVNAAIHGMNGQDIGGRKVTVARA 93
>03_05_0702 - 26934736-26935551,26937494-26937538,26938484-26938594
Length = 323
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = -3
Query: 660 RKFKSFAFINFASFEASDAAIEAMNNQYXCNRPISVSYAFKK 535
++ + F F+ F+ EA D+AI+ M+ Q R ISV+ A K
Sbjct: 60 QRHRGFGFVTFSDPEAVDSAIKEMHCQELDGRTISVNKAEPK 101
>02_05_0627 +
30463452-30463774,30463841-30463956,30464125-30464371,
30464458-30464555,30465216-30465284,30465752-30465820,
30465913-30466028
Length = 345
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -3
Query: 663 NRKFKSFAFINFASFEASDAAIEAMNNQ 580
+++ K +AFI + + EA AA++AMN Q
Sbjct: 316 SKRSKGYAFIEYTTEEAGGAALKAMNGQ 343
>09_06_0308 -
22199389-22199451,22199604-22199924,22200178-22200423,
22202152-22203337,22203487-22203551,22204205-22204486,
22205005-22205106,22205587-22206105
Length = 927
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 651 KSFAFINFASFEASDAAIEAMNNQYXCNRPISVSYA 544
+ F F++ A+ D I ++N Q RP+ VS+A
Sbjct: 884 RGFGFVSMATLREPDDVIASLNGQIMDGRPMRVSFA 919
>04_04_0152 - 23137101-23137112,23138084-23138488
Length = 138
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = -2
Query: 532 CERGEARISSREITXCTKSTIACGQTSPVVCRCTTYVDGACANGTTAAAHTIPDAT 365
C G+ R + + TKS G + V CT V+G C G A A + D T
Sbjct: 13 CAAGDVRSALAMLARGTKS----GDAALDVTACTALVNGCCKGGDVAEARRVFDET 64
>11_02_0073 -
8020401-8020512,8020594-8020679,8020761-8020921,
8021196-8021400,8021664-8021697,8022352-8022422,
8023363-8023542,8023625-8023765,8023859-8023975,
8024074-8024469
Length = 500
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -3
Query: 651 KSFAFINFASFEASDAAIEAMNNQYXCNRPISVSYAFKK 535
K FAF+NF + EA+ AIE ++++ R + S + K
Sbjct: 145 KGFAFVNFTAKEAAQRAIEELHDKEHKGRTLRCSLSQAK 183
>07_01_0628 - 4691991-4692806,4694291-4694293,4694527-4694637
Length = 309
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -3
Query: 651 KSFAFINFASFEASDAAIEAMNNQYXCNRPISVSYA 544
+ F F+ F+ A DAAI M+N R ISV+ A
Sbjct: 49 RGFGFVTFSEPRAVDAAIRGMHNGELDGRTISVNKA 84
>01_06_1775 - 39808794-39808919,39809021-39809127,39810594-39812178
Length = 605
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/43 (30%), Positives = 26/43 (60%)
Frame = -3
Query: 651 KSFAFINFASFEASDAAIEAMNNQYXCNRPISVSYAFKKDVKG 523
+ F F++F++ + A +AM+ + RP+ +S+A K V+G
Sbjct: 541 RGFGFVHFSNEYEAKCAKDAMDGKVMLGRPLRISFALDK-VRG 582
>07_01_0413 -
3155080-3155274,3155628-3155933,3156062-3156163,
3156262-3156705
Length = 348
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -3
Query: 651 KSFAFINFASFEASDAAIEAMNNQYXCNRPISVSYAFKKDVKG 523
+ F F++F + E + AA+EA++ RP+ +S A + G
Sbjct: 261 RGFGFVSFRTAEDAQAALEALDGVELEGRPLRLSMAEQNPTAG 303
>04_04_0435 -
25170348-25170593,25170989-25171189,25171580-25171756,
25172284-25172418,25173131-25173262,25173292-25173369,
25173452-25174108,25174210-25174328,25175897-25176173
Length = 673
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = -3
Query: 663 NRKFKSFAFINFASFEASDAAIEAMNNQYXCNRPISVSYAFKKDVKGERHGSA 505
+R+ +A++NF + + A+E +N +PI V Y+ +D R GSA
Sbjct: 76 SRRSLGYAYVNFNNPVDAARALELLNFAPLNGKPIRVMYS-NRDPSSRRSGSA 127
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = -3
Query: 651 KSFAFINFASFEASDAAIEAMNNQYXCNRPISVSYAFKK 535
K F F+ + EA+ +AI+++N ++P+ V +K
Sbjct: 167 KGFGFVQYDKGEAAQSAIKSLNGMLINDKPVYVGPFLRK 205
>12_02_0450 +
19172812-19172920,19173020-19173088,19173168-19173274,
19173874-19174365
Length = 258
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -3
Query: 678 NERS*NRKFKSFAFINFASFEASDAAIEAMNNQYXCNRPISVSYA 544
N+R R + F FI +AS E + AAI A++ + R I V+ A
Sbjct: 64 NDRETGRS-RGFGFITYASSEEASAAITALDGKDLDGRNIRVNTA 107
>05_07_0269 - 28837918-28838075,28840443-28840551,28840774-28841910
Length = 467
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = -2
Query: 532 CERGEARISSREITXCTKSTIACGQTSPVVCRCTTYVDGACANGTTAAAHTIPD 371
C G+ R + + TKS G + V CT V+G C G A A + D
Sbjct: 13 CAAGDVRSALAMLARGTKS----GDAALDVTACTALVNGCCKGGDVAEARRVFD 62
>03_05_0630 + 26260159-26260272,26260520-26260894
Length = 162
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -3
Query: 678 NERS*NRKFKSFAFINFASFEASDAAIEAMNNQYXCNRPISVSYA 544
N+R R + F F+ F+S ++ AIE MN + R I+V+ A
Sbjct: 41 NDRETGRS-RGFGFVTFSSEQSMRDAIEGMNGKELDGRNITVNEA 84
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -3
Query: 651 KSFAFINFASFEASDAAIEAMNNQYXCNRPISVSYAFK 538
K + F+ ++ ++AAI AMN + R I+V A K
Sbjct: 348 KGYGFVKYSDVSQANAAIAAMNGYHLEGRVIAVRVAGK 385
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,092,850
Number of Sequences: 37544
Number of extensions: 135139
Number of successful extensions: 468
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 467
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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