Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11l20f
(576 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 349 1e-96
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 82 4e-16
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 69 2e-12
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 69 2e-12
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 8e-12
SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28) 66 1e-11
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 57 1e-08
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 57 1e-08
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 5e-08
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 1e-07
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 53 1e-07
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 53 1e-07
SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21) 52 3e-07
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 52 4e-07
SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25) 51 6e-07
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 6e-07
SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 4e-06
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 48 5e-06
SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 5e-06
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 7e-06
SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23) 47 1e-05
SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18) 46 3e-05
SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 7e-05
SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18) 44 9e-05
SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0) 43 2e-04
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 43 2e-04
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 6e-04
SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07) 39 0.003
SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 39 0.003
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_43406| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.004
SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15) 38 0.004
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 38 0.004
SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13) 37 0.010
SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.014
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 37 0.014
SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.018
SB_34470| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.024
SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19) 36 0.031
SB_52029| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 36 0.031
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.031
SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013) 35 0.041
SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11) 35 0.041
SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23) 35 0.055
SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.055
SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.072
SB_9365| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.29
SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28) 31 0.51
SB_16080| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.51
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.67
SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.67
SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.89
SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.89
SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_53239| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_21838| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35) 30 1.6
SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15) 30 1.6
SB_34062| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) 30 1.6
SB_40007| Best HMM Match : Arm (HMM E-Value=0.84) 29 2.1
SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35) 29 2.7
SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33) 29 3.6
SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11) 28 4.8
SB_44482| Best HMM Match : RRM_1 (HMM E-Value=0.19) 28 6.3
SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_58665| Best HMM Match : TSP_1 (HMM E-Value=7.5e-10) 28 6.3
SB_48256| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_58796| Best HMM Match : TIG (HMM E-Value=6.3e-22) 27 8.3
SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
SB_7522| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 349 bits (857), Expect = 1e-96
Identities = 159/181 (87%), Positives = 175/181 (96%)
Frame = +2
Query: 29 MAAGPIAERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVE 208
MAAGPIAERNQDATIYVGGLD++V+E+L+WELF+QSGPVVNVHMPKDR+TQ HQGYGFVE
Sbjct: 1 MAAGPIAERNQDATIYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVE 60
Query: 209 FMGEEDADYAIKVMNMIKLYGKPVRVNKASAHQKNLDVGANVFIGNLDPEVDEKLLYDTF 388
F+GEEDADYAIKVMNMIK+YGKP+RVNKASAH KNLDVGAN+FIGNLD EVDEKLLYDTF
Sbjct: 61 FLGEEDADYAIKVMNMIKVYGKPIRVNKASAHNKNLDVGANLFIGNLDTEVDEKLLYDTF 120
Query: 389 SAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYLCNRPISVSYAFKK 568
SAFGVILQTPK+MRD +TGNSK FAFINFASF+ASDAAIEAMN QYLCNRPI+VSYAFKK
Sbjct: 121 SAFGVILQTPKIMRDSDTGNSKGFAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKK 180
Query: 569 D 571
+
Sbjct: 181 E 181
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 81.8 bits (193), Expect = 4e-16
Identities = 57/200 (28%), Positives = 104/200 (52%), Gaps = 17/200 (8%)
Frame = +2
Query: 23 EKMAAGPIAERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGF 202
EKM P N +YV D + + + E+ ++G +V++ + D ++ +G+GF
Sbjct: 99 EKMGTQPKKFTN----VYVKNFGDDMDDEQMKEICAEAGKIVSLKVMTDPEGKS-KGFGF 153
Query: 203 VEFMGEEDADYAIKVMNMIKLYGKPV-----------------RVNKASAHQKNLDVGAN 331
V F E+A+ A+ V+N ++ G+ + + K + N G N
Sbjct: 154 VSFETPEEAEEAVNVLNGKEIGGRRLWAGRAKKRAERAAEVKAEIEKKRQERINRFQGVN 213
Query: 332 VFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEA 511
++I NLD +D++ L + FS +G I + KVM+D + GNSK F F+ F+S E + A+
Sbjct: 214 LYIKNLDDPIDDERLREEFSPYGTI-SSAKVMKD-DKGNSKGFGFVCFSSPEEATKAVTE 271
Query: 512 MNNQYLCNRPISVSYAFKKD 571
MN + L ++P+ V+ A +++
Sbjct: 272 MNGRILISKPLYVALAQRRE 291
Score = 79.0 bits (186), Expect = 3e-15
Identities = 53/177 (29%), Positives = 98/177 (55%), Gaps = 9/177 (5%)
Frame = +2
Query: 65 ATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFM--GEEDADYA 238
A++YVG L VTE++L+E F +G V+++ + +D VT+ GY +V F G + A A
Sbjct: 13 ASLYVGDLAPDVTEAMLYEKFSTAGSVLSIRVCRDLVTRRSLGYAYVNFQQPGHDAALEA 72
Query: 239 IKVMNMIKLYGKPVRVNKASAHQKNLD-VG------ANVFIGNLDPEVDEKLLYDTFSAF 397
I ++ + L K V V + + ++ ++ +G NV++ N ++D++ + + +
Sbjct: 73 IARVDGMLLNDKKVFVGRWMSKKERIEKMGTQPKKFTNVYVKNFGDDMDDEQMKEICAEA 132
Query: 398 GVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYLCNRPISVSYAFKK 568
G I+ KVM DPE G SK F F++F + E ++ A+ +N + + R + A K+
Sbjct: 133 GKIVSL-KVMTDPE-GKSKGFGFVSFETPEEAEEAVNVLNGKEIGGRRLWAGRAKKR 187
Score = 42.7 bits (96), Expect = 2e-04
Identities = 27/86 (31%), Positives = 42/86 (48%)
Frame = +2
Query: 53 RNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDAD 232
R Q +Y+ LDD + + L E F G + + + KD + +G+GFV F E+A
Sbjct: 208 RFQGVNLYIKNLDDPIDDERLREEFSPYGTISSAKVMKDDKGNS-KGFGFVCFSSPEEAT 266
Query: 233 YAIKVMNMIKLYGKPVRVNKASAHQK 310
A+ MN L KP+ V A ++
Sbjct: 267 KAVTEMNGRILISKPLYVALAQRREE 292
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 69.3 bits (162), Expect = 2e-12
Identities = 33/74 (44%), Positives = 45/74 (60%)
Frame = +2
Query: 74 YVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVMN 253
YVGGL + V E +L F+ G + +V +P D T H+G+GFVEF ED AI MN
Sbjct: 8 YVGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFEFAEDTAAAIDNMN 67
Query: 254 MIKLYGKPVRVNKA 295
+L+G+ +RVN A
Sbjct: 68 ESELFGRTIRVNLA 81
Score = 49.2 bits (112), Expect = 2e-06
Identities = 28/75 (37%), Positives = 39/75 (52%)
Frame = +2
Query: 335 FIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAM 514
++G L EVDEK+L+ F FG I ++ D T + F F+ F E + AAI+ M
Sbjct: 8 YVGGLAEEVDEKVLHAAFIPFGDITDV-QIPMDYTTSKHRGFGFVEFEFAEDTAAAIDNM 66
Query: 515 NNQYLCNRPISVSYA 559
N L R I V+ A
Sbjct: 67 NESELFGRTIRVNLA 81
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 69.3 bits (162), Expect = 2e-12
Identities = 40/159 (25%), Positives = 81/159 (50%), Gaps = 10/159 (6%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
+YVG ++ + E + F GP+ + + D + H+G+ FVE+ E A A++ M
Sbjct: 104 VYVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYDLPEAAQLALEQM 163
Query: 251 NMIKLYGKPVRVNKAS----------AHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFG 400
N + L G+ ++V + S ++ A ++I ++ P++ E + F AFG
Sbjct: 164 NGVLLGGRNIKVGRPSNVPQAAPLIEQFEQEAKKYARIYIASVHPDLLEDDIKSVFEAFG 223
Query: 401 VILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMN 517
++ + ++P TG K + FI + + ++++ AI +MN
Sbjct: 224 KVVHC-SLSKEPMTGKHKGYGFIEYENQQSANDAIASMN 261
Score = 54.4 bits (125), Expect = 6e-08
Identities = 27/82 (32%), Positives = 47/82 (57%)
Frame = +2
Query: 50 ERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDA 229
E + A IY+ + + E + +F G VV+ + K+ +T H+GYGF+E+ ++ A
Sbjct: 194 EAKKYARIYIASVHPDLLEDDIKSVFEAFGKVVHCSLSKEPMTGKHKGYGFIEYENQQSA 253
Query: 230 DYAIKVMNMIKLYGKPVRVNKA 295
+ AI MN+ L G+ +RV +A
Sbjct: 254 NDAIASMNLFDLGGQFLRVGRA 275
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 67.3 bits (157), Expect = 8e-12
Identities = 48/184 (26%), Positives = 88/184 (47%)
Frame = +2
Query: 11 VKSFEKMAAGPIAERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQ 190
+ + E M G ER YV +++ + ++F G V + + +DR T
Sbjct: 12 INNHEPMENGTSDERTNLIINYV---PPSMSQEDIKKIFGTVGNVTSCKLIRDRATGQSL 68
Query: 191 GYGFVEFMGEEDADYAIKVMNMIKLYGKPVRVNKASAHQKNLDVGANVFIGNLDPEVDEK 370
GY FV + +DA+ A++ MN +L K ++V+ A + AN++I L ++ E+
Sbjct: 69 GYAFVNYDNPDDANKAVREMNGARLQNKTLKVSFARPSSTEIK-NANLYISGLPKDMKEE 127
Query: 371 LLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYLCNRPISV 550
+ F FG I+ T KV++D +G + F+ F + AI+ +NN+ L + +
Sbjct: 128 EVEALFKPFGKII-TSKVLKD-VSGEGRGTGFVRFDKRCEAQTAIDDLNNKTLPGTNVKL 185
Query: 551 SYAF 562
+ F
Sbjct: 186 TVKF 189
Score = 39.9 bits (89), Expect = 0.001
Identities = 26/82 (31%), Positives = 37/82 (45%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
I+V GL T L++LF G + N+ + D+ GYGFV E+A +AI +
Sbjct: 274 IFVYGLPQEATPLFLYKLFSPYGAITNIELKLDK------GYGFVNMSNYEEACHAICCL 327
Query: 251 NMIKLYGKPVRVNKASAHQKNL 316
N +GK R NL
Sbjct: 328 NGTPQHGKYSRFPSKHLKTTNL 349
>SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28)
Length = 419
Score = 66.5 bits (155), Expect = 1e-11
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 2/172 (1%)
Frame = +2
Query: 50 ERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDA 229
E+ +Y+ GL T+ L L + G +++ D+ T +GYGFV+F A
Sbjct: 95 EKLSKTNLYIRGLKANTTDDDLVRLCHKYGTIISTKAILDKDTNLCKGYGFVDFESPISA 154
Query: 230 DYAIKVMNMIKLYGKPVRVNKASAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVIL 409
A+ L K ++ A +++ N++I NL DE +L + FS +G ++
Sbjct: 155 QKAVAA-----LVNKGIQAQMAKQQEQD---PTNLYIQNLPQNCDEAMLENMFSKYGKVI 206
Query: 410 QTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYL--CNRPISVSYA 559
T +++RD +T NSK F S E + I+ N + L C + + V +A
Sbjct: 207 ST-RILRDKDT-NSKGVGFARMESAEKCEQVIKDFNKKMLPGCIQELVVKFA 256
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 56.8 bits (131), Expect = 1e-08
Identities = 42/129 (32%), Positives = 73/129 (56%)
Frame = +2
Query: 164 KDRVTQTHQGYGFVEFMGEEDADYAIKVMNMIKLYGKPVRVNKASAHQKNLDVGANVFIG 343
K+ ++ H G+V + E+A+ AI N ++ G +RV+ AS + K D +VFIG
Sbjct: 4 KEFHSERHTLNGYVVYKAAENANQAI-ASNGEEIDGFHIRVDLAS-NDKAHDHQRSVFIG 61
Query: 344 NLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQ 523
NL +++E+ L + F+ G + ++ +++RD +TG K F ++ F S +A A++ MNN
Sbjct: 62 NLPFDIEEEPLRELFTTCGNV-ESVRLIRDRKTGIGKGFGYVLFESKDAVVFALK-MNNA 119
Query: 524 YLCNRPISV 550
R I V
Sbjct: 120 EFKGRKIRV 128
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/73 (32%), Positives = 42/73 (57%)
Frame = +2
Query: 68 TIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKV 247
++++G L + E L ELF G V +V + +DR T +G+G+V F ++ +A+K
Sbjct: 57 SVFIGNLPFDIEEEPLRELFTTCGNVESVRLIRDRKTGIGKGFGYVLFESKDAVVFALK- 115
Query: 248 MNMIKLYGKPVRV 286
MN + G+ +RV
Sbjct: 116 MNNAEFKGRKIRV 128
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 56.8 bits (131), Expect = 1e-08
Identities = 33/97 (34%), Positives = 59/97 (60%)
Frame = +2
Query: 23 EKMAAGPIAERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGF 202
+K ++G A+R+ +++VG + +E L E+F + GPV++ + DR T +GYGF
Sbjct: 13 QKQSSGA-ADRSL-RSVFVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGF 70
Query: 203 VEFMGEEDADYAIKVMNMIKLYGKPVRVNKASAHQKN 313
E+ +E A A++ +N +L G+ +RV+ A A +KN
Sbjct: 71 CEYKDQETALSAMRNLNGYELNGRALRVDSA-ASEKN 106
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/77 (29%), Positives = 40/77 (51%)
Frame = +2
Query: 329 NVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIE 508
+VF+GN+ E E+ L + FS G ++ +++ D ETG K + F + E + +A+
Sbjct: 26 SVFVGNIPYEASEEQLKEIFSEVGPVISF-RLVFDRETGKPKGYGFCEYKDQETALSAMR 84
Query: 509 AMNNQYLCNRPISVSYA 559
+N L R + V A
Sbjct: 85 NLNGYELNGRALRVDSA 101
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 56.8 bits (131), Expect = 1e-08
Identities = 46/171 (26%), Positives = 85/171 (49%), Gaps = 6/171 (3%)
Frame = +2
Query: 62 DATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYA- 238
++ ++VG L TE+ +L G + + + + VT +GYGFVE+ E+A A
Sbjct: 112 ESLLFVGNLPFEFTETQFGDLMSPYGNIERLFLVRSEVTGDSKGYGFVEYATRENAMQAK 171
Query: 239 IKVMNMIKLY--GKPVRVNKASAHQKN-LDV-GANVFIGNLDPEV-DEKLLYDTFSAFGV 403
+++N Y G+ +RV A ++ DV +F+ L + + L+ + FS G
Sbjct: 172 QQLLNTASKYIGGRILRVAFAESNLLTYADVHSRTLFVDRLPRDFKNGGLIKELFSQTGN 231
Query: 404 ILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYLCNRPISVSY 556
+ +V +P G S+ FAF+++A+ E ++ A N + + I V+Y
Sbjct: 232 V-TFAQVAINPANGGSRGFAFVDYATAEEAEKGQRAHNGRQVEGSNIRVAY 281
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 56.4 bits (130), Expect = 2e-08
Identities = 38/177 (21%), Positives = 78/177 (44%)
Frame = +2
Query: 41 PIAERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGE 220
P + T+ V + +T+ +F + N + + + + G+GFV++
Sbjct: 39 PQEAQESKTTLIVNYIPQDMTDQTFRMMFEAVASLNNCKIVRHKPSGWSYGFGFVDYNTT 98
Query: 221 EDADYAIKVMNMIKLYGKPVRVNKASAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFG 400
EDA AI +N + K ++V + N GAN+++ N+ ++ E F A+G
Sbjct: 99 EDAQKAIDKLNGFTIGNKVLKVAFSRPGGDNTK-GANLYVCNIPKQLPEAEFRKAFEAYG 157
Query: 401 VILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYLCNRPISVSYAFKKD 571
I+ +++RD TG K F+ + + AAI +++ + + + + D
Sbjct: 158 NIVNC-RLLRDKSTGLPKGCGFVLYDKKAEAQAAISSLSGTFFPGSTMGLQIRYADD 213
Score = 34.3 bits (75), Expect = 0.072
Identities = 17/77 (22%), Positives = 38/77 (49%)
Frame = +2
Query: 323 GANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAA 502
G +++ N+ + +++ + F G++ + +M D + K F F+ A+ E + A
Sbjct: 274 GCTLYVYNIGYDANQEGITALFGQCGIVNKVD-IMWDWQRQQCKGFCFVTMATQEEAQNA 332
Query: 503 IEAMNNQYLCNRPISVS 553
I+ +N N+P+ S
Sbjct: 333 IQTLNGFMYTNKPLQSS 349
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 54.8 bits (126), Expect = 5e-08
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 5/121 (4%)
Frame = +2
Query: 59 QDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQG-YGFVEFMGEEDADY 235
++ ++YVG LD + T+ L+ +F + VV M + T +G Y FVEF DA
Sbjct: 367 ENRSLYVGNLDPKCTQELICSIFNKIAKVVRCKMIN---SPTDKGPYCFVEFETHADAQE 423
Query: 236 AIKVMNMIKLYGKPVRVNKASAH--QKNLDVG--ANVFIGNLDPEVDEKLLYDTFSAFGV 403
A M+ + K ++VN A+ H K D ++F+G+L VD LL TF FG
Sbjct: 424 AKFRMDQRTVMDKKLKVNWATNHPGMKRGDTNNHFHIFVGDLAENVDNALLRKTFEPFGE 483
Query: 404 I 406
I
Sbjct: 484 I 484
Score = 54.4 bits (125), Expect = 6e-08
Identities = 42/123 (34%), Positives = 60/123 (48%), Gaps = 16/123 (13%)
Frame = +2
Query: 152 VHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVMNMIKLYGKPVRVNKASA---------- 301
V + KD +G+GFV F+ EDA AI M+ + + GK V+ N A+
Sbjct: 542 VRVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQVKTNWAARKNNPTQTKPL 601
Query: 302 ------HQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFA 463
HQ + + V++GNL P+V + L FS +G IL+T KV D K +A
Sbjct: 602 VWDDVFHQSS-QLNTTVYVGNLPPDVKDYELQQMFSQYGSILET-KVFAD------KGYA 653
Query: 464 FIN 472
FIN
Sbjct: 654 FIN 656
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = +2
Query: 419 KVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYLCNRPISVSYAFKKD 571
+V++DP SK F F++F E + AI M++ + + + ++A +K+
Sbjct: 543 RVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQVKTNWAARKN 593
Score = 31.5 bits (68), Expect = 0.51
Identities = 15/77 (19%), Positives = 42/77 (54%)
Frame = +2
Query: 329 NVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIE 508
++++GNLDP+ ++L+ F+ +++ K++ P + + F+ F + + A
Sbjct: 370 SLYVGNLDPKCTQELICSIFNKIAKVVRC-KMINSPT--DKGPYCFVEFETHADAQEAKF 426
Query: 509 AMNNQYLCNRPISVSYA 559
M+ + + ++ + V++A
Sbjct: 427 RMDQRTVMDKKLKVNWA 443
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 53.2 bits (122), Expect = 1e-07
Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 3/152 (1%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
+ V GL TES + E F + G + + D T+ +G+GFV F +EDA +
Sbjct: 117 LIVLGLPYATTESEMKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKDEDAKNVLSTS 176
Query: 251 NMIKLYGKPVRVNKASAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVI--LQTPKV 424
+ I+ G+ V + ++ L+V +F+G L EK L + F+ FG + + PK
Sbjct: 177 HRIQ--GRLCEV-RLPRPKEELNVPKKLFVGRLPESTTEKTLMEYFAQFGEVTDVYIPKP 233
Query: 425 MRDPETGNSKAFAFINFASF-EASDAAIEAMN 517
R F F+ FAS A E MN
Sbjct: 234 FRH--------FGFVTFASVANCVSIAFENMN 257
Score = 36.3 bits (80), Expect = 0.018
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +2
Query: 41 PIAERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEF 211
P E N ++VG L + TE L E F Q G V +V++PK + +GFV F
Sbjct: 191 PKEELNVPKKLFVGRLPESTTEKTLMEYFAQFGEVTDVYIPK-----PFRHFGFVTF 242
>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
Length = 328
Score = 53.2 bits (122), Expect = 1e-07
Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 2/170 (1%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
++VGGL T+ L E F + G +V V + D +T +G+ FV+F + +AD AI
Sbjct: 31 LFVGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRGFAFVQFKHQSEAD-AIDPK 89
Query: 251 NMIKLYGKP--VRVNKASAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKV 424
+ GKP +RV K +F+G L PE ++ + + F ++ +
Sbjct: 90 PAAPI-GKPPHLRVKK-------------IFVGGLKPETSDEKIREYFGKAYAPVKEIEY 135
Query: 425 MRDPETGNSKAFAFINFASFEASDAAIEAMNNQYLCNRPISVSYAFKKDV 574
+ + + + F F++F S + D E + N+ + V A K+V
Sbjct: 136 ITEHSSNRRRGFCFVSFDSEDTVDKICETQFHNIEGNK-VEVKRALPKEV 184
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/72 (36%), Positives = 43/72 (59%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
+YVG L +TE+++ +F G V +V + D T +GYGFV+F E A A++ M
Sbjct: 244 LYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRAMEQM 303
Query: 251 NMIKLYGKPVRV 286
N +L G+P+++
Sbjct: 304 NGFELAGRPLKI 315
>SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21)
Length = 304
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/67 (37%), Positives = 40/67 (59%)
Frame = +2
Query: 53 RNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDAD 232
+++ ATI V L + ES L ELF GP+ + + KD+ T +G+ F+ F+ EDA
Sbjct: 177 QHETATIRVTNLSEETRESDLQELFRPLGPISRIFLAKDKFTNQSKGFAFINFVHREDAA 236
Query: 233 YAIKVMN 253
AI+V++
Sbjct: 237 RAIEVLS 243
Score = 36.7 bits (81), Expect = 0.014
Identities = 23/64 (35%), Positives = 32/64 (50%)
Frame = +2
Query: 326 ANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAI 505
A + + NL E E L + F G I + + +D T SK FAFINF E + AI
Sbjct: 181 ATIRVTNLSEETRESDLQELFRPLGPISRI-FLAKDKFTNQSKGFAFINFVHREDAARAI 239
Query: 506 EAMN 517
E ++
Sbjct: 240 EVLS 243
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 51.6 bits (118), Expect = 4e-07
Identities = 44/173 (25%), Positives = 75/173 (43%), Gaps = 4/173 (2%)
Frame = +2
Query: 68 TIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKV 247
T+ + GL +TE +++ + G V P V + F +DA A+
Sbjct: 161 TVILSGLPASITEKQIYKRCRKLGEVEKTIFP---VAGHDSPTASLLFKSYKDARQAVAK 217
Query: 248 MNMIKLYGKPVRVNKASAHQKNLDVGAN---VFIGNLDPEVDEKLLYDTFSAFGVILQTP 418
+N L G V+ S + + G+ + I NL E +L +TFSAFG + +
Sbjct: 218 LNGKTLKGVKVKAVIESKDKSSSPKGSKKSRLIIRNLAFNCTEAILKETFSAFGEVSEAS 277
Query: 419 KVMRDPETGNSK-AFAFINFASFEASDAAIEAMNNQYLCNRPISVSYAFKKDV 574
+ N K F F+ F + + A+E MN + + RP++V +A K +
Sbjct: 278 VPQKKVGRRNRKMGFGFVQFTNVFDAAKALEEMNAKKILGRPVAVDWAVPKSM 330
Score = 45.2 bits (102), Expect = 4e-05
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = +2
Query: 56 NQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQ--GYGFVEFMGEEDA 229
++ + + + L TE++L E F G V +P+ +V + ++ G+GFV+F DA
Sbjct: 244 SKKSRLIIRNLAFNCTEAILKETFSAFGEVSEASVPQKKVGRRNRKMGFGFVQFTNVFDA 303
Query: 230 DYAIKVMNMIKLYGKPVRVNKA 295
A++ MN K+ G+PV V+ A
Sbjct: 304 AKALEEMNAKKILGRPVAVDWA 325
Score = 37.9 bits (84), Expect = 0.006
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Frame = +2
Query: 68 TIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTH-QGYGFVEFMGEEDADYAIK 244
TI+V L +T++ F + GP+ + KD+ Q +G+G+V F EED A+K
Sbjct: 21 TIFVRNLPYNITDAEFKSAFEEIGPLKRGFIVKDKDNQNRCRGFGYVTFALEED---ALK 77
Query: 245 VMNMIK-LYGKPVRVN 289
+ IK + G+P+ ++
Sbjct: 78 AKDNIKSIKGRPIHLD 93
>SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25)
Length = 159
Score = 51.2 bits (117), Expect = 6e-07
Identities = 28/75 (37%), Positives = 40/75 (53%)
Frame = +2
Query: 335 FIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAM 514
+IGNL VDE+ L + F V+ KV+ D ETG + F F+ F S E + AI+
Sbjct: 8 YIGNLSYSVDEQALEEKFHGCDVV--DVKVITDRETGRPRGFGFVTFGSKEEMEKAIDEF 65
Query: 515 NNQYLCNRPISVSYA 559
+ Q RP+ V+ A
Sbjct: 66 DGQDFDGRPMKVNQA 80
Score = 44.4 bits (100), Expect = 7e-05
Identities = 27/74 (36%), Positives = 40/74 (54%)
Frame = +2
Query: 74 YVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVMN 253
Y+G L V E L E F VV+V + DR T +G+GFV F +E+ + AI +
Sbjct: 8 YIGNLSYSVDEQALEEKF-HGCDVVDVKVITDRETGRPRGFGFVTFGSKEEMEKAIDEFD 66
Query: 254 MIKLYGKPVRVNKA 295
G+P++VN+A
Sbjct: 67 GQDFDGRPMKVNQA 80
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 51.2 bits (117), Expect = 6e-07
Identities = 29/82 (35%), Positives = 43/82 (52%)
Frame = +2
Query: 323 GANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAA 502
G ++IGNL+ DE + F FGV + ++RD E+G S+ F F+ S + A
Sbjct: 8 GRKLYIGNLNFNSDEGEIEQAFEEFGV--EKVDILRDKESGRSRGFGFVLLQSADQIAPA 65
Query: 503 IEAMNNQYLCNRPISVSYAFKK 568
IE MN + R I+V+ A K
Sbjct: 66 IEKMNQSSVGGRNITVALALDK 87
>SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 48.4 bits (110), Expect = 4e-06
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 24/191 (12%)
Frame = +2
Query: 59 QDATIYVGGLDDRVTESLLWELFVQSGPVVNVH-MPKDRV----TQTHQGYGFVEFMGEE 223
Q +YVG + VTE+L+ E F ++ P + V T Q + F+E E
Sbjct: 561 QARRLYVGNIPFGVTENLMIEFFNAKMKEAKLNTAPGNPVIAAQINTEQNFAFIELRSVE 620
Query: 224 DADYAIKVMNMIKLYGKPVRVNK-------------ASAHQKNL------DVGANVFIGN 346
+ A+ +I L G+ +++ + AS H + D +FIG
Sbjct: 621 ETTQAMAFDGII-LQGQALKIRRPKDYQPIPGMSENASVHVPGVVSTVVPDSPHKIFIGG 679
Query: 347 LDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQY 526
L ++E + + S+FG L+ +++D TG SK +AF + +D AI+ +N
Sbjct: 680 LPNYLNEDQVKELLSSFGE-LRAFNLVKDSATGLSKGYAFCEYVDLGITDVAIQGLNGMQ 738
Query: 527 LCNRPISVSYA 559
L ++ + V A
Sbjct: 739 LGDKKLIVQRA 749
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/80 (31%), Positives = 42/80 (52%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
I++GGL + + E + EL G + ++ KD T +GY F E++ D AI+ +
Sbjct: 675 IFIGGLPNYLNEDQVKELLSSFGELRAFNLVKDSATGLSKGYAFCEYVDLGITDVAIQGL 734
Query: 251 NMIKLYGKPVRVNKASAHQK 310
N ++L K + V +AS K
Sbjct: 735 NGMQLGDKKLIVQRASVGAK 754
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 48.0 bits (109), Expect = 5e-06
Identities = 28/75 (37%), Positives = 43/75 (57%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
+++GGL + VTE++L ELF + GPV +V + +D ++ Q GFV F + A+ A M
Sbjct: 526 VWIGGLSEDVTENVLLELFNKFGPVKDVVILRDESGKSRQS-GFVHFWSSDVAEAANVGM 584
Query: 251 NMIKLYGKPVRVNKA 295
N + GK V A
Sbjct: 585 NGCDILGKIVETKYA 599
>SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 48.0 bits (109), Expect = 5e-06
Identities = 24/77 (31%), Positives = 44/77 (57%)
Frame = +2
Query: 332 VFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEA 511
+F+ N+ E E +++ FS +G I + V D TG K +A + + +F+ + +A+EA
Sbjct: 295 LFVTNIHEEAQEDDIHELFSDYGEI-KNLHVNLDRRTGFIKGYALVEYETFKEAQSALEA 353
Query: 512 MNNQYLCNRPISVSYAF 562
+N + + ISV +AF
Sbjct: 354 LNGAEMLGQNISVDWAF 370
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/75 (28%), Positives = 41/75 (54%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
++V + + E + ELF G + N+H+ DR T +GY VE+ ++A A++ +
Sbjct: 295 LFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYETFKEAQSALEAL 354
Query: 251 NMIKLYGKPVRVNKA 295
N ++ G+ + V+ A
Sbjct: 355 NGAEMLGQNISVDWA 369
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 47.6 bits (108), Expect = 7e-06
Identities = 30/97 (30%), Positives = 49/97 (50%)
Frame = +2
Query: 281 RVNKASAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAF 460
R+ K S + +IGNLD +V+E L D FS + V+ +V+ D ET + F
Sbjct: 215 RLLKYSYFDLKMGEECKCYIGNLDFKVNEADLQDRFSRYDVV--DVQVISDRETQRPRGF 272
Query: 461 AFINFASFEASDAAIEAMNNQYLCNRPISVSYAFKKD 571
AF+ F S + + AI ++ Q R + V+ A ++
Sbjct: 273 AFVTFGSKKNMEDAINELDGQEFDGRSMKVNQARSRE 309
Score = 41.9 bits (94), Expect = 4e-04
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Frame = +2
Query: 122 LFVQSGP--VVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVMNMIKLYGKPVRVNKA 295
LF+++G +++V + DR T +G+GFV F E++ D AI + L G+P++VNKA
Sbjct: 26 LFLRNGSKFLLSVKVITDRETGRPRGFGFVTFGSEDEMDKAIDKFDGEDLDGRPMKVNKA 85
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +2
Query: 407 LQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYLCNRPISVSYA 559
L + KV+ D ETG + F F+ F S + D AI+ + + L RP+ V+ A
Sbjct: 35 LLSVKVITDRETGRPRGFGFVTFGSEDEMDKAIDKFDGEDLDGRPMKVNKA 85
>SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23)
Length = 362
Score = 47.2 bits (107), Expect = 1e-05
Identities = 31/109 (28%), Positives = 56/109 (51%)
Frame = +2
Query: 245 VMNMIKLYGKPVRVNKASAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKV 424
++ ++ +Y V + K S + D G+N+FI +L E + L TF FG ++ + KV
Sbjct: 252 ILTVLSVYCAAVLL-KESHYTPGPD-GSNLFIYHLPQEFTDADLMQTFQPFGTVI-SAKV 308
Query: 425 MRDPETGNSKAFAFINFASFEASDAAIEAMNNQYLCNRPISVSYAFKKD 571
D +T SK F F+++ + ++ AI+ MN + + + V KD
Sbjct: 309 FIDKQTNMSKCFGFVSYDNVMSAQNAIQHMNGFQIGAKRLKVQLKRPKD 357
>SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 628
Score = 46.0 bits (104), Expect = 2e-05
Identities = 20/58 (34%), Positives = 34/58 (58%)
Frame = +2
Query: 134 SGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVMNMIKLYGKPVRVNKASAHQ 307
+GP+ NV +P D+ T + +GFVEF YA ++++ I+LY + + V S +Q
Sbjct: 480 AGPLENVRIPTDKNTGQQRSFGFVEFSSPVSVHYASELLDGIRLYDRAINVKPQSNNQ 537
>SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18)
Length = 209
Score = 45.6 bits (103), Expect = 3e-05
Identities = 27/76 (35%), Positives = 42/76 (55%)
Frame = +2
Query: 332 VFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEA 511
+F+ L+P ++ L FS FG IL +V+RD +TG S +AFI F E + A
Sbjct: 122 LFVCKLNPVTTDEDLEIIFSRFGTILSC-EVIRDQKTGESLQYAFIEFEKDEDCERAYFK 180
Query: 512 MNNQYLCNRPISVSYA 559
M+N + +R I V ++
Sbjct: 181 MDNVLIDDRRIHVDFS 196
Score = 33.1 bits (72), Expect = 0.17
Identities = 19/83 (22%), Positives = 42/83 (50%)
Frame = +2
Query: 62 DATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAI 241
D ++V L+ T+ L +F + G +++ + +D+ T Y F+EF +ED + A
Sbjct: 119 DNVLFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRDQKTGESLQYAFIEFEKDEDCERAY 178
Query: 242 KVMNMIKLYGKPVRVNKASAHQK 310
M+ + + + + V+ + + K
Sbjct: 179 FKMDNVLIDDRRIHVDFSQSVSK 201
>SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 44.4 bits (100), Expect = 7e-05
Identities = 22/78 (28%), Positives = 42/78 (53%)
Frame = +2
Query: 326 ANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAI 505
+ V++GNL + L+ F +G +++ ++RD ET S+ AFI F +++ A+
Sbjct: 10 STVYVGNLPYSLTNSDLHKVFERYGKVVKVT-ILRDKETRESRGVAFILFIDRQSAQNAV 68
Query: 506 EAMNNQYLCNRPISVSYA 559
A+N + + R I + A
Sbjct: 69 AAVNKKQMFGRTIKCTIA 86
>SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18)
Length = 291
Score = 44.0 bits (99), Expect = 9e-05
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Frame = +2
Query: 53 RNQDAT---IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEE 223
RNQD ++VGG+ + L + F Q G + + KDRVT+ +GYGFV +
Sbjct: 3 RNQDTKFTKLFVGGIPYESGDDALRKFFAQFGEIREAVVIKDRVTKKSKGYGFVTMATSD 62
Query: 224 DADYAIKVMNMIKLYGKPVRVNKA 295
A+ A K + + G+ VN A
Sbjct: 63 AAELACKNKRPM-IEGRQANVNLA 85
>SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 420
Score = 43.2 bits (97), Expect = 2e-04
Identities = 36/133 (27%), Positives = 60/133 (45%)
Frame = +2
Query: 8 AVKSFEKMAAGPIAERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTH 187
AV + P +++VGGL E L + F Q G V +V + + + +
Sbjct: 61 AVSRYNSTLPSPKDIEKNSRSVFVGGLASGTDEEGLKDYFEQFGEVESVRIMRTFLGYS- 119
Query: 188 QGYGFVEFMGEEDADYAIKVMNMIKLYGKPVRVNKASAHQKNLDVGANVFIGNLDPEVDE 367
+ YGFV F + + +K ++I GK V V K+ +N V +++G L E
Sbjct: 120 RNYGFVLFKDDGPSKEVLKKSHVIN--GKTVDVGKS----RNFRV---IYVGGLPSHFTE 170
Query: 368 KLLYDTFSAFGVI 406
+ + + F FGVI
Sbjct: 171 QTVREHFKKFGVI 183
Score = 30.7 bits (66), Expect = 0.89
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 281 RVNKASAHQKNLDVGA-NVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKA 457
R N K+++ + +VF+G L DE+ L D F FG + ++ ++MR G S+
Sbjct: 64 RYNSTLPSPKDIEKNSRSVFVGGLASGTDEEGLKDYFEQFGEV-ESVRIMR-TFLGYSRN 121
Query: 458 FAFINF 475
+ F+ F
Sbjct: 122 YGFVLF 127
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/72 (29%), Positives = 39/72 (54%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
+YV L V + + E+F G V V +P DR +G+ +VE++ E+ + A+K M
Sbjct: 1159 LYVAHLTRNVNKDHVQEIFSVYGRVKTVDLPTDRTNNLSRGFAYVEYVDPEECEKALKHM 1218
Query: 251 NMIKLYGKPVRV 286
+ ++ G+ + V
Sbjct: 1219 DGGQIDGQEIAV 1230
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 41.5 bits (93), Expect = 5e-04
Identities = 34/153 (22%), Positives = 68/153 (44%), Gaps = 9/153 (5%)
Frame = +2
Query: 65 ATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAI- 241
A ++VGGL+ T L E F G + +V + D T+ +G+G+V F + +
Sbjct: 14 AKLFVGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVTFADYKVTRNVLK 73
Query: 242 -KVMN-MIKLYGKPVRVNKASAHQKNL----DVGANVFIGNLDPEVDEKLLYDTFSAF-- 397
KV N ++ GK V V +A N + +F+G L + ++ + + +
Sbjct: 74 DKVENGAHRIDGKEVEVKRAIPRDDNSATSHEKTKKIFVGGLPEDATKEDIQEAIESLLE 133
Query: 398 GVILQTPKVMRDPETGNSKAFAFINFASFEASD 496
+ + +M+ + + FAF+ + + +D
Sbjct: 134 EKVDKVDLIMKKEDETKHRGFAFVELNNEDQAD 166
Score = 36.7 bits (81), Expect = 0.014
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +2
Query: 311 NLDVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEA 490
N D A +F+G L+ E + L + F A+G + V+ D T S+ F ++ FA ++
Sbjct: 9 NNDPRAKLFVGGLNRETTNETLREYFEAYGELTDV-VVICDSATKKSRGFGYVTFADYKV 67
Query: 491 S 493
+
Sbjct: 68 T 68
>SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 41.1 bits (92), Expect = 6e-04
Identities = 22/75 (29%), Positives = 37/75 (49%)
Frame = +2
Query: 332 VFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEA 511
+F+GNL+ + + L +F FGV+L ++ P G +AF+ FA + + A A
Sbjct: 239 LFVGNLETGISCQDLRLSFEKFGVVLDVD--IKRPARGQGNTYAFVKFADLDVAAKAKCA 296
Query: 512 MNNQYLCNRPISVSY 556
M Q + I + Y
Sbjct: 297 MQGQCIGRNHIKIGY 311
>SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/79 (29%), Positives = 42/79 (53%)
Frame = +2
Query: 17 SFEKMAAGPIAERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGY 196
SF+ P E + ++ V L R T L ++F + G + ++++P+DR T +G+
Sbjct: 2 SFDSQRGPP--EIDGMTSLKVDNLTYRTTVEDLKQVFKKYGDLGDIYIPRDRNTHESRGF 59
Query: 197 GFVEFMGEEDADYAIKVMN 253
FV F + DA+ A+ M+
Sbjct: 60 AFVRFYEKRDAEDAMDCMD 78
>SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/73 (30%), Positives = 39/73 (53%)
Frame = +2
Query: 68 TIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKV 247
T++V L ES + ELF + G V V + +R + +GYG+VE+ E A A+
Sbjct: 172 TLFVSNLPFDAKESEIEELFSKHGVVKQVRLVTNRAGKP-KGYGYVEYEQESSASTAVLT 230
Query: 248 MNMIKLYGKPVRV 286
++ ++ G+ + V
Sbjct: 231 LDKTEVKGRTISV 243
>SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07)
Length = 252
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/100 (28%), Positives = 47/100 (47%)
Frame = +2
Query: 260 KLYGKPVRVNKASAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPE 439
+L +P++ NK + + ++ V NV E K L + V + ++ D E
Sbjct: 81 RLLSQPLKKNKKT-NTMSIHVPTNV-------EDSVKCLVASIPLCFVASEAVNIITDRE 132
Query: 440 TGNSKAFAFINFASFEASDAAIEAMNNQYLCNRPISVSYA 559
TG + F F+ F S E + AI+ + Q L RP+ V+ A
Sbjct: 133 TGRPRGFGFVTFGSKEEMEKAIDEFDGQDLDGRPMKVNEA 172
Score = 35.9 bits (79), Expect = 0.024
Identities = 18/48 (37%), Positives = 30/48 (62%)
Frame = +2
Query: 152 VHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVMNMIKLYGKPVRVNKA 295
V++ DR T +G+GFV F +E+ + AI + L G+P++VN+A
Sbjct: 125 VNIITDRETGRPRGFGFVTFGSKEEMEKAIDEFDGQDLDGRPMKVNEA 172
>SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 268
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/60 (35%), Positives = 34/60 (56%)
Frame = +2
Query: 317 DVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASD 496
D+ +F+ + E E L F +GV+ ++ K++RD + G SK +AFI F S E +D
Sbjct: 5 DISKRIFVKGFNRETTESELRAFFEEYGVVKES-KIVRD-KHGVSKGYAFITFESQEVAD 62
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 38.7 bits (86), Expect = 0.003
Identities = 26/80 (32%), Positives = 43/80 (53%)
Frame = +2
Query: 329 NVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIE 508
+VF+GNL + DE+ L F G + T +V+ + G S+ F + +F S E + A+E
Sbjct: 181 SVFLGNLSFDADEETLAAFFEEKG-LSATCRVI--TQEGRSRGFGYADFTSKEDYNKALE 237
Query: 509 AMNNQYLCNRPISVSYAFKK 568
+N + C R I ++ A K
Sbjct: 238 -LNGEDCCGREIRINPANSK 256
Score = 36.7 bits (81), Expect = 0.014
Identities = 41/190 (21%), Positives = 80/190 (42%), Gaps = 23/190 (12%)
Frame = +2
Query: 59 QDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQT--HQGYGFVEFMGEEDAD 232
++ ++++G L E L F + G + +TQ +G+G+ +F +ED +
Sbjct: 178 EEMSVFLGNLSFDADEETLAAFFEEKGLSATCRV----ITQEGRSRGFGYADFTSKEDYN 233
Query: 233 YAIKVMNMIKLYGKPVRVNKASAHQK----NLDVGA-------NVFIGNLDPE------V 361
A++ +N G+ +R+N A++ N G F G D +
Sbjct: 234 KALE-LNGEDCCGREIRINPANSKPSRGGGNTPRGGGRGRGGRGGFSGGRDQNPPNSSLI 292
Query: 362 DEKLLYDTFS-AFGVILQ---TPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYL 529
L YDT + + G + KV+ D E+G S+ F F+++ E + + M +
Sbjct: 293 VRNLSYDTTTDSLGAAFEGCSNAKVIFDRESGESRGFGFVDYDDVETAKKVLSEMAGAEV 352
Query: 530 CNRPISVSYA 559
R + + +A
Sbjct: 353 DGRQVRLDFA 362
>SB_43406| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 576
Score = 38.3 bits (85), Expect = 0.004
Identities = 31/84 (36%), Positives = 43/84 (51%)
Frame = +2
Query: 68 TIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKV 247
T++V G+ +TE +L E F G V V+ K+R GFV F E AD AI
Sbjct: 111 TVFVSGIG--LTEEILKEEFNHLGHVERVNFEKNR------SQGFVTFDTWEAADKAIDE 162
Query: 248 MNMIKLYGKPVRVNKASAHQKNLD 319
MN +K+ +RV+ A Q N+D
Sbjct: 163 MNGLKVQHVHIRVSMA-RRQPNMD 185
>SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15)
Length = 171
Score = 38.3 bits (85), Expect = 0.004
Identities = 19/68 (27%), Positives = 35/68 (51%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
IY+G + E+ + + F Q G V + + + + + +GY FVEF +E A A M
Sbjct: 100 IYLGHIPHGFFENEIKKFFEQFGTVNRIRLSRSKKSARSKGYAFVEFACDEVAKIAADTM 159
Query: 251 NMIKLYGK 274
+ ++G+
Sbjct: 160 HNYMMFGR 167
Score = 35.9 bits (79), Expect = 0.024
Identities = 22/93 (23%), Positives = 43/93 (46%)
Frame = +2
Query: 260 KLYGKPVRVNKASAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPE 439
K + V+ K + L G +++G++ E + F FG + + ++ R +
Sbjct: 77 KEFEDKVKKIKPKGDEDELSPGV-IYLGHIPHGFFENEIKKFFEQFGTVNRI-RLSRSKK 134
Query: 440 TGNSKAFAFINFASFEASDAAIEAMNNQYLCNR 538
+ SK +AF+ FA E + A + M+N + R
Sbjct: 135 SARSKGYAFVEFACDEVAKIAADTMHNYMMFGR 167
>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
Length = 672
Score = 38.3 bits (85), Expect = 0.004
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +2
Query: 62 DATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAI 241
D I+ G L VT+ L F + + + +D+ + +GYGFV F D A+
Sbjct: 216 DFRIFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDPNDFIKAM 275
Query: 242 KVMNMI 259
+ MN++
Sbjct: 276 REMNVL 281
>SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 37.9 bits (84), Expect = 0.006
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPV--VNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIK 244
+++GGL D +E + P + + M +DR T +GY FV F E D +
Sbjct: 106 LFIGGLKDEHSEEDVKTALAPLSPFAPLEIKMVRDRETNKFKGYCFVNFPNEHIVD-KLY 164
Query: 245 VMNMIKLYGKPVRVNKAS 298
++ I++ GK V + KA+
Sbjct: 165 LVRHIQVKGKDVEMKKAA 182
Score = 34.3 bits (75), Expect = 0.072
Identities = 34/145 (23%), Positives = 58/145 (40%), Gaps = 10/145 (6%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQG----YGFVEFM-GEEDADY 235
++VGGL++ TE + F + + +T +G + FVEF G + D
Sbjct: 10 LFVGGLNEDTTEETVRAYFKSFCEGSEADVSSVSLAKTPEGKSRKFCFVEFSNGSDIIDN 69
Query: 236 AIKVMNMIKLYGKPVRVNKASAHQKNLDVG----ANVFIGNLDPEVDEKLLYDTFSAFGV 403
+ + K V V +A ++ +FIG L E E+ + +
Sbjct: 70 IVFNFESHSIDNKQVEVKRAMPRDDPNELAHVRTKKLFIGGLKDEHSEEDVKTALAPLSP 129
Query: 404 ILQTP-KVMRDPETGNSKAFAFINF 475
K++RD ET K + F+NF
Sbjct: 130 FAPLEIKMVRDRETNKFKGYCFVNF 154
>SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/58 (29%), Positives = 34/58 (58%)
Frame = +2
Query: 137 GPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVMNMIKLYGKPVRVNKASAHQK 310
G +VNV++ +D+ T +G+ F+ + + A+ N IKL G+ +RV+ S +++
Sbjct: 3 GEIVNVNLVRDKKTGKQKGFCFLCYEDQRSTILAVDNFNGIKLGGRTIRVDHCSNYRR 60
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +2
Query: 395 FGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYLCNRPISVSY 556
+G I+ ++RD +TG K F F+ + ++ A++ N L R I V +
Sbjct: 2 YGEIVNV-NLVRDKKTGKQKGFCFLCYEDQRSTILAVDNFNGIKLGGRTIRVDH 54
>SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13)
Length = 1463
Score = 37.1 bits (82), Expect = 0.010
Identities = 24/79 (30%), Positives = 40/79 (50%)
Frame = +2
Query: 65 ATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIK 244
+TI+VG L VT+ L +F + G + ++ + R G +++ EDA A+
Sbjct: 541 STIWVGHLAKIVTQDTLQGIFEEHGTITSIDLIPPR------GCAYIQMEKREDAYRALD 594
Query: 245 VMNMIKLYGKPVRVNKASA 301
+ IKLYG V++ A A
Sbjct: 595 KLRNIKLYGNSVKLAWAPA 613
>SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 558
Score = 36.7 bits (81), Expect = 0.014
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Frame = +2
Query: 29 MAAGPIAERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHM---PKDRVTQTHQGYG 199
+AA I + + +++G LD R++E + ++ Q G + + +GY
Sbjct: 375 LAAPEIDDAVSERKLWIGNLDKRLSEFNILKILQQFGEIEHFQFLFHGNGPNRGEPRGYC 434
Query: 200 FVEFMGEEDADYAIKVMNMIKLYGKPVRVNKASAHQKNLD 319
FVEF +EDA A++ +N + + + V+ A H+ + D
Sbjct: 435 FVEFKKKEDARKALRGLNKKIVLSRALVVDWAHHHKSSAD 474
>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
Length = 507
Score = 36.7 bits (81), Expect = 0.014
Identities = 24/86 (27%), Positives = 40/86 (46%)
Frame = +2
Query: 29 MAAGPIAERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVE 208
M++ + D +YVG L V E L ++F + G + +V + R + FVE
Sbjct: 249 MSSNMNRSNSNDCRVYVGNLPQDVREKDLHDIFYKYGHIADVDLKNRR--GAGPPFAFVE 306
Query: 209 FMGEEDADYAIKVMNMIKLYGKPVRV 286
F DA+ A+K + + G +RV
Sbjct: 307 FEDPRDAEDAVKGRDGHEFDGYRIRV 332
Score = 31.9 bits (69), Expect = 0.39
Identities = 21/75 (28%), Positives = 33/75 (44%)
Frame = +2
Query: 332 VFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEA 511
V++GNL +V EK L+D F +G I R G FAF+ F ++ A++
Sbjct: 263 VYVGNLPQDVREKDLHDIFYKYGHIADVDLKNR---RGAGPPFAFVEFEDPRDAEDAVKG 319
Query: 512 MNNQYLCNRPISVSY 556
+ I V +
Sbjct: 320 RDGHEFDGYRIRVEF 334
>SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 36.3 bits (80), Expect = 0.018
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +2
Query: 317 DVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASD 496
++ VF+ NLDPE+ ++L FS+ G I + + G +A+I FA +A
Sbjct: 69 EIRRTVFVNNLDPEITAEMLLSFFSSCGDI---KYIRMGGDDGKPTRYAYIEFAETQAIV 125
Query: 497 AAIE 508
+A++
Sbjct: 126 SALQ 129
>SB_34470| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 35.9 bits (79), Expect = 0.024
Identities = 26/84 (30%), Positives = 39/84 (46%)
Frame = +2
Query: 47 AERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEED 226
A N + + V L R L + Q+G V KDRV G G +F E D
Sbjct: 337 APYNTEYRLIVENLSTRAGWQDLKDYMRQAGEVTFTQCHKDRV-----GEGVCDFSNESD 391
Query: 227 ADYAIKVMNMIKLYGKPVRVNKAS 298
YA+K ++ +L+GK +R+ + S
Sbjct: 392 MLYALKKLDGTELFGKRIRLVEIS 415
>SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19)
Length = 168
Score = 35.5 bits (78), Expect = 0.031
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
++VG + + E L +F +GP+ V + D Q ++GY FV + ++DA +K +
Sbjct: 76 VFVGKIPRDLYEDELVPVFETAGPIYEVRLMMDFNGQ-NRGYAFVVYTSKDDAKRCVKTL 134
Query: 251 N 253
N
Sbjct: 135 N 135
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/66 (25%), Positives = 34/66 (51%)
Frame = +2
Query: 323 GANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAA 502
G VF+G + ++ E L F G I + ++M D G ++ +AF+ + S + +
Sbjct: 73 GCEVFVGKIPRDLYEDELVPVFETAGPIYEV-RLMMD-FNGQNRGYAFVVYTSKDDAKRC 130
Query: 503 IEAMNN 520
++ +NN
Sbjct: 131 VKTLNN 136
>SB_52029| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 462
Score = 35.5 bits (78), Expect = 0.031
Identities = 22/82 (26%), Positives = 42/82 (51%)
Frame = +2
Query: 305 QKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASF 484
+ N + VF+ NLD +V+ + L DTF G +++ ++M D E SK + F +
Sbjct: 178 KSNDPAASTVFVTNLDYKVNWQKLKDTFKCAGHVIRA-EIMEDDEK-KSKGMGTVQFETP 235
Query: 485 EASDAAIEAMNNQYLCNRPISV 550
+ A+ ++ + L +R + V
Sbjct: 236 MEAMNAVNLLHGKMLMDRALRV 257
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 35.5 bits (78), Expect = 0.031
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELF-VQSGPVVNVHMPKDRVTQTHQ-------GYGFVEFMGEED 226
+Y G L ++T+ L +F +S V +V + K+ + +Q G+GFV F ED
Sbjct: 52 VYAGNLPFKLTQDELKAVFEAESLTVTDVLIVKEPRNEFYQQQEPRSRGFGFVTFANPED 111
Query: 227 ADYAIKVMNMIKLYGKPVRV 286
A A+K +N ++ G+ +++
Sbjct: 112 AQTAVKSLNGKEVQGRTLKI 131
>SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013)
Length = 665
Score = 35.1 bits (77), Expect = 0.041
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +2
Query: 167 DRVTQTHQGYGFVEFMGEEDADYAIKVMNMIKLYGKPVRVNKA 295
D+ TQ H+G+GFV F E AD A + + K V V KA
Sbjct: 5 DKATQRHRGFGFVTFESENSADKACDTQYHL-INNKKVEVKKA 46
>SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11)
Length = 248
Score = 35.1 bits (77), Expect = 0.041
Identities = 21/62 (33%), Positives = 32/62 (51%)
Frame = +2
Query: 335 FIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAM 514
+IGNL VDE+ L + F V+ +V+ D ETG + F F+ + EA I+ +
Sbjct: 85 YIGNLSYSVDEQALEEKFHDCNVV--DVRVITDRETGRPRGFGFV---TLEAKKTRIKPL 139
Query: 515 NN 520
N
Sbjct: 140 KN 141
>SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23)
Length = 201
Score = 34.7 bits (76), Expect = 0.055
Identities = 19/76 (25%), Positives = 37/76 (48%)
Frame = +2
Query: 332 VFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEA 511
+++GNL D L F FG + + V R+P FAF+ + + ++ A+
Sbjct: 6 LYVGNLGRNADSSELERAFEKFGRLSKV-WVARNPP-----GFAFVEYEDYRDAEEAVRE 59
Query: 512 MNNQYLCNRPISVSYA 559
++ +C+R I V ++
Sbjct: 60 LDGANVCDRTIRVEFS 75
Score = 29.1 bits (62), Expect = 2.7
Identities = 29/110 (26%), Positives = 46/110 (41%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
+YVG L S L F + G + K V + G+ FVE+ DA+ A++ +
Sbjct: 6 LYVGNLGRNADSSELERAFEKFG-----RLSKVWVARNPPGFAFVEYEDYRDAEEAVREL 60
Query: 251 NMIKLYGKPVRVNKASAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFG 400
+ + + +RV + S ++ D G G P L FS FG
Sbjct: 61 DGANVCDRTIRV-EFSNNRGGRDRGGGRPRGRSPPRRSFSTL--EFSLFG 107
>SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 34.7 bits (76), Expect = 0.055
Identities = 21/67 (31%), Positives = 32/67 (47%)
Frame = +2
Query: 323 GANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAA 502
G VFIG + + E L G I + ++ DP TG +K FAF F ++ A
Sbjct: 152 GTEVFIGKIPRDCLEDELIPLLEKCGEIREF-RLQMDPATGLNKGFAFCTFTEQTSAYQA 210
Query: 503 IEAMNNQ 523
I +N++
Sbjct: 211 ITTLNDK 217
>SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 347
Score = 34.3 bits (75), Expect = 0.072
Identities = 23/72 (31%), Positives = 38/72 (52%)
Frame = +2
Query: 245 VMNMIKLYGKPVRVNKASAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKV 424
++ ++ +Y V + K S + D G+N+FI +L E + L TF FG ++ + KV
Sbjct: 204 ILTVLSVYCAAVLL-KESHYTPGPD-GSNLFIYHLPQEFTDADLMQTFQPFGTVI-SAKV 260
Query: 425 MRDPETGNSKAF 460
D +T SK F
Sbjct: 261 FIDKQTNMSKCF 272
>SB_9365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +2
Query: 104 ESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVMNMIKL 265
++++ ++F + G +V H P ++ +GY F+EF DA A+K N KL
Sbjct: 91 KNVIRKVFSKFGQIVTEHYPMEK--DLTRGYIFLEFSNASDAVRAVKTANGYKL 142
>SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1148
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/58 (22%), Positives = 32/58 (55%)
Frame = +2
Query: 68 TIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAI 241
T+++GGL + + E ++ E+F G + ++ + K + + + + + F +E D A+
Sbjct: 352 TVFIGGLPESINEHIINEIFYVCGEITSIRISKGK-GENARKFCHLRFGAKESVDTAV 408
>SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28)
Length = 440
Score = 31.5 bits (68), Expect = 0.51
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 164 KDRVTQTHQGYGFVEFMGEEDADYAIKVMNMIKLYGKPVRVNKA 295
K R +GY +V F +DAD A+ +N + +G + + KA
Sbjct: 28 KVREVDFKEGYAYVVFKENKDADRAVAALNNSEFHGAKILMEKA 71
Score = 30.7 bits (66), Expect = 0.89
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 191 GYGFVEFMGEEDADYAIKVMNMIKLYGKPVRVNK 292
G G VEF EED AI ++ + YGK +R+ +
Sbjct: 139 GEGVVEFTTEEDMKRAIASLDKCEFYGKRIRLRQ 172
>SB_16080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 279
Score = 31.5 bits (68), Expect = 0.51
Identities = 22/80 (27%), Positives = 36/80 (45%)
Frame = +2
Query: 332 VFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEA 511
+F+ NL +V E+ L F F PK++ G K AF+ F E + A
Sbjct: 116 LFLKNLSNKVKEEDLIRLFLRFQQN-GAPKLVFRLMKGRMKGQAFVTFPDSEVAIKAHSL 174
Query: 512 MNNQYLCNRPISVSYAFKKD 571
+N L RP+ + + K++
Sbjct: 175 VNGYRLKGRPVIIEFGRKRE 194
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 31.1 bits (67), Expect = 0.67
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +2
Query: 68 TIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAI-K 244
T+YVGGL+ +VTE L + F Q G + ++ M Q FV F A+ A +
Sbjct: 305 TLYVGGLEGKVTEQDLRDHFYQFGELRSISM------VPRQNCAFVCFTSRAAAEAAADR 358
Query: 245 VMNMIKLYGKPVRV 286
N + L G+ +++
Sbjct: 359 SFNKLILKGRRLKI 372
>SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2388
Score = 31.1 bits (67), Expect = 0.67
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2
Query: 332 VFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSK 454
V L+ VD+K L + +G I QT KV DP+T N++
Sbjct: 142 VLFSGLNDNVDKKFLQEICQKYGTI-QTIKVYYDPQTKNTR 181
>SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 30.7 bits (66), Expect = 0.89
Identities = 20/78 (25%), Positives = 36/78 (46%)
Frame = +2
Query: 326 ANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAI 505
+ V+IGN+ ++ + F FG L+ V R+P FAF F ++ A+
Sbjct: 2 SRVYIGNIGDNASKREIEREFETFGP-LRDVWVARNPP-----GFAFCVFEDRRDAEDAV 55
Query: 506 EAMNNQYLCNRPISVSYA 559
++ +Y+C + V A
Sbjct: 56 RELDGRYICGQRARVELA 73
>SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 30.7 bits (66), Expect = 0.89
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 194 YGFVEFMGEEDADYAIKVMNMIKLYGKPVRVNKASAHQKNLDVG 325
YGF+E+ DA+ A++ N KL+G + V + ++ VG
Sbjct: 41 YGFIEYEDPRDAEEAMRRENNRKLFGSRIVVEYVRSGERGKPVG 84
>SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/81 (25%), Positives = 38/81 (46%)
Frame = +2
Query: 53 RNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDAD 232
R + +Y+G L D ++ + F GP+ +V V + G+ F F DA+
Sbjct: 28 RAEMTKVYIGSLGDNASKREIENEFGYYGPLKDVW-----VARNPPGFAFCIFDDRRDAE 82
Query: 233 YAIKVMNMIKLYGKPVRVNKA 295
A++ ++ + G+ VRV A
Sbjct: 83 DAVRELDGRYICGQRVRVELA 103
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/76 (25%), Positives = 37/76 (48%)
Frame = +2
Query: 332 VFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEA 511
V+IG+L ++ + + F +G L+ V R+P FAF F ++ A+
Sbjct: 34 VYIGSLGDNASKREIENEFGYYGP-LKDVWVARNPP-----GFAFCIFDDRRDAEDAVRE 87
Query: 512 MNNQYLCNRPISVSYA 559
++ +Y+C + + V A
Sbjct: 88 LDGRYICGQRVRVELA 103
>SB_53239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 520
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +2
Query: 98 VTESLLWELFVQSGPVVNVHMPKDRVTQT---HQGYGFVEFMGEEDADYAIK 244
+ E +L LF + GP+ +V + R + ++ GFV +M +D D AIK
Sbjct: 217 MNEEMLMRLFGKYGPLASVKIMWPRTEEEKSRNRNCGFVAYMRRKDGDKAIK 268
>SB_21838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 949
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/37 (32%), Positives = 24/37 (64%)
Frame = +2
Query: 140 PVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
P+ ++ + KD+VT T +G+ FVE E+A ++++
Sbjct: 435 PIYDIRLIKDKVTGTSRGFCFVELATIEEATQLLELI 471
>SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35)
Length = 929
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +2
Query: 164 KDRVTQTHQGYGFVEFMGEEDADYAIKVMNMIKLYGKPVRV 286
K R +GYGFVEF DA+ A+ +N L G+ V V
Sbjct: 714 KIRDISLKRGYGFVEFDDHRDAEDAVHDLNGRDLIGERVVV 754
Score = 29.9 bits (64), Expect = 1.6
Identities = 24/83 (28%), Positives = 39/83 (46%)
Frame = +2
Query: 38 GPIAERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMG 217
GP N ++ V L R + L + F + G V K R+ G G VEF
Sbjct: 791 GPPVRTNY--SVIVENLSSRTSWQDLKDYFRKYGKVTYADAHKKRI-----GEGVVEFES 843
Query: 218 EEDADYAIKVMNMIKLYGKPVRV 286
++D + AI+ ++ +L G+ +RV
Sbjct: 844 KDDLNTAIEKLDDTELGGRRIRV 866
>SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15)
Length = 876
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +2
Query: 71 IYVGGL-DDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKV 247
I++G L D++ L E+F + G V+ + H +GFV+F E+ AD A+
Sbjct: 48 IFIGNLATDKIARQDLEEIFSRHGKVLGCSL--------HANFGFVQFETEKGADEAVAK 99
Query: 248 MNMIKLYGKPVRV 286
+ + GK + V
Sbjct: 100 EHGRIINGKKIDV 112
>SB_34062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 552
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Frame = +2
Query: 332 VFIGNLDPEVDEKLLYDTFSAFG-VILQTPKVMRDPETGNSKAFAFINFASFEASDAAIE 508
VF+G L P++DE ++ +F FG + + P K +AF+ + + I
Sbjct: 346 VFVGGLPPDIDEDEIHASFCRFGSLTVDWPHKAESKSYFPPKGYAFLLYLEEISVQKLIS 405
Query: 509 AMNNQ----YLC 532
A Q YLC
Sbjct: 406 ACFRQDDKLYLC 417
>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
Length = 842
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 386 FSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEA 511
F FG + + VMRDP T S+ F F+ F +A D + +
Sbjct: 128 FEKFGELKECV-VMRDPVTKRSRGFGFLTFKDPKAVDVVLNS 168
>SB_40007| Best HMM Match : Arm (HMM E-Value=0.84)
Length = 274
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +2
Query: 293 ASAHQKNLDVGANVFIGNLDPEVDEKLLYDTF--SAFGVILQTPKVMR 430
A H KN + +NVF E K+L+D+ S F +L+T +R
Sbjct: 136 ADEHLKNAQIASNVFTNLAKHEAGLKVLFDSHLQSEFNALLKTKDTVR 183
>SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35)
Length = 1118
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
+Y+G L TE + F G + ++++ + YGFVEF + DAD A+
Sbjct: 5 VYLGRLPYGTTEDDVRRFFRSYGRLRDINLKNN--------YGFVEFEDDRDADDAVYEC 56
Query: 251 NMIKLYGKPVRV 286
N ++ G+ + V
Sbjct: 57 NGKEMLGERILV 68
>SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 188 QGYGFVEFMGEEDADYAIKVMNMIKLYGKPVRV 286
QG G VEF ++D A+K ++ + +GK +R+
Sbjct: 148 QGEGVVEFATKDDMKTALKKLDDTEFFGKRIRL 180
>SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33)
Length = 662
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 332 VFIGNLDPEVDEKLLYDTFSAFGVILQTP 418
VFIGNL V + + + FS +G IL+ P
Sbjct: 359 VFIGNLPSGVKDADVNEVFSKYGTILEIP 387
>SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11)
Length = 67
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 191 GYGFVEFMGEEDADYAIKVMNMIKLYGK 274
GYGFVEF +DA+ A+ N K+ G+
Sbjct: 39 GYGFVEFDYSDDAEDAVYECNGKKMLGE 66
>SB_44482| Best HMM Match : RRM_1 (HMM E-Value=0.19)
Length = 486
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +2
Query: 47 AERNQDATIYVGGLDDRVTESLLWELFVQSGPV--VNVH 157
A R + +YVG + D + +W F + GP+ V VH
Sbjct: 364 ASREERRIVYVGKISDETHKDDVWRRFRKYGPIEKVTVH 402
>SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 167 DRVTQTHQGYGFVEFMGEEDADYAIKVMNMIKLYGKPV 280
DR T+ + +G+V F E+DA A+K M GK +
Sbjct: 10 DRETRRSRNFGYVTFRDEQDAADAMKQMGGESGKGKEI 47
>SB_58665| Best HMM Match : TSP_1 (HMM E-Value=7.5e-10)
Length = 718
Score = 27.9 bits (59), Expect = 6.3
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +2
Query: 359 VDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYLCNR 538
++EK L T GV+ + MR T K ++ N +I+ M N +CN
Sbjct: 405 LEEKRLDLTSELLGVVGKDDMAMRHRYTCKVKGYSLQNMTLELTKTESIDCMYNAEICNL 464
Query: 539 P 541
P
Sbjct: 465 P 465
>SB_48256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 36
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/32 (34%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 137 GPVVNVHMPKDRV-TQTHQGYGFVEFMGEEDA 229
G + + +PK T H+G+ FV+F+ ++DA
Sbjct: 4 GEIKTLRLPKKMTGTGPHRGFAFVDFLTKQDA 35
>SB_58796| Best HMM Match : TIG (HMM E-Value=6.3e-22)
Length = 1709
Score = 27.5 bits (58), Expect = 8.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 100 YPVIETANVNRCILISFSNRPRCH 29
YP + T N N+ +LI +S+ CH
Sbjct: 93 YPRVPTDNRNKLLLIDYSSTTACH 116
>SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 781
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +2
Query: 125 FVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIK 244
F G + V + +D T+ ++GYG+V+F A A++
Sbjct: 73 FESFGDIEYVQIVRDHKTRENKGYGYVKFHKSSTAAMALE 112
>SB_7522| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 39
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 263 LYGKPVRVNKASAHQKNLDVGANVFIGNLDP 355
LYG + N A+ +Q NL++ AN+F DP
Sbjct: 7 LYGLTLASNVAAINQLNLNIIANIFQSLRDP 37
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,881,312
Number of Sequences: 59808
Number of extensions: 336060
Number of successful extensions: 884
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 863
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1373676929
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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