Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11l20f
(576 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 328 2e-90
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 328 2e-90
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 116 9e-27
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 116 9e-27
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 113 6e-26
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 113 6e-26
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 97 8e-21
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 81 6e-16
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 76 2e-14
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 74 6e-14
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 73 1e-13
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 71 4e-13
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 65 4e-11
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 65 4e-11
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 65 4e-11
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 64 7e-11
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 63 2e-10
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 63 2e-10
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 63 2e-10
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 62 2e-10
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 62 2e-10
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 62 3e-10
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 62 3e-10
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 60 1e-09
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 57 8e-09
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 57 8e-09
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 57 8e-09
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 57 1e-08
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 56 2e-08
AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical... 56 2e-08
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 55 4e-08
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 52 2e-07
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 52 2e-07
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 52 4e-07
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 48 4e-06
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 48 5e-06
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 48 5e-06
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 48 5e-06
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 48 5e-06
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 48 5e-06
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 48 5e-06
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 48 5e-06
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 48 5e-06
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 48 6e-06
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 47 8e-06
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 47 8e-06
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 46 1e-05
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 45 3e-05
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 45 3e-05
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 45 4e-05
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 44 6e-05
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 44 6e-05
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 44 1e-04
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 44 1e-04
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 43 1e-04
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 41 7e-04
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 41 7e-04
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 41 7e-04
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 41 7e-04
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 41 7e-04
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 41 7e-04
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 41 7e-04
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 41 7e-04
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 40 0.001
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 40 0.001
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 40 0.001
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 40 0.001
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 38 0.007
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 38 0.007
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 37 0.012
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 36 0.016
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 35 0.036
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 35 0.036
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 35 0.048
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 34 0.063
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 34 0.063
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 34 0.083
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 34 0.083
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 34 0.083
U55857-7|AAA98033.1| 217|Caenorhabditis elegans Rnp (rrm rna bi... 34 0.083
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 34 0.083
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 34 0.083
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 34 0.083
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 34 0.083
U80455-3|AAO38606.1| 145|Caenorhabditis elegans Elav-type rna b... 33 0.11
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 32 0.25
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 32 0.25
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 32 0.25
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 32 0.25
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 31 0.78
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 31 0.78
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 29 1.8
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 29 3.1
L14745-15|AAA27917.1| 85|Caenorhabditis elegans Hypothetical p... 28 4.1
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 28 5.5
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 28 5.5
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 28 5.5
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 28 5.5
AC024843-12|AAF60833.3| 986|Caenorhabditis elegans Hypothetical... 28 5.5
Z93385-8|CAN86626.1| 560|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z93385-7|CAN86625.1| 556|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z93385-6|CAB07641.1| 558|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical pr... 27 9.5
AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical ... 27 9.5
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 328 bits (806), Expect = 2e-90
Identities = 146/182 (80%), Positives = 171/182 (93%)
Frame = +2
Query: 26 KMAAGPIAERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFV 205
+M+AGPI ERNQDATIYVGGLD++V+ES+LWEL VQ+GPVV+V+MPKDRVT HQG+GFV
Sbjct: 10 EMSAGPIVERNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFV 69
Query: 206 EFMGEEDADYAIKVMNMIKLYGKPVRVNKASAHQKNLDVGANVFIGNLDPEVDEKLLYDT 385
EFMGEEDADYAIK++NMIKLYGKP++VNKASAH+KN+DVGAN+F+GNLDPEVDEKLLYDT
Sbjct: 70 EFMGEEDADYAIKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDT 129
Query: 386 FSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYLCNRPISVSYAFK 565
FSAFGVILQ PK+MRD ++G SK FAFINFASFEASD A+EAMN Q+LCNR I+VSYAFK
Sbjct: 130 FSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFK 189
Query: 566 KD 571
+D
Sbjct: 190 RD 191
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 328 bits (805), Expect = 2e-90
Identities = 146/181 (80%), Positives = 170/181 (93%)
Frame = +2
Query: 29 MAAGPIAERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVE 208
M+AGPI ERNQDATIYVGGLD++V+ES+LWEL VQ+GPVV+V+MPKDRVT HQG+GFVE
Sbjct: 1 MSAGPIVERNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVE 60
Query: 209 FMGEEDADYAIKVMNMIKLYGKPVRVNKASAHQKNLDVGANVFIGNLDPEVDEKLLYDTF 388
FMGEEDADYAIK++NMIKLYGKP++VNKASAH+KN+DVGAN+F+GNLDPEVDEKLLYDTF
Sbjct: 61 FMGEEDADYAIKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTF 120
Query: 389 SAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYLCNRPISVSYAFKK 568
SAFGVILQ PK+MRD ++G SK FAFINFASFEASD A+EAMN Q+LCNR I+VSYAFK+
Sbjct: 121 SAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFKR 180
Query: 569 D 571
D
Sbjct: 181 D 181
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 116 bits (280), Expect = 9e-27
Identities = 65/163 (39%), Positives = 95/163 (58%), Gaps = 1/163 (0%)
Frame = +2
Query: 65 ATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIK 244
A++YVG L V ES+L+E F +GPV+++ + +D T+ GY +V F DA+ A+
Sbjct: 32 ASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMD 91
Query: 245 VMNMIKLYGKPVRVNKASAHQKNLDVGA-NVFIGNLDPEVDEKLLYDTFSAFGVILQTPK 421
MN L+GKP+R+ + GA N+FI NLD +D K +YDTFS FG IL K
Sbjct: 92 TMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSC-K 150
Query: 422 VMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYLCNRPISV 550
V D E G SK + F++F + EA+ AI+ +N L + + V
Sbjct: 151 VAID-EDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFV 192
Score = 68.9 bits (161), Expect = 2e-12
Identities = 49/190 (25%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Frame = +2
Query: 59 QDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYA 238
Q +YV D + L ++F + G + + + V +G+GFV F E+A+ A
Sbjct: 211 QFTNVYVKNFGDHYNKETLEKVFAKFGNITSCEVMT--VEGKSKGFGFVAFANPEEAETA 268
Query: 239 IKVMNMIKLYGKPVRVNKASAHQKNLD-------------------VGANVFIGNLDPEV 361
++ ++ + G ++++ A +K+ G N+++ NLD V
Sbjct: 269 VQALHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETV 328
Query: 362 DEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYLCNRP 541
D+ L F ++G I KVM D E G SK F F+ F E + +A+ MN++ +C++P
Sbjct: 329 DDDGLKKQFESYGNITSA-KVMTD-ENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKP 386
Query: 542 ISVSYAFKKD 571
+ V+ +K+
Sbjct: 387 LYVAIGQRKE 396
Score = 66.9 bits (156), Expect = 1e-11
Identities = 49/167 (29%), Positives = 83/167 (49%), Gaps = 7/167 (4%)
Frame = +2
Query: 41 PIAERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGE 220
P R+ I++ LD + +++ F G +++ + D +GYGFV F E
Sbjct: 112 PAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFETE 170
Query: 221 EDADYAIKVMNMIKLYGKPVRVNKASAH-QKNLDVG------ANVFIGNLDPEVDEKLLY 379
E A AI+ +N + L GK V V K Q+N ++G NV++ N +++ L
Sbjct: 171 EAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLE 230
Query: 380 DTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNN 520
F+ FG I +VM G SK F F+ FA+ E ++ A++A+++
Sbjct: 231 KVFAKFGNITSC-EVM--TVEGKSKGFGFVAFANPEEAETAVQALHD 274
Score = 37.5 bits (83), Expect = 0.007
Identities = 23/79 (29%), Positives = 40/79 (50%)
Frame = +2
Query: 50 ERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDA 229
++ Q +YV LD+ V + L + F G + + + D ++ +G+GFV F E+A
Sbjct: 312 QKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRS-KGFGFVCFEKPEEA 370
Query: 230 DYAIKVMNMIKLYGKPVRV 286
A+ MN + KP+ V
Sbjct: 371 TSAVTEMNSKMVCSKPLYV 389
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 116 bits (280), Expect = 9e-27
Identities = 65/163 (39%), Positives = 95/163 (58%), Gaps = 1/163 (0%)
Frame = +2
Query: 65 ATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIK 244
A++YVG L V ES+L+E F +GPV+++ + +D T+ GY +V F DA+ A+
Sbjct: 32 ASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMD 91
Query: 245 VMNMIKLYGKPVRVNKASAHQKNLDVGA-NVFIGNLDPEVDEKLLYDTFSAFGVILQTPK 421
MN L+GKP+R+ + GA N+FI NLD +D K +YDTFS FG IL K
Sbjct: 92 TMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSC-K 150
Query: 422 VMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYLCNRPISV 550
V D E G SK + F++F + EA+ AI+ +N L + + V
Sbjct: 151 VAID-EDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFV 192
Score = 71.7 bits (168), Expect = 3e-13
Identities = 51/190 (26%), Positives = 92/190 (48%), Gaps = 19/190 (10%)
Frame = +2
Query: 59 QDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYA 238
Q +YV D + L +LF + G + + + V +G+GFV F E+A+ A
Sbjct: 211 QFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMT--VEGKSKGFGFVAFANPEEAETA 268
Query: 239 IKVMNMIKLYGKPVRVNKASAHQKNLD-------------------VGANVFIGNLDPEV 361
++ ++ + G ++++ A +K+ G N+++ NLD V
Sbjct: 269 VQALHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETV 328
Query: 362 DEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYLCNRP 541
D+ L F ++G I KVM D E G SK F F+ F E + +A+ MN++ +C++P
Sbjct: 329 DDDGLKKQFESYGNITSA-KVMTD-ENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKP 386
Query: 542 ISVSYAFKKD 571
+ V+ A +K+
Sbjct: 387 LYVAIAQRKE 396
Score = 66.5 bits (155), Expect = 1e-11
Identities = 49/167 (29%), Positives = 83/167 (49%), Gaps = 7/167 (4%)
Frame = +2
Query: 41 PIAERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGE 220
P R+ I++ LD + +++ F G +++ + D +GYGFV F E
Sbjct: 112 PAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFETE 170
Query: 221 EDADYAIKVMNMIKLYGKPVRVNKASAH-QKNLDVG------ANVFIGNLDPEVDEKLLY 379
E A AI+ +N + L GK V V K Q+N ++G NV++ N +++ L
Sbjct: 171 EAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLE 230
Query: 380 DTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNN 520
F+ FG I +VM G SK F F+ FA+ E ++ A++A+++
Sbjct: 231 KLFAKFGNITSC-EVM--TVEGKSKGFGFVAFANPEEAETAVQALHD 274
Score = 37.5 bits (83), Expect = 0.007
Identities = 23/79 (29%), Positives = 40/79 (50%)
Frame = +2
Query: 50 ERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDA 229
++ Q +YV LD+ V + L + F G + + + D ++ +G+GFV F E+A
Sbjct: 312 QKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRS-KGFGFVCFEKPEEA 370
Query: 230 DYAIKVMNMIKLYGKPVRV 286
A+ MN + KP+ V
Sbjct: 371 TSAVTEMNSKMVCSKPLYV 389
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 113 bits (273), Expect = 6e-26
Identities = 59/163 (36%), Positives = 96/163 (58%), Gaps = 1/163 (0%)
Frame = +2
Query: 65 ATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIK 244
A++Y+G L V+E++L+E F +GPV+++ + +D ++ GY +V F DA+ A+
Sbjct: 57 ASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALD 116
Query: 245 VMNMIKLYGKPVRVNKASAHQKNLDVG-ANVFIGNLDPEVDEKLLYDTFSAFGVILQTPK 421
MN ++G+P+R+ + G N+FI NLD +D K +YDTFS FG IL K
Sbjct: 117 TMNFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSC-K 175
Query: 422 VMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYLCNRPISV 550
V D E GNSK + F++F + ++ AIE +N L ++ + V
Sbjct: 176 VATDDE-GNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYV 217
Score = 71.3 bits (167), Expect = 4e-13
Identities = 56/185 (30%), Positives = 88/185 (47%), Gaps = 9/185 (4%)
Frame = +2
Query: 41 PIAERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGE 220
P A R + I++ LD + +++ F G +++ + D + +GYGFV F E
Sbjct: 137 PAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNS-KGYGFVHFETE 195
Query: 221 EDADYAIKVMNMIKLYGKPVRVNKASAH-QKNLDVG------ANVFIGNLDPEVDEKLLY 379
A AI+ +N + L K V V K Q+ ++G NVF+ N +D++ L
Sbjct: 196 HSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLS 255
Query: 380 DTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYL--CNRPISVS 553
FS FG I T V+ G K F F+ FA +A+ A+E +N+ L + +SV
Sbjct: 256 AMFSKFGEI--TSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLNDSILEGTDCKLSVC 313
Query: 554 YAFKK 568
A KK
Sbjct: 314 RAQKK 318
Score = 60.9 bits (141), Expect = 6e-10
Identities = 47/186 (25%), Positives = 91/186 (48%), Gaps = 19/186 (10%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
++V + + + L +F + G + + + D + +G+GFV F ++ A A++ +
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKP-KGFGFVAFADQDAAGQAVEKL 298
Query: 251 NMIKLYGKPVRVNKASAHQKNLDV-------------------GANVFIGNLDPEVDEKL 373
N L G +++ A +K+ G N+++ N++ ++++
Sbjct: 299 NDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDDG 358
Query: 374 LYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYLCNRPISVS 553
L D FS+FG I KVM D E G SK F F+ F E + AA+ MN++ + +P+ V+
Sbjct: 359 LRDHFSSFGTITSA-KVMVD-ENGRSKGFGFVCFEKPEEATAAVTDMNSKMIGAKPLYVA 416
Query: 554 YAFKKD 571
A +K+
Sbjct: 417 LAQRKE 422
Score = 52.0 bits (119), Expect = 3e-07
Identities = 24/78 (30%), Positives = 48/78 (61%)
Frame = +2
Query: 326 ANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAI 505
A+++IG+L P+V E +L++ FS G +L +V RD + S +A++NF ++ A+
Sbjct: 57 ASLYIGDLHPDVSEAMLFEKFSMAGPVLSI-RVCRDNTSRLSLGYAYVNFQQPADAERAL 115
Query: 506 EAMNNQYLCNRPISVSYA 559
+ MN + + RP+ + ++
Sbjct: 116 DTMNFEVIHGRPMRIMWS 133
Score = 34.7 bits (76), Expect = 0.048
Identities = 21/79 (26%), Positives = 40/79 (50%)
Frame = +2
Query: 50 ERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDA 229
+R Q +YV +++ + + L + F G + + + D ++ +G+GFV F E+A
Sbjct: 338 QRYQGVNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRS-KGFGFVCFEKPEEA 396
Query: 230 DYAIKVMNMIKLYGKPVRV 286
A+ MN + KP+ V
Sbjct: 397 TAAVTDMNSKMIGAKPLYV 415
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 113 bits (273), Expect = 6e-26
Identities = 59/163 (36%), Positives = 96/163 (58%), Gaps = 1/163 (0%)
Frame = +2
Query: 65 ATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIK 244
A++Y+G L V+E++L+E F +GPV+++ + +D ++ GY +V F DA+ A+
Sbjct: 57 ASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALD 116
Query: 245 VMNMIKLYGKPVRVNKASAHQKNLDVG-ANVFIGNLDPEVDEKLLYDTFSAFGVILQTPK 421
MN ++G+P+R+ + G N+FI NLD +D K +YDTFS FG IL K
Sbjct: 117 TMNFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSC-K 175
Query: 422 VMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYLCNRPISV 550
V D E GNSK + F++F + ++ AIE +N L ++ + V
Sbjct: 176 VATDDE-GNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYV 217
Score = 71.3 bits (167), Expect = 4e-13
Identities = 56/185 (30%), Positives = 88/185 (47%), Gaps = 9/185 (4%)
Frame = +2
Query: 41 PIAERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGE 220
P A R + I++ LD + +++ F G +++ + D + +GYGFV F E
Sbjct: 137 PAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNS-KGYGFVHFETE 195
Query: 221 EDADYAIKVMNMIKLYGKPVRVNKASAH-QKNLDVG------ANVFIGNLDPEVDEKLLY 379
A AI+ +N + L K V V K Q+ ++G NVF+ N +D++ L
Sbjct: 196 HSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLS 255
Query: 380 DTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYL--CNRPISVS 553
FS FG I T V+ G K F F+ FA +A+ A+E +N+ L + +SV
Sbjct: 256 AMFSKFGEI--TSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLNDSILEGTDCKLSVC 313
Query: 554 YAFKK 568
A KK
Sbjct: 314 RAQKK 318
Score = 60.9 bits (141), Expect = 6e-10
Identities = 47/186 (25%), Positives = 91/186 (48%), Gaps = 19/186 (10%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
++V + + + L +F + G + + + D + +G+GFV F ++ A A++ +
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKP-KGFGFVAFADQDAAGQAVEKL 298
Query: 251 NMIKLYGKPVRVNKASAHQKNLDV-------------------GANVFIGNLDPEVDEKL 373
N L G +++ A +K+ G N+++ N++ ++++
Sbjct: 299 NDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDDG 358
Query: 374 LYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYLCNRPISVS 553
L D FS+FG I KVM D E G SK F F+ F E + AA+ MN++ + +P+ V+
Sbjct: 359 LRDHFSSFGTITSA-KVMVD-ENGRSKGFGFVCFEKPEEATAAVTDMNSKMIGAKPLYVA 416
Query: 554 YAFKKD 571
A +K+
Sbjct: 417 LAQRKE 422
Score = 52.0 bits (119), Expect = 3e-07
Identities = 24/78 (30%), Positives = 48/78 (61%)
Frame = +2
Query: 326 ANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAI 505
A+++IG+L P+V E +L++ FS G +L +V RD + S +A++NF ++ A+
Sbjct: 57 ASLYIGDLHPDVSEAMLFEKFSMAGPVLSI-RVCRDNTSRLSLGYAYVNFQQPADAERAL 115
Query: 506 EAMNNQYLCNRPISVSYA 559
+ MN + + RP+ + ++
Sbjct: 116 DTMNFEVIHGRPMRIMWS 133
Score = 34.7 bits (76), Expect = 0.048
Identities = 21/79 (26%), Positives = 40/79 (50%)
Frame = +2
Query: 50 ERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDA 229
+R Q +YV +++ + + L + F G + + + D ++ +G+GFV F E+A
Sbjct: 338 QRYQGVNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRS-KGFGFVCFEKPEEA 396
Query: 230 DYAIKVMNMIKLYGKPVRV 286
A+ MN + KP+ V
Sbjct: 397 TAAVTDMNSKMIGAKPLYV 415
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 97.1 bits (231), Expect = 8e-21
Identities = 61/176 (34%), Positives = 91/176 (51%), Gaps = 5/176 (2%)
Frame = +2
Query: 56 NQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADY 235
++ T+YVG LD VTE + LF Q G V + D ++ Y FVEF A
Sbjct: 43 DEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDG---SNDPYAFVEFSDHGQASQ 99
Query: 236 AIKVMNMIKLYGKPVRVNKA---SAHQKNLDVGAN--VFIGNLDPEVDEKLLYDTFSAFG 400
A++ MN L + ++VN A Q +D + VF+G+L EVD + L + F FG
Sbjct: 100 ALQTMNKRLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFG 159
Query: 401 VILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYLCNRPISVSYAFKK 568
+ KV+RD T SK + F+++ E ++ AIE MN Q+L R I ++A +K
Sbjct: 160 DVSDA-KVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 214
Score = 50.4 bits (115), Expect = 9e-07
Identities = 46/170 (27%), Positives = 80/170 (47%), Gaps = 19/170 (11%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
++VG L V L E F G V + + +D T +GYGFV + E+A+ AI+ M
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 196
Query: 251 NMIKLYGKPVRVNKASA-----------HQKNLDV--------GANVFIGNLDPEVDEKL 373
N L + +R N A+ ++K+ D +V++GN+ + E
Sbjct: 197 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNI-ASLTEDE 255
Query: 374 LYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQ 523
+ F++FG I + ++ + + +AF+ F + +A+ AI MNNQ
Sbjct: 256 IRQGFASFGRITEV-RIFK------MQGYAFVKFDNKDAAAKAIVQMNNQ 298
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 81.0 bits (191), Expect = 6e-16
Identities = 49/184 (26%), Positives = 91/184 (49%), Gaps = 3/184 (1%)
Frame = +2
Query: 17 SFEKMAAGPIAERNQDAT-IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQG 193
S ++ + P + + T + + L +T+ + LF G + + + +D+VT G
Sbjct: 25 STQRYCSAPNVDIGESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLG 84
Query: 194 YGFVEFMGEEDADYAIKVMNMIKLYGKPVRVNKASAHQKNLDVGANVFIGNLDPEVDEKL 373
YGFV ++ EEDA A+ N ++L K ++V+ A + G+N+++ + +
Sbjct: 85 YGFVNYVREEDALRAVSSFNGLRLQNKTIKVSYARPSNDQIK-GSNLYVSGIPKSMTLHE 143
Query: 374 LYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYL--CNRPIS 547
L F FG I+ T +++ D TG SK F+ F + +D AI+ +N C+ I+
Sbjct: 144 LESIFRPFGQII-TSRILSDNVTGLSKGVGFVRFDKKDEADVAIKTLNGSIPSGCSEQIT 202
Query: 548 VSYA 559
V +A
Sbjct: 203 VKFA 206
Score = 48.0 bits (109), Expect = 5e-06
Identities = 26/72 (36%), Positives = 41/72 (56%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
++V L ++LLW+LF Q G +VNV + +D +TQ +GY FV +A A+ +
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRD-LTQQCKGYAFVSMSNYTEAYNAMLSL 434
Query: 251 NMIKLYGKPVRV 286
N L GK ++V
Sbjct: 435 NGTNLAGKTLQV 446
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/80 (30%), Positives = 42/80 (52%)
Frame = +2
Query: 14 KSFEKMAAGPIAERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQG 193
K+ + A P ++ + + +YV G+ +T L +F G ++ + D VT +G
Sbjct: 111 KTIKVSYARPSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKG 170
Query: 194 YGFVEFMGEEDADYAIKVMN 253
GFV F +++AD AIK +N
Sbjct: 171 VGFVRFDKKDEADVAIKTLN 190
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 75.8 bits (178), Expect = 2e-14
Identities = 45/110 (40%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
Frame = +2
Query: 224 DADYAIKVMNMIKLYGKPVRVNKASAHQKNLDVGA-NVFIGNLDPEVDEKLLYDTFSAFG 400
DA+ A+ MN L+GKP+R+ + GA N+FI NLD +D K +YDTFS FG
Sbjct: 22 DAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFG 81
Query: 401 VILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYLCNRPISV 550
IL KV D E G SK + F++F + EA+ AI+ +N L + + V
Sbjct: 82 NILSC-KVAID-EDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFV 129
Score = 71.7 bits (168), Expect = 3e-13
Identities = 51/190 (26%), Positives = 92/190 (48%), Gaps = 19/190 (10%)
Frame = +2
Query: 59 QDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYA 238
Q +YV D + L +LF + G + + + V +G+GFV F E+A+ A
Sbjct: 148 QFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMT--VEGKSKGFGFVAFANPEEAETA 205
Query: 239 IKVMNMIKLYGKPVRVNKASAHQKNLD-------------------VGANVFIGNLDPEV 361
++ ++ + G ++++ A +K+ G N+++ NLD V
Sbjct: 206 VQALHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETV 265
Query: 362 DEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYLCNRP 541
D+ L F ++G I KVM D E G SK F F+ F E + +A+ MN++ +C++P
Sbjct: 266 DDDGLKKQFESYGNITSA-KVMTD-ENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKP 323
Query: 542 ISVSYAFKKD 571
+ V+ A +K+
Sbjct: 324 LYVAIAQRKE 333
Score = 66.5 bits (155), Expect = 1e-11
Identities = 49/167 (29%), Positives = 83/167 (49%), Gaps = 7/167 (4%)
Frame = +2
Query: 41 PIAERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGE 220
P R+ I++ LD + +++ F G +++ + D +GYGFV F E
Sbjct: 49 PAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFETE 107
Query: 221 EDADYAIKVMNMIKLYGKPVRVNKASAH-QKNLDVG------ANVFIGNLDPEVDEKLLY 379
E A AI+ +N + L GK V V K Q+N ++G NV++ N +++ L
Sbjct: 108 EAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLE 167
Query: 380 DTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNN 520
F+ FG I +VM G SK F F+ FA+ E ++ A++A+++
Sbjct: 168 KLFAKFGNITSC-EVM--TVEGKSKGFGFVAFANPEEAETAVQALHD 211
Score = 37.5 bits (83), Expect = 0.007
Identities = 23/79 (29%), Positives = 40/79 (50%)
Frame = +2
Query: 50 ERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDA 229
++ Q +YV LD+ V + L + F G + + + D ++ +G+GFV F E+A
Sbjct: 249 QKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRS-KGFGFVCFEKPEEA 307
Query: 230 DYAIKVMNMIKLYGKPVRV 286
A+ MN + KP+ V
Sbjct: 308 TSAVTEMNSKMVCSKPLYV 326
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 74.1 bits (174), Expect = 6e-14
Identities = 37/80 (46%), Positives = 50/80 (62%)
Frame = +2
Query: 56 NQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADY 235
N+ T+YVGG + VTE +L F+ G VV + +P D + H+G+GFVEF EDA
Sbjct: 8 NRKRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAM 67
Query: 236 AIKVMNMIKLYGKPVRVNKA 295
AI MN +L+GK +RVN A
Sbjct: 68 AIDNMNESELFGKTIRVNFA 87
Score = 44.0 bits (99), Expect = 8e-05
Identities = 23/76 (30%), Positives = 39/76 (51%)
Frame = +2
Query: 332 VFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEA 511
+++G +V EK+L F FG ++ + D E+G + F F+ F E + AI+
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAI-SIPMDYESGKHRGFGFVEFDMAEDAAMAIDN 71
Query: 512 MNNQYLCNRPISVSYA 559
MN L + I V++A
Sbjct: 72 MNESELFGKTIRVNFA 87
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 73.3 bits (172), Expect = 1e-13
Identities = 38/97 (39%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Frame = +2
Query: 65 ATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIK 244
A++YVG L V ES+L+E F +GPV+++ + +D T+ GY +V F DA+ A+
Sbjct: 32 ASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMD 91
Query: 245 VMNMIKLYGKPVRVNKASAHQKNLDVGA-NVFIGNLD 352
MN L+GKP+R+ + GA N+FI NLD
Sbjct: 92 TMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLD 128
Score = 72.9 bits (171), Expect = 1e-13
Identities = 57/217 (26%), Positives = 105/217 (48%), Gaps = 30/217 (13%)
Frame = +2
Query: 11 VKSFEKMAAG---PIAERNQD--------ATIYVGGLDDRVTESLLWELFVQSGPVVNVH 157
+K+ +K+ G P A+RN++ +YV D + L +LF + G + +
Sbjct: 124 IKNLDKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCE 183
Query: 158 MPKDRVTQTHQGYGFVEFMGEEDADYAIKVMNMIKLYGKPVRVNKASAHQKNLD------ 319
+ V +G+GFV F E+A+ A++ ++ + G ++++ A +K+
Sbjct: 184 VMT--VEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQKKSERHAELKK 241
Query: 320 -------------VGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAF 460
G N+++ NLD VD+ L F ++G I KVM D E G SK F
Sbjct: 242 KHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSA-KVMTD-ENGRSKGF 299
Query: 461 AFINFASFEASDAAIEAMNNQYLCNRPISVSYAFKKD 571
F+ F E + +A+ MN++ +C++P+ V+ A +K+
Sbjct: 300 GFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQRKE 336
Score = 54.8 bits (126), Expect = 4e-08
Identities = 25/78 (32%), Positives = 50/78 (64%)
Frame = +2
Query: 326 ANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAI 505
A++++G+L P+V+E +L++ FSA G +L +V RD T S +A++NF ++ A+
Sbjct: 32 ASLYVGDLHPDVNESILFEKFSAAGPVLSI-RVCRDNATRLSLGYAYVNFQQPADAERAM 90
Query: 506 EAMNNQYLCNRPISVSYA 559
+ MN + L +P+ + ++
Sbjct: 91 DTMNFEALHGKPMRIMWS 108
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 71.3 bits (167), Expect = 4e-13
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 9/184 (4%)
Frame = +2
Query: 44 IAERNQDA-TIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGE 220
+A ++D T++V LD +T+ L LF Q G V+ + + + Y FVEF
Sbjct: 32 LASGSEDPRTLFVANLDPAITDEFLATLFNQIGAVMKAKIIFEGLNDP---YAFVEFSDH 88
Query: 221 EDADYAIKVMNMIKLYGKPVRVNKA--------SAHQKNLDVGANVFIGNLDPEVDEKLL 376
A A++ N +L K + V A + + +VF+G+L E+D L
Sbjct: 89 NQATLALQSHNGRELLEKEMHVTWAFEPREPGENRSKPETSRHFHVFVGDLCSEIDSTKL 148
Query: 377 YDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYLCNRPISVSY 556
+ F FG + + K++RD T K + F+++ E ++ AI+ MN +L R I ++
Sbjct: 149 REAFVKFGEVSEA-KIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNGAWLGRRTIRTNW 207
Query: 557 AFKK 568
A +K
Sbjct: 208 ATRK 211
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 64.9 bits (151), Expect = 4e-11
Identities = 38/150 (25%), Positives = 75/150 (50%), Gaps = 5/150 (3%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
I+VGGL T+ L+ E + Q G + ++ + +D T+ +G+GFV F G+ + D A+K
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQR 84
Query: 251 NMIKLYGKPVRVNKASAHQKNLDVGANV-----FIGNLDPEVDEKLLYDTFSAFGVILQT 415
I + GK V +A +NV ++ + + E +L + F+ +G + ++
Sbjct: 85 PHI-IDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKS 143
Query: 416 PKVMRDPETGNSKAFAFINFASFEASDAAI 505
+++ D T + F F+ F ++ D +
Sbjct: 144 -EIILDKATQKPRGFGFVTFDDHDSVDQCV 172
Score = 42.3 bits (95), Expect = 2e-04
Identities = 25/72 (34%), Positives = 37/72 (51%)
Frame = +2
Query: 293 ASAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFIN 472
AS +NL +F+G L + L+ + +S FG I VMRDP T S+ F F+
Sbjct: 15 ASLEPENL---RKIFVGGLTSNTTDDLMREFYSQFGEITDII-VMRDPTTKRSRGFGFVT 70
Query: 473 FASFEASDAAIE 508
F+ DAA++
Sbjct: 71 FSGKTEVDAAMK 82
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 64.9 bits (151), Expect = 4e-11
Identities = 38/150 (25%), Positives = 75/150 (50%), Gaps = 5/150 (3%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
I+VGGL T+ L+ E + Q G + ++ + +D T+ +G+GFV F G+ + D A+K
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQR 84
Query: 251 NMIKLYGKPVRVNKASAHQKNLDVGANV-----FIGNLDPEVDEKLLYDTFSAFGVILQT 415
I + GK V +A +NV ++ + + E +L + F+ +G + ++
Sbjct: 85 PHI-IDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKS 143
Query: 416 PKVMRDPETGNSKAFAFINFASFEASDAAI 505
+++ D T + F F+ F ++ D +
Sbjct: 144 -EIILDKATQKPRGFGFVTFDDHDSVDQCV 172
Score = 42.3 bits (95), Expect = 2e-04
Identities = 25/72 (34%), Positives = 37/72 (51%)
Frame = +2
Query: 293 ASAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFIN 472
AS +NL +F+G L + L+ + +S FG I VMRDP T S+ F F+
Sbjct: 15 ASLEPENL---RKIFVGGLTSNTTDDLMREFYSQFGEITDII-VMRDPTTKRSRGFGFVT 70
Query: 473 FASFEASDAAIE 508
F+ DAA++
Sbjct: 71 FSGKTEVDAAMK 82
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 64.9 bits (151), Expect = 4e-11
Identities = 38/150 (25%), Positives = 75/150 (50%), Gaps = 5/150 (3%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
I+VGGL T+ L+ E + Q G + ++ + +D T+ +G+GFV F G+ + D A+K
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQR 84
Query: 251 NMIKLYGKPVRVNKASAHQKNLDVGANV-----FIGNLDPEVDEKLLYDTFSAFGVILQT 415
I + GK V +A +NV ++ + + E +L + F+ +G + ++
Sbjct: 85 PHI-IDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKS 143
Query: 416 PKVMRDPETGNSKAFAFINFASFEASDAAI 505
+++ D T + F F+ F ++ D +
Sbjct: 144 -EIILDKATQKPRGFGFVTFDDHDSVDQCV 172
Score = 42.3 bits (95), Expect = 2e-04
Identities = 25/72 (34%), Positives = 37/72 (51%)
Frame = +2
Query: 293 ASAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFIN 472
AS +NL +F+G L + L+ + +S FG I VMRDP T S+ F F+
Sbjct: 15 ASLEPENL---RKIFVGGLTSNTTDDLMREFYSQFGEITDII-VMRDPTTKRSRGFGFVT 70
Query: 473 FASFEASDAAIE 508
F+ DAA++
Sbjct: 71 FSGKTEVDAAMK 82
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 64.1 bits (149), Expect = 7e-11
Identities = 39/112 (34%), Positives = 60/112 (53%), Gaps = 5/112 (4%)
Frame = +2
Query: 248 MNMIKLYGKPVRVNKA---SAHQKNLDVGAN--VFIGNLDPEVDEKLLYDTFSAFGVILQ 412
MN L + ++VN A Q +D + VF+G+L EVD + L + F FG +
Sbjct: 1 MNKRLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSD 60
Query: 413 TPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYLCNRPISVSYAFKK 568
KV+RD T SK + F+++ E ++ AIE MN Q+L R I ++A +K
Sbjct: 61 A-KVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 111
Score = 50.4 bits (115), Expect = 9e-07
Identities = 46/170 (27%), Positives = 80/170 (47%), Gaps = 19/170 (11%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
++VG L V L E F G V + + +D T +GYGFV + E+A+ AI+ M
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 93
Query: 251 NMIKLYGKPVRVNKASA-----------HQKNLDV--------GANVFIGNLDPEVDEKL 373
N L + +R N A+ ++K+ D +V++GN+ + E
Sbjct: 94 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNI-ASLTEDE 152
Query: 374 LYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQ 523
+ F++FG I + ++ + + +AF+ F + +A+ AI MNNQ
Sbjct: 153 IRQGFASFGRITEV-RIFK------MQGYAFVKFDNKDAAAKAIVQMNNQ 195
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 62.9 bits (146), Expect = 2e-10
Identities = 38/123 (30%), Positives = 63/123 (51%)
Frame = +2
Query: 200 FVEFMGEEDADYAIKVMNMIKLYGKPVRVNKASAHQKNLDVGANVFIGNLDPEVDEKLLY 379
+V+F EE + A+K N KL +RV+K + +K +F+GNL E+ E L
Sbjct: 205 YVKFGAEESVEKALKY-NGTKLDDHVIRVDKVGSKKKEFGKDMAIFVGNLPFEITEDALI 263
Query: 380 DTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYLCNRPISVSYA 559
FSA ++ +++RD +TG K FAF+NF + A+ +M + R + ++
Sbjct: 264 TFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVSLAL-SMETIKMEKRDLRITKV 322
Query: 560 FKK 568
KK
Sbjct: 323 MKK 325
Score = 45.6 bits (103), Expect = 3e-05
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +2
Query: 50 ERNQDATIYVGGLDDRVTESLLWELF-VQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEED 226
E +D I+VG L +TE L F Q GPV V + +D+ T +G+ FV F +
Sbjct: 241 EFGKDMAIFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSS 300
Query: 227 ADYAIKVMNMIKLYGKPVRVNK 292
A+ M IK+ + +R+ K
Sbjct: 301 VSLALS-METIKMEKRDLRITK 321
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 284 VNKASAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVI 406
+ K++A + VF+GN+ ++EK + FS FG I
Sbjct: 129 LQKSNARASAAENALTVFVGNMPLTMNEKSVRRIFSDFGTI 169
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 62.9 bits (146), Expect = 2e-10
Identities = 31/80 (38%), Positives = 48/80 (60%)
Frame = +2
Query: 329 NVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIE 508
+VF+G+L EVD + L + F FG + KV+RD T SK + F+++ E ++ AIE
Sbjct: 23 HVFVGDLSSEVDNQKLREAFQPFGDVSDA-KVIRDTNTTKSKGYGFVSYPKREEAERAIE 81
Query: 509 AMNNQYLCNRPISVSYAFKK 568
MN Q+L R I ++A +K
Sbjct: 82 QMNGQWLGRRTIRTNWATRK 101
Score = 50.4 bits (115), Expect = 9e-07
Identities = 46/170 (27%), Positives = 80/170 (47%), Gaps = 19/170 (11%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
++VG L V L E F G V + + +D T +GYGFV + E+A+ AI+ M
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 83
Query: 251 NMIKLYGKPVRVNKASA-----------HQKNLDV--------GANVFIGNLDPEVDEKL 373
N L + +R N A+ ++K+ D +V++GN+ + E
Sbjct: 84 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNI-ASLTEDE 142
Query: 374 LYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQ 523
+ F++FG I + ++ + + +AF+ F + +A+ AI MNNQ
Sbjct: 143 IRQGFASFGRITEV-RIFK------MQGYAFVKFDNKDAAAKAIVQMNNQ 185
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 62.9 bits (146), Expect = 2e-10
Identities = 31/80 (38%), Positives = 48/80 (60%)
Frame = +2
Query: 329 NVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIE 508
+VF+G+L EVD + L + F FG + KV+RD T SK + F+++ E ++ AIE
Sbjct: 104 HVFVGDLSSEVDNQKLREAFQPFGDVSDA-KVIRDTNTTKSKGYGFVSYPKREEAERAIE 162
Query: 509 AMNNQYLCNRPISVSYAFKK 568
MN Q+L R I ++A +K
Sbjct: 163 QMNGQWLGRRTIRTNWATRK 182
Score = 50.4 bits (115), Expect = 9e-07
Identities = 46/170 (27%), Positives = 80/170 (47%), Gaps = 19/170 (11%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
++VG L V L E F G V + + +D T +GYGFV + E+A+ AI+ M
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 164
Query: 251 NMIKLYGKPVRVNKASA-----------HQKNLDV--------GANVFIGNLDPEVDEKL 373
N L + +R N A+ ++K+ D +V++GN+ + E
Sbjct: 165 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNI-ASLTEDE 223
Query: 374 LYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQ 523
+ F++FG I + ++ + + +AF+ F + +A+ AI MNNQ
Sbjct: 224 IRQGFASFGRITEV-RIFK------MQGYAFVKFDNKDAAAKAIVQMNNQ 266
Score = 30.7 bits (66), Expect = 0.78
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 56 NQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRV 175
++ T+YVG LD VTE + LF Q G V + D +
Sbjct: 43 DEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDEM 82
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 62.5 bits (145), Expect = 2e-10
Identities = 46/155 (29%), Positives = 66/155 (42%)
Frame = +2
Query: 38 GPIAERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMG 217
G + N+D I+VGG+ V L F Q G V + DR +G+ FVEF
Sbjct: 20 GHSTKGNEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTT 79
Query: 218 EEDADYAIKVMNMIKLYGKPVRVNKASAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAF 397
E A+ + GK V V A + + VF+G L + E+ L F F
Sbjct: 80 GEGCKLALAAREQ-TIKGKSVEVKPAKSRENK-----KVFVGGLPSDYSEQDLRSHFEQF 133
Query: 398 GVILQTPKVMRDPETGNSKAFAFINFASFEASDAA 502
G + + D +T + FAFI F E++D A
Sbjct: 134 GKV-DDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
Score = 46.4 bits (105), Expect = 1e-05
Identities = 27/104 (25%), Positives = 48/104 (46%)
Frame = +2
Query: 260 KLYGKPVRVNKASAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPE 439
K+ G K + H + +F+G + PEV+ + L F+ +G + Q +V D
Sbjct: 7 KINGNASETIKENGHSTKGNEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQA-QVKYDRT 65
Query: 440 TGNSKAFAFINFASFEASDAAIEAMNNQYLCNRPISVSYAFKKD 571
G S+ FAF+ F + E A+ A Q + + + V A ++
Sbjct: 66 NGRSRGFAFVEFTTGEGCKLAL-AAREQTIKGKSVEVKPAKSRE 108
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 62.5 bits (145), Expect = 2e-10
Identities = 46/155 (29%), Positives = 66/155 (42%)
Frame = +2
Query: 38 GPIAERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMG 217
G + N+D I+VGG+ V L F Q G V + DR +G+ FVEF
Sbjct: 20 GHSTKGNEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTT 79
Query: 218 EEDADYAIKVMNMIKLYGKPVRVNKASAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAF 397
E A+ + GK V V A + + VF+G L + E+ L F F
Sbjct: 80 GEGCKLALAAREQ-TIKGKSVEVKPAKSRENK-----KVFVGGLPSDYSEQDLRSHFEQF 133
Query: 398 GVILQTPKVMRDPETGNSKAFAFINFASFEASDAA 502
G + + D +T + FAFI F E++D A
Sbjct: 134 GKV-DDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
Score = 46.4 bits (105), Expect = 1e-05
Identities = 27/104 (25%), Positives = 48/104 (46%)
Frame = +2
Query: 260 KLYGKPVRVNKASAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPE 439
K+ G K + H + +F+G + PEV+ + L F+ +G + Q +V D
Sbjct: 7 KINGNASETIKENGHSTKGNEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQA-QVKYDRT 65
Query: 440 TGNSKAFAFINFASFEASDAAIEAMNNQYLCNRPISVSYAFKKD 571
G S+ FAF+ F + E A+ A Q + + + V A ++
Sbjct: 66 NGRSRGFAFVEFTTGEGCKLAL-AAREQTIKGKSVEVKPAKSRE 108
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 62.1 bits (144), Expect = 3e-10
Identities = 40/149 (26%), Positives = 72/149 (48%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
+Y+ GL + LL E+ + G + + D+ T +GYGFV+F + A A+ +
Sbjct: 109 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVDGL 168
Query: 251 NMIKLYGKPVRVNKASAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMR 430
N + V+ A Q+ D N++I NL + E++L + FG+++ T +++R
Sbjct: 169 NT-----EGVQAQMAKLQQQEQD-PTNLYIANLPLDFTEQMLETELNKFGMVIST-RILR 221
Query: 431 DPETGNSKAFAFINFASFEASDAAIEAMN 517
P+ S+ F S E + I A+N
Sbjct: 222 TPD-NQSRGVGFARMDSKEKCEVIISALN 249
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 62.1 bits (144), Expect = 3e-10
Identities = 40/149 (26%), Positives = 72/149 (48%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
+Y+ GL + LL E+ + G + + D+ T +GYGFV+F + A A+ +
Sbjct: 83 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVDGL 142
Query: 251 NMIKLYGKPVRVNKASAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMR 430
N + V+ A Q+ D N++I NL + E++L + FG+++ T +++R
Sbjct: 143 NT-----EGVQAQMAKLQQQEQD-PTNLYIANLPLDFTEQMLETELNKFGMVIST-RILR 195
Query: 431 DPETGNSKAFAFINFASFEASDAAIEAMN 517
P+ S+ F S E + I A+N
Sbjct: 196 TPD-NQSRGVGFARMDSKEKCEVIISALN 223
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 60.1 bits (139), Expect = 1e-09
Identities = 27/81 (33%), Positives = 52/81 (64%)
Frame = +2
Query: 329 NVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIE 508
+VF+G+L +V +LL TF+ FG + + KV+RD +T SK + F++F + + ++ AI
Sbjct: 136 HVFVGDLSKDVSNELLKSTFTKFGEVSEA-KVIRDVQTQKSKGYGFVSFPNKQNAENAIA 194
Query: 509 AMNNQYLCNRPISVSYAFKKD 571
MN +++ R + ++A +K+
Sbjct: 195 GMNGKWIGKRAVRTNWAARKN 215
Score = 59.3 bits (137), Expect = 2e-09
Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 15/177 (8%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
++VG L V+ LL F + G V + +D TQ +GYGFV F +++A+ AI M
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGM 196
Query: 251 NMIKLYGKPVRVNKASA--HQKNLDV-------------GANVFIGNLDPEVDEKLLYDT 385
N + + VR N A+ ++N D +V++GN+ + + L D
Sbjct: 197 NGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTDADLRDL 256
Query: 386 FSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYLCNRPISVSY 556
FS +G I + ++ + ++ +AF+ + E + AI MN + + + S+
Sbjct: 257 FSTYGDIAEV-RIFK------TQRYAFVRYEKKECATKAIMEMNGKEMAGNQVRCSW 306
Score = 35.9 bits (79), Expect = 0.021
Identities = 24/74 (32%), Positives = 39/74 (52%)
Frame = +2
Query: 62 DATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAI 241
+ ++YVG + + T++ L +LF G + V R+ +T Q Y FV + +E A AI
Sbjct: 236 NTSVYVGNISQQTTDADLRDLFSTYGDIAEV-----RIFKT-QRYAFVRYEKKECATKAI 289
Query: 242 KVMNMIKLYGKPVR 283
MN ++ G VR
Sbjct: 290 MEMNGKEMAGNQVR 303
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 57.2 bits (132), Expect = 8e-09
Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 18/167 (10%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
IYVG + + E +L F GP+ +++M D T H+ + FVE+ E A A + M
Sbjct: 104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESM 163
Query: 251 NMIKLYGKPVRVNKASAH------------------QKNLDVGANVFIGNLDPEVDEKLL 376
N L G+ ++VN QK+ V++ ++ P++ E L
Sbjct: 164 NGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETDL 223
Query: 377 YDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMN 517
F AFG I++ ++ R P + F ++ F + + AI MN
Sbjct: 224 KSVFEAFGEIVKC-QLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMN 269
Score = 51.6 bits (118), Expect = 4e-07
Identities = 30/108 (27%), Positives = 57/108 (52%)
Frame = +2
Query: 230 DYAIKVMNMIKLYGKPVRVNKASAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVIL 409
D +IK + + + + + + + L + + +++G++ E+ E +L F FG I
Sbjct: 70 DISIKQILLRQQKQQQENQQRQQMYSQALSIMSRIYVGSISFEIREDMLRRAFDPFGPI- 128
Query: 410 QTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYLCNRPISVS 553
++ + DP TG+ K FAF+ + EA+ A E+MN Q L R + V+
Sbjct: 129 KSINMSWDPATGHHKTFAFVEYEVPEAALLAQESMNGQMLGGRNLKVN 176
Score = 38.3 bits (85), Expect = 0.004
Identities = 20/71 (28%), Positives = 36/71 (50%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
+YV + ++E+ L +F G +V + + + H+G+G++EF AI M
Sbjct: 209 VYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGM 268
Query: 251 NMIKLYGKPVR 283
NM L G+ +R
Sbjct: 269 NMFDLGGQYLR 279
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 57.2 bits (132), Expect = 8e-09
Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 18/167 (10%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
IYVG + + E +L F GP+ +++M D T H+ + FVE+ E A A + M
Sbjct: 104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESM 163
Query: 251 NMIKLYGKPVRVNKASAH------------------QKNLDVGANVFIGNLDPEVDEKLL 376
N L G+ ++VN QK+ V++ ++ P++ E L
Sbjct: 164 NGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETDL 223
Query: 377 YDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMN 517
F AFG I++ ++ R P + F ++ F + + AI MN
Sbjct: 224 KSVFEAFGEIVKC-QLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMN 269
Score = 51.6 bits (118), Expect = 4e-07
Identities = 30/108 (27%), Positives = 57/108 (52%)
Frame = +2
Query: 230 DYAIKVMNMIKLYGKPVRVNKASAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVIL 409
D +IK + + + + + + + L + + +++G++ E+ E +L F FG I
Sbjct: 70 DISIKQILLRQQKQQQENQQRQQMYSQALSIMSRIYVGSISFEIREDMLRRAFDPFGPI- 128
Query: 410 QTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYLCNRPISVS 553
++ + DP TG+ K FAF+ + EA+ A E+MN Q L R + V+
Sbjct: 129 KSINMSWDPATGHHKTFAFVEYEVPEAALLAQESMNGQMLGGRNLKVN 176
Score = 41.9 bits (94), Expect = 3e-04
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
+YV + ++E+ L +F G +V + + + H+G+G++EF AI M
Sbjct: 209 VYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGM 268
Query: 251 NMIKLYGKPVRVNK 292
NM L G+ +RV K
Sbjct: 269 NMFDLGGQYLRVGK 282
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 57.2 bits (132), Expect = 8e-09
Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 18/167 (10%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
IYVG + + E +L F GP+ +++M D T H+ + FVE+ E A A + M
Sbjct: 104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESM 163
Query: 251 NMIKLYGKPVRVNKASAH------------------QKNLDVGANVFIGNLDPEVDEKLL 376
N L G+ ++VN QK+ V++ ++ P++ E L
Sbjct: 164 NGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETDL 223
Query: 377 YDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMN 517
F AFG I++ ++ R P + F ++ F + + AI MN
Sbjct: 224 KSVFEAFGEIVKC-QLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMN 269
Score = 51.6 bits (118), Expect = 4e-07
Identities = 30/108 (27%), Positives = 57/108 (52%)
Frame = +2
Query: 230 DYAIKVMNMIKLYGKPVRVNKASAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVIL 409
D +IK + + + + + + + L + + +++G++ E+ E +L F FG I
Sbjct: 70 DISIKQILLRQQKQQQENQQRQQMYSQALSIMSRIYVGSISFEIREDMLRRAFDPFGPI- 128
Query: 410 QTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYLCNRPISVS 553
++ + DP TG+ K FAF+ + EA+ A E+MN Q L R + V+
Sbjct: 129 KSINMSWDPATGHHKTFAFVEYEVPEAALLAQESMNGQMLGGRNLKVN 176
Score = 41.9 bits (94), Expect = 3e-04
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
+YV + ++E+ L +F G +V + + + H+G+G++EF AI M
Sbjct: 209 VYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGM 268
Query: 251 NMIKLYGKPVRVNK 292
NM L G+ +RV K
Sbjct: 269 NMFDLGGQYLRVGK 282
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 56.8 bits (131), Expect = 1e-08
Identities = 29/94 (30%), Positives = 57/94 (60%)
Frame = +2
Query: 50 ERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDA 229
+R+Q +++VG + V+E + +F ++G V+++ M DR T +GYGF+EF + A
Sbjct: 14 DRSQ-RSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTA 72
Query: 230 DYAIKVMNMIKLYGKPVRVNKASAHQKNLDVGAN 331
+ AI+ +N +L G+ +RV+ A+ + G++
Sbjct: 73 EVAIRNLNGYELSGRILRVDSAAGGMNMEEFGSS 106
Score = 50.4 bits (115), Expect = 9e-07
Identities = 26/77 (33%), Positives = 40/77 (51%)
Frame = +2
Query: 329 NVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIE 508
+VF+GN+ +V E + FS G +L K++ D ETG K + FI F + ++ AI
Sbjct: 19 SVFVGNISYDVSEDTIRSIFSKAGNVLSI-KMVHDRETGKPKGYGFIEFPDIQTAEVAIR 77
Query: 509 AMNNQYLCNRPISVSYA 559
+N L R + V A
Sbjct: 78 NLNGYELSGRILRVDSA 94
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 56.0 bits (129), Expect = 2e-08
Identities = 49/163 (30%), Positives = 81/163 (49%), Gaps = 4/163 (2%)
Frame = +2
Query: 20 FEKMAAGPIAERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYG 199
+E A GP + ++ IYVG + V E L LF +SG + ++ + D ++ +GY
Sbjct: 188 WEGPATGPAGQGHE---IYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYA 244
Query: 200 FVEFMGEEDADYAIKVMNMIKL-YGKPVRVNKASAHQKNLDVGANVFIGNL--DPEVDEK 370
FV + +EDA A K + ++ GKP++VN + A+ + +FIGN+ DE
Sbjct: 245 FVTYCNKEDAAAAAKTYDGHEISTGKPLKVNVSIANTR-------LFIGNIPKTKSKDEI 297
Query: 371 LLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFE-ASD 496
L A GV+ + D E ++ F F++F + ASD
Sbjct: 298 LEELKTHAEGVVDVIVYSVPDNEKIKNRGFCFVDFIDHKTASD 340
Score = 37.9 bits (84), Expect = 0.005
Identities = 20/78 (25%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +2
Query: 323 GANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAA 502
G +++G++ +V E L F G I ++M DP +G S+ +AF+ + + E + AA
Sbjct: 199 GHEIYVGHIPTDVFEDTLVPLFEKSGKIWDL-RLMMDPMSGASRGYAFVTYCNKEDAAAA 257
Query: 503 IEAMN-NQYLCNRPISVS 553
+ + ++ +P+ V+
Sbjct: 258 AKTYDGHEISTGKPLKVN 275
Score = 27.9 bits (59), Expect = 5.5
Identities = 22/80 (27%), Positives = 35/80 (43%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
+Y+ + + VTE L ELF + + V KD Y F+ F +D A++
Sbjct: 379 LYIRNIKEAVTEEKLNELFKEYASLDRVKKVKD--------YAFIHFNERDDCLKAMEEW 430
Query: 251 NMIKLYGKPVRVNKASAHQK 310
N +L G V + A Q+
Sbjct: 431 NGKELEGTVVEASLAKPPQE 450
>AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical
protein Y37D8A.21 protein.
Length = 282
Score = 55.6 bits (128), Expect = 2e-08
Identities = 31/86 (36%), Positives = 50/86 (58%)
Frame = +2
Query: 29 MAAGPIAERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVE 208
M P ++ TIYV + V E LL ELF+Q+GPVV V + +D V ++ + VE
Sbjct: 1 MEIKPTPSPPEERTIYVANFSEEVDEELLEELFIQAGPVVKVIL-RD-VRDSNAKFALVE 58
Query: 209 FMGEEDADYAIKVMNMIKLYGKPVRV 286
F E +AI++MN ++L+ + ++V
Sbjct: 59 FEDELSVLFAIELMNGVRLFNQELQV 84
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 54.8 bits (126), Expect = 4e-08
Identities = 28/77 (36%), Positives = 42/77 (54%)
Frame = +2
Query: 68 TIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKV 247
++YVG + TE L F G + NV + DR T +G+ F+EF E A A++
Sbjct: 6 SVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQ 65
Query: 248 MNMIKLYGKPVRVNKAS 298
MN + G+P+RVN A+
Sbjct: 66 MNGAEFNGRPLRVNLAN 82
Score = 50.8 bits (116), Expect = 7e-07
Identities = 28/79 (35%), Positives = 44/79 (55%)
Frame = +2
Query: 329 NVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIE 508
+V++GN + E+ L + FS+ G I +++ D ETG + FAFI FA ++ A+E
Sbjct: 6 SVYVGNAPFQTTEEELGNFFSSIGQI-NNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVE 64
Query: 509 AMNNQYLCNRPISVSYAFK 565
MN RP+ V+ A K
Sbjct: 65 QMNGAEFNGRPLRVNLANK 83
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 52.4 bits (120), Expect = 2e-07
Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 16/185 (8%)
Frame = +2
Query: 47 AERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEED 226
AE T+ + + L E F G V +V + D T +G +VEF EE
Sbjct: 19 AEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEES 78
Query: 227 ADYAIKVMNMIKLYGKPVRVNKASAHQK---NLDVGA-------------NVFIGNLDPE 358
+ +N +L G P+++ + A + N V + +V + NL P+
Sbjct: 79 VPLGL-ALNGQRLMGAPLQIQRTCAERNRAANSSVASTLGFVAPGNKGPTHVLVENLHPK 137
Query: 359 VDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYLCNR 538
+DEK++ D F +FG I + + ++ FA I F + + + + E +NN L R
Sbjct: 138 IDEKMIRDIFESFGRIEKID--LEVDSNRENRGFATITFRNADDAQKSCEQLNNFELAGR 195
Query: 539 PISVS 553
I +S
Sbjct: 196 CIRLS 200
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 52.4 bits (120), Expect = 2e-07
Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 16/185 (8%)
Frame = +2
Query: 47 AERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEED 226
AE T+ + + L E F G V +V + D T +G +VEF EE
Sbjct: 164 AEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEES 223
Query: 227 ADYAIKVMNMIKLYGKPVRVNKASAHQK---NLDVGA-------------NVFIGNLDPE 358
+ +N +L G P+++ + A + N V + +V + NL P+
Sbjct: 224 VPLGL-ALNGQRLMGAPLQIQRTCAERNRAANSSVASTLGFVAPGNKGPTHVLVENLHPK 282
Query: 359 VDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYLCNR 538
+DEK++ D F +FG I + + ++ FA I F + + + + E +NN L R
Sbjct: 283 IDEKMIRDIFESFGRIEKID--LEVDSNRENRGFATITFRNADDAQKSCEQLNNFELAGR 340
Query: 539 PISVS 553
I +S
Sbjct: 341 CIRLS 345
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 52.0 bits (119), Expect = 3e-07
Identities = 29/76 (38%), Positives = 40/76 (52%)
Frame = +2
Query: 68 TIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKV 247
++YVG + TE L F Q+G V NV + DR T +G+ FVEF E A A+
Sbjct: 5 SVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQ 64
Query: 248 MNMIKLYGKPVRVNKA 295
N + G+ +RVN A
Sbjct: 65 FNGVDFNGRALRVNLA 80
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/79 (29%), Positives = 39/79 (49%)
Frame = +2
Query: 323 GANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAA 502
G +V++GN + E L + FS G + +++ D ETG + FAF+ F A+ A
Sbjct: 3 GFSVYVGNAPFQTTEDDLGNYFSQAGNVSNV-RIVCDRETGRPRGFAFVEFTEEAAAQRA 61
Query: 503 IEAMNNQYLCNRPISVSYA 559
++ N R + V+ A
Sbjct: 62 VDQFNGVDFNGRALRVNLA 80
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 51.6 bits (118), Expect = 4e-07
Identities = 28/81 (34%), Positives = 44/81 (54%)
Frame = +2
Query: 56 NQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADY 235
+Q ++YVG + + TE + F G V NV + DR T +G+ FVEF E A
Sbjct: 3 SQGFSVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQR 62
Query: 236 AIKVMNMIKLYGKPVRVNKAS 298
A++ +N + G+ +RVN A+
Sbjct: 63 AVEQLNGVAFNGRNLRVNYAN 83
Score = 47.2 bits (107), Expect = 8e-06
Identities = 24/81 (29%), Positives = 45/81 (55%)
Frame = +2
Query: 323 GANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAA 502
G +V++GN+ + E+ + + F+A G + +++ D ETG + FAF+ F+ + A
Sbjct: 5 GFSVYVGNVPYQGTEEEIGNYFAAVGHV-NNVRIVYDRETGRPRGFAFVEFSEEAGAQRA 63
Query: 503 IEAMNNQYLCNRPISVSYAFK 565
+E +N R + V+YA K
Sbjct: 64 VEQLNGVAFNGRNLRVNYANK 84
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 48.4 bits (110), Expect = 4e-06
Identities = 25/78 (32%), Positives = 43/78 (55%)
Frame = +2
Query: 53 RNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDAD 232
R+ + T V L + E L +LF + G V+ + + +D+VT +G+ FV F +DA
Sbjct: 172 RSDENTCRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAA 231
Query: 233 YAIKVMNMIKLYGKPVRV 286
AI +N I++Y ++V
Sbjct: 232 RAIAELNDIRMYHMVLKV 249
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 48.0 bits (109), Expect = 5e-06
Identities = 25/74 (33%), Positives = 43/74 (58%)
Frame = +2
Query: 68 TIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKV 247
T+YVG L E ++ELF ++G V V M DR +T G+ FVE+ EDA+ A++
Sbjct: 38 TLYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTREDAELALQN 97
Query: 248 MNMIKLYGKPVRVN 289
++ ++ + +R +
Sbjct: 98 ISNTRMDDRVIRAD 111
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 48.0 bits (109), Expect = 5e-06
Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 5/151 (3%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
+++GGL + T L + F + G V + +D T+ +G+GF+ F+ D KV+
Sbjct: 47 MFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVD---KVL 103
Query: 251 N--MIKLYGKPVRVNKA---SAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVILQT 415
N +L GK + A K + VFIG L + + F +G + +
Sbjct: 104 NNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKV-ED 162
Query: 416 PKVMRDPETGNSKAFAFINFASFEASDAAIE 508
+M D T + F F+ F S E +D E
Sbjct: 163 AMLMFDKATQRHRGFGFVTFDSDEVADKVCE 193
Score = 46.4 bits (105), Expect = 1e-05
Identities = 27/87 (31%), Positives = 44/87 (50%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
+++GGL T + + F G V + + D+ TQ H+G+GFV F +E AD ++
Sbjct: 136 VFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEI- 194
Query: 251 NMIKLYGKPVRVNKASAHQKNLDVGAN 331
+ ++ GK V KA + L V N
Sbjct: 195 HFHEINGKMVECKKAQPKEVMLPVQLN 221
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 48.0 bits (109), Expect = 5e-06
Identities = 27/76 (35%), Positives = 44/76 (57%)
Frame = +2
Query: 323 GANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAA 502
GAN+FI +L + + L +TF+ FG IL KV D T SK F F+++ + +++ A
Sbjct: 334 GANLFIYHLPQDFGDSDLINTFAPFGGILSA-KVFIDKVTNLSKCFGFVSYENAQSATNA 392
Query: 503 IEAMNNQYLCNRPISV 550
I AMN + ++ + V
Sbjct: 393 ISAMNGFQIGSKRLKV 408
Score = 33.9 bits (74), Expect = 0.083
Identities = 22/93 (23%), Positives = 41/93 (44%)
Frame = +2
Query: 8 AVKSFEKMAAGPIAERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTH 187
A S +M + A +++ L +S L F G +++ + D+VT
Sbjct: 316 ATTSAAQMVGNGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLS 375
Query: 188 QGYGFVEFMGEEDADYAIKVMNMIKLYGKPVRV 286
+ +GFV + + A AI MN ++ K ++V
Sbjct: 376 KCFGFVSYENAQSATNAISAMNGFQIGSKRLKV 408
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 48.0 bits (109), Expect = 5e-06
Identities = 27/76 (35%), Positives = 44/76 (57%)
Frame = +2
Query: 323 GANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAA 502
GAN+FI +L + + L +TF+ FG IL KV D T SK F F+++ + +++ A
Sbjct: 498 GANLFIYHLPQDFGDSDLINTFAPFGGILSA-KVFIDKVTNLSKCFGFVSYENAQSATNA 556
Query: 503 IEAMNNQYLCNRPISV 550
I AMN + ++ + V
Sbjct: 557 ISAMNGFQIGSKRLKV 572
Score = 33.9 bits (74), Expect = 0.083
Identities = 22/93 (23%), Positives = 41/93 (44%)
Frame = +2
Query: 8 AVKSFEKMAAGPIAERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTH 187
A S +M + A +++ L +S L F G +++ + D+VT
Sbjct: 480 ATTSAAQMVGNGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLS 539
Query: 188 QGYGFVEFMGEEDADYAIKVMNMIKLYGKPVRV 286
+ +GFV + + A AI MN ++ K ++V
Sbjct: 540 KCFGFVSYENAQSATNAISAMNGFQIGSKRLKV 572
Score = 27.9 bits (59), Expect = 5.5
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = +2
Query: 50 ERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDA 229
E + +++G L + E L E+F + G + + + +D+ ++ +G FV F A
Sbjct: 137 ENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKS-RGCAFVTFTNRSCA 195
Query: 230 DYAIKVMN 253
A K M+
Sbjct: 196 VVATKEMH 203
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 48.0 bits (109), Expect = 5e-06
Identities = 27/76 (35%), Positives = 44/76 (57%)
Frame = +2
Query: 323 GANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAA 502
GAN+FI +L + + L +TF+ FG IL KV D T SK F F+++ + +++ A
Sbjct: 498 GANLFIYHLPQDFGDSDLINTFAPFGGILSA-KVFIDKVTNLSKCFGFVSYENAQSATNA 556
Query: 503 IEAMNNQYLCNRPISV 550
I AMN + ++ + V
Sbjct: 557 ISAMNGFQIGSKRLKV 572
Score = 33.9 bits (74), Expect = 0.083
Identities = 22/93 (23%), Positives = 41/93 (44%)
Frame = +2
Query: 8 AVKSFEKMAAGPIAERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTH 187
A S +M + A +++ L +S L F G +++ + D+VT
Sbjct: 480 ATTSAAQMVGNGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLS 539
Query: 188 QGYGFVEFMGEEDADYAIKVMNMIKLYGKPVRV 286
+ +GFV + + A AI MN ++ K ++V
Sbjct: 540 KCFGFVSYENAQSATNAISAMNGFQIGSKRLKV 572
Score = 27.9 bits (59), Expect = 5.5
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = +2
Query: 50 ERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDA 229
E + +++G L + E L E+F + G + + + +D+ ++ +G FV F A
Sbjct: 137 ENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKS-RGCAFVTFTNRSCA 195
Query: 230 DYAIKVMN 253
A K M+
Sbjct: 196 VVATKEMH 203
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 48.0 bits (109), Expect = 5e-06
Identities = 27/76 (35%), Positives = 44/76 (57%)
Frame = +2
Query: 323 GANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAA 502
GAN+FI +L + + L +TF+ FG IL KV D T SK F F+++ + +++ A
Sbjct: 427 GANLFIYHLPQDFGDSDLINTFAPFGGILSA-KVFIDKVTNLSKCFGFVSYENAQSATNA 485
Query: 503 IEAMNNQYLCNRPISV 550
I AMN + ++ + V
Sbjct: 486 ISAMNGFQIGSKRLKV 501
Score = 33.9 bits (74), Expect = 0.083
Identities = 22/93 (23%), Positives = 41/93 (44%)
Frame = +2
Query: 8 AVKSFEKMAAGPIAERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTH 187
A S +M + A +++ L +S L F G +++ + D+VT
Sbjct: 409 ATTSAAQMVGNGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLS 468
Query: 188 QGYGFVEFMGEEDADYAIKVMNMIKLYGKPVRV 286
+ +GFV + + A AI MN ++ K ++V
Sbjct: 469 KCFGFVSYENAQSATNAISAMNGFQIGSKRLKV 501
Score = 27.9 bits (59), Expect = 5.5
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = +2
Query: 50 ERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDA 229
E + +++G L + E L E+F + G + + + +D+ ++ +G FV F A
Sbjct: 137 ENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKS-RGCAFVTFTNRSCA 195
Query: 230 DYAIKVMN 253
A K M+
Sbjct: 196 VVATKEMH 203
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 48.0 bits (109), Expect = 5e-06
Identities = 27/76 (35%), Positives = 44/76 (57%)
Frame = +2
Query: 323 GANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAA 502
GAN+FI +L + + L +TF+ FG IL KV D T SK F F+++ + +++ A
Sbjct: 498 GANLFIYHLPQDFGDSDLINTFAPFGGILSA-KVFIDKVTNLSKCFGFVSYENAQSATNA 556
Query: 503 IEAMNNQYLCNRPISV 550
I AMN + ++ + V
Sbjct: 557 ISAMNGFQIGSKRLKV 572
Score = 33.9 bits (74), Expect = 0.083
Identities = 22/93 (23%), Positives = 41/93 (44%)
Frame = +2
Query: 8 AVKSFEKMAAGPIAERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTH 187
A S +M + A +++ L +S L F G +++ + D+VT
Sbjct: 480 ATTSAAQMVGNGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLS 539
Query: 188 QGYGFVEFMGEEDADYAIKVMNMIKLYGKPVRV 286
+ +GFV + + A AI MN ++ K ++V
Sbjct: 540 KCFGFVSYENAQSATNAISAMNGFQIGSKRLKV 572
Score = 27.9 bits (59), Expect = 5.5
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = +2
Query: 50 ERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDA 229
E + +++G L + E L E+F + G + + + +D+ ++ +G FV F A
Sbjct: 137 ENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKS-RGCAFVTFTNRSCA 195
Query: 230 DYAIKVMN 253
A K M+
Sbjct: 196 VVATKEMH 203
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 48.0 bits (109), Expect = 5e-06
Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 5/151 (3%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
+++GGL + T L + F + G V + +D T+ +G+GF+ F+ D KV+
Sbjct: 47 MFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVD---KVL 103
Query: 251 N--MIKLYGKPVRVNKA---SAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVILQT 415
N +L GK + A K + VFIG L + + F +G + +
Sbjct: 104 NNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKV-ED 162
Query: 416 PKVMRDPETGNSKAFAFINFASFEASDAAIE 508
+M D T + F F+ F S E +D E
Sbjct: 163 AMLMFDKATQRHRGFGFVTFDSDEVADKVCE 193
Score = 46.4 bits (105), Expect = 1e-05
Identities = 27/87 (31%), Positives = 44/87 (50%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
+++GGL T + + F G V + + D+ TQ H+G+GFV F +E AD ++
Sbjct: 136 VFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEI- 194
Query: 251 NMIKLYGKPVRVNKASAHQKNLDVGAN 331
+ ++ GK V KA + L V N
Sbjct: 195 HFHEINGKMVECKKAQPKEVMLPVQLN 221
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 47.6 bits (108), Expect = 6e-06
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRV-TQTHQGYGFVEFMGEEDADYAIKV 247
+ + L V ++ L E+F G + NV +P DR H+GYG+VE+ EDA+ +IK
Sbjct: 135 VVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDAEKSIKH 194
Query: 248 MNMIKLYGKPVRVNKASAHQ 307
M+ ++ G V V Q
Sbjct: 195 MDGGQIDGMAVHVEMTIGRQ 214
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 47.2 bits (107), Expect = 8e-06
Identities = 26/65 (40%), Positives = 36/65 (55%)
Frame = +2
Query: 323 GANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAA 502
G N+FI +L E + L F+ FG I+ KV D T SK F F+++ + +S AA
Sbjct: 428 GCNLFIYHLPQEFGDAELIQMFAPFGHIVSA-KVFVDRATNQSKCFGFVSYDNIHSSQAA 486
Query: 503 IEAMN 517
I AMN
Sbjct: 487 ITAMN 491
Score = 40.7 bits (91), Expect = 7e-04
Identities = 39/157 (24%), Positives = 66/157 (42%), Gaps = 8/157 (5%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
++VG + + E L LF Q G + + KD+ T H+G F+ + + A +
Sbjct: 31 LFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQATL 90
Query: 251 NMIK--------LYGKPVRVNKASAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVI 406
+ K + KP + A K+ +FIG L + E + F+ FG
Sbjct: 91 HDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGE- 149
Query: 407 LQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMN 517
L V+R + G SK AF+ + + AI A++
Sbjct: 150 LDEVTVLRGAD-GASKGCAFVKYKHGLDAHMAISALH 185
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 47.2 bits (107), Expect = 8e-06
Identities = 26/65 (40%), Positives = 36/65 (55%)
Frame = +2
Query: 323 GANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAA 502
G N+FI +L E + L F+ FG I+ KV D T SK F F+++ + +S AA
Sbjct: 428 GCNLFIYHLPQEFGDAELIQMFAPFGHIVSA-KVFVDRATNQSKCFGFVSYDNIHSSQAA 486
Query: 503 IEAMN 517
I AMN
Sbjct: 487 ITAMN 491
Score = 40.7 bits (91), Expect = 7e-04
Identities = 39/157 (24%), Positives = 66/157 (42%), Gaps = 8/157 (5%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
++VG + + E L LF Q G + + KD+ T H+G F+ + + A +
Sbjct: 31 LFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQATL 90
Query: 251 NMIK--------LYGKPVRVNKASAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVI 406
+ K + KP + A K+ +FIG L + E + F+ FG
Sbjct: 91 HDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGE- 149
Query: 407 LQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMN 517
L V+R + G SK AF+ + + AI A++
Sbjct: 150 LDEVTVLRGAD-GASKGCAFVKYKHGLDAHMAISALH 185
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 46.4 bits (105), Expect = 1e-05
Identities = 23/87 (26%), Positives = 47/87 (54%)
Frame = +2
Query: 62 DATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAI 241
D ++ G L + V++ LL + F + + ++ T +GYGFV F ED A+
Sbjct: 202 DFRVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAM 261
Query: 242 KVMNMIKLYGKPVRVNKASAHQKNLDV 322
+ M+ + +P+++ K++ ++N+DV
Sbjct: 262 REMDGKYVGNRPIKLRKSAWKERNIDV 288
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/81 (27%), Positives = 45/81 (55%)
Frame = +2
Query: 65 ATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIK 244
A IY+GGL ++E + +F Q G V+N+++ +D+ T +G+ F+ + + A+
Sbjct: 38 AWIYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVD 97
Query: 245 VMNMIKLYGKPVRVNKASAHQ 307
N I L+ + +RV+ ++
Sbjct: 98 NFNGISLHKRMIRVDHVEEYK 118
Score = 43.6 bits (98), Expect = 1e-04
Identities = 28/89 (31%), Positives = 45/89 (50%)
Frame = +2
Query: 290 KASAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFI 469
K S HQ D A ++IG L + E + FS +G ++ ++RD +TG SK FAF+
Sbjct: 27 KKSWHQTYKD-SAWIYIGGLSYALSEGDVIAVFSQYGEVMNI-NLIRDKDTGKSKGFAFL 84
Query: 470 NFASFEASDAAIEAMNNQYLCNRPISVSY 556
+ ++ A++ N L R I V +
Sbjct: 85 CYKDQRSTILAVDNFNGISLHKRMIRVDH 113
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 45.2 bits (102), Expect = 3e-05
Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 11/190 (5%)
Frame = +2
Query: 14 KSFEKMAAGPIAERN--QDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTH 187
K F++M G + Q +++GGL T+ L F Q GPVV+ + +D T+
Sbjct: 30 KQFQQMGMGQYQHDSPPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHS 89
Query: 188 QGYGFVEFMGEEDADYAIKVMNMIKLYGKPVRVNKASAHQKNLDVGANVFIGNLDPEVDE 367
+G+GFV F A+ A+ KL GK V +A ++ + F DP
Sbjct: 90 RGFGFVTFASIFSAESAMN-DRPHKLGGKTVDSKRAIPREQMSSMIPPPFF-ETDPAPGC 147
Query: 368 KLLYD-------TFSAFGVILQTPKVMRDPE-TGNSKAFAFINFASFEASDAAIEAMNNQ 523
KLL + + + V +T + E G + F+ + E++D + + +
Sbjct: 148 KLLLNGITNGVHSVDSLRVYFETFGTLDQVEILGQPRGLGFVIYEDKESADRCLAHNSGR 207
Query: 524 YLCN-RPISV 550
++ N R I V
Sbjct: 208 HIVNERKIEV 217
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 45.2 bits (102), Expect = 3e-05
Identities = 28/75 (37%), Positives = 37/75 (49%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
I+VGGL ++ L E F Q G + + DR TQ +GYGFV A+ A K
Sbjct: 37 IFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKDP 96
Query: 251 NMIKLYGKPVRVNKA 295
N I + G+ VN A
Sbjct: 97 NPI-IDGRKANVNLA 110
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 44.8 bits (101), Expect = 4e-05
Identities = 22/73 (30%), Positives = 41/73 (56%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
++V + + TE + + F + G + N+H+ DR T +GY VE+ +++A+ AI
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 251 NMIKLYGKPVRVN 289
N L G+ V+V+
Sbjct: 117 NDTDLLGQNVKVD 129
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 44.4 bits (100), Expect = 6e-05
Identities = 47/191 (24%), Positives = 83/191 (43%), Gaps = 11/191 (5%)
Frame = +2
Query: 11 VKSFEKMAAGPIAERN--QDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQT 184
++ F++M G + Q +++GGL T+ L F Q GPVV+ + +D T+
Sbjct: 50 LRQFQQMGMGQYQHDSPPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKH 109
Query: 185 HQGYGFVEFMGEEDADYAIKVMNMIKLYGKPVRVNKASAHQKNLDVGANVFIGNLDPEVD 364
+G+GFV F A+ A+ KL GK V +A ++ + F DP
Sbjct: 110 SRGFGFVTFASIFSAESAMN-DRPHKLGGKTVDSKRAIPREQMSSMIPPPFF-ETDPAPG 167
Query: 365 EKLLYD-------TFSAFGVILQTPKVMRDPE-TGNSKAFAFINFASFEASDAAIEAMNN 520
KLL + + + V +T + E G + F+ + E++D + +
Sbjct: 168 CKLLLNGITNGVHSVDSLRVYFETFGTLDQVEILGQPRGLGFVIYEDKESADRCLAHNSG 227
Query: 521 QYLCN-RPISV 550
+++ N R I V
Sbjct: 228 RHIVNERKIEV 238
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 44.4 bits (100), Expect = 6e-05
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Frame = +2
Query: 17 SFEKMAAGPIAERNQ--DA-TIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTH 187
S K P AE + DA ++YVG +D + T S + E F G V V +PKD+ T
Sbjct: 27 SASKKYMAPTAEEQEKTDARSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQ 86
Query: 188 QGYGFVEFMGEEDADYAI 241
+ + FVEF E A+
Sbjct: 87 KNFAFVEFQKLESVQLAL 104
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/76 (27%), Positives = 43/76 (56%)
Frame = +2
Query: 68 TIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKV 247
++ + L + T + L F + G + +VH+P+D+ ++ +G+GFV F DA++A+
Sbjct: 20 SLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDR 79
Query: 248 MNMIKLYGKPVRVNKA 295
+ + G+ +RV A
Sbjct: 80 TDGKLVDGRELRVTLA 95
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/76 (27%), Positives = 43/76 (56%)
Frame = +2
Query: 68 TIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKV 247
++ + L + T + L F + G + +VH+P+D+ ++ +G+GFV F DA++A+
Sbjct: 20 SLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDR 79
Query: 248 MNMIKLYGKPVRVNKA 295
+ + G+ +RV A
Sbjct: 80 TDGKLVDGRELRVTLA 95
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 43.2 bits (97), Expect = 1e-04
Identities = 47/188 (25%), Positives = 81/188 (43%), Gaps = 11/188 (5%)
Frame = +2
Query: 20 FEKMAAGPIAERN--QDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQG 193
F++M G + Q +++GGL T+ L F Q GPVV+ + +D T+ +G
Sbjct: 52 FQQMGMGQYQHDSPPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRG 111
Query: 194 YGFVEFMGEEDADYAIKVMNMIKLYGKPVRVNKASAHQKNLDVGANVFIGNLDPEVDEKL 373
+GFV F A+ A+ KL GK V +A ++ + F DP KL
Sbjct: 112 FGFVTFASIFSAESAMN-DRPHKLGGKTVDSKRAIPREQMSSMIPPPFF-ETDPAPGCKL 169
Query: 374 LYD-------TFSAFGVILQTPKVMRDPE-TGNSKAFAFINFASFEASDAAIEAMNNQYL 529
L + + + V +T + E G + F+ + E++D + + +++
Sbjct: 170 LLNGITNGVHSVDSLRVYFETFGTLDQVEILGQPRGLGFVIYEDKESADRCLAHNSGRHI 229
Query: 530 CN-RPISV 550
N R I V
Sbjct: 230 VNERKIEV 237
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 40.7 bits (91), Expect = 7e-04
Identities = 25/80 (31%), Positives = 42/80 (52%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
I++GGL + +TE + EL GP+ + D + +GY F E++ D AI +
Sbjct: 293 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEYLDPTLTDQAIAGL 351
Query: 251 NMIKLYGKPVRVNKASAHQK 310
N ++L K + V A A+Q+
Sbjct: 352 NGMQLGDKQLVVQLACANQQ 371
Score = 33.9 bits (74), Expect = 0.083
Identities = 23/82 (28%), Positives = 39/82 (47%)
Frame = +2
Query: 314 LDVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEAS 493
+D +FIG L + E + + +FG L+ + D + GNSK +AF + +
Sbjct: 287 VDSANKIFIGGLPNYLTEDQVKELLCSFGP-LKAFSLNVDSQ-GNSKGYAFAEYLDPTLT 344
Query: 494 DAAIEAMNNQYLCNRPISVSYA 559
D AI +N L ++ + V A
Sbjct: 345 DQAIAGLNGMQLGDKQLVVQLA 366
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 40.7 bits (91), Expect = 7e-04
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +2
Query: 14 KSFEKMAAGPIAERNQDA----TIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQ 181
K E A P E Q A ++++G +D T + E F G +V +PKD+ T+
Sbjct: 34 KHLESAAYVPPTEEEQKAIDAKSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTK 93
Query: 182 THQGYGFVEFMGEEDADYAIKVMNMIKLYGKPVRV 286
+ + ++EF + A+ VMN +P+ V
Sbjct: 94 KQKNFAYIEFDDSSSIENAL-VMNGSLFRSRPIVV 127
Score = 39.1 bits (87), Expect = 0.002
Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 3/118 (2%)
Frame = +2
Query: 209 FMGEEDADYAI--KVMN-MIKLYGKPVRVNKASAHQKNLDVGANVFIGNLDPEVDEKLLY 379
F E +A+ AI ++ N M K V QK +D +VFIGN+D + +
Sbjct: 14 FEMEIEAESAILQQIQNKMAKHLESAAYVPPTEEEQKAIDA-KSVFIGNVDFNSTIEEIE 72
Query: 380 DTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYLCNRPISVS 553
+ F G I++T + +D T K FA+I F + + A+ MN +RPI V+
Sbjct: 73 EHFKGCGQIVKT-TIPKDKFTKKQKNFAYIEFDDSSSIENAL-VMNGSLFRSRPIVVT 128
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 40.7 bits (91), Expect = 7e-04
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Frame = +2
Query: 14 KSFEKMAAGPIAERNQDA----TIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQ 181
K+ E A P E Q A ++++G +D T + E F G +V +PKD+ T+
Sbjct: 40 KNLESAAYVPPTEEEQKAIDAKSVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTK 99
Query: 182 THQGYGFVEFMGEEDADYAIKVMNMIKLYGKPVRV 286
+ + ++EF + A+ VMN +P+ V
Sbjct: 100 KQKNFAYIEFDDSSSIENAL-VMNGSLFRSRPIVV 133
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 40.7 bits (91), Expect = 7e-04
Identities = 35/151 (23%), Positives = 69/151 (45%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
++VG L + V E+ L ELF G + ++ + +G+ F+ A+ A + +
Sbjct: 118 LFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTRAHAESAKEAI 170
Query: 251 NMIKLYGKPVRVNKASAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMR 430
+ ++G+ VRV + + H GA + + L P V ++LY FS FG + + ++
Sbjct: 171 DGRIIHGRQVRV-RFAVH------GAAIRVKELSPTVSNEMLYHAFSHFGDVERAVHIV- 222
Query: 431 DPETGNSKAFAFINFASFEASDAAIEAMNNQ 523
E G + F + A+ A+ ++
Sbjct: 223 -DEKGRPTGEGIVEFERKPNCNEAMAAIRDK 252
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 40.7 bits (91), Expect = 7e-04
Identities = 35/151 (23%), Positives = 69/151 (45%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
++VG L + V E+ L ELF G + ++ + +G+ F+ A+ A + +
Sbjct: 118 LFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTRAHAESAKEAI 170
Query: 251 NMIKLYGKPVRVNKASAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMR 430
+ ++G+ VRV + + H GA + + L P V ++LY FS FG + + ++
Sbjct: 171 DGRIIHGRQVRV-RFAVH------GAAIRVKELSPTVSNEMLYHAFSHFGDVERAVHIV- 222
Query: 431 DPETGNSKAFAFINFASFEASDAAIEAMNNQ 523
E G + F + A+ A+ ++
Sbjct: 223 -DEKGRPTGEGIVEFERKPNCNEAMAAIRDK 252
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 40.7 bits (91), Expect = 7e-04
Identities = 25/80 (31%), Positives = 42/80 (52%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
I++GGL + +TE + EL GP+ + D + +GY F E++ D AI +
Sbjct: 293 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEYLDPTLTDQAIAGL 351
Query: 251 NMIKLYGKPVRVNKASAHQK 310
N ++L K + V A A+Q+
Sbjct: 352 NGMQLGDKQLVVQLACANQQ 371
Score = 33.9 bits (74), Expect = 0.083
Identities = 23/82 (28%), Positives = 39/82 (47%)
Frame = +2
Query: 314 LDVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEAS 493
+D +FIG L + E + + +FG L+ + D + GNSK +AF + +
Sbjct: 287 VDSANKIFIGGLPNYLTEDQVKELLCSFGP-LKAFSLNVDSQ-GNSKGYAFAEYLDPTLT 344
Query: 494 DAAIEAMNNQYLCNRPISVSYA 559
D AI +N L ++ + V A
Sbjct: 345 DQAIAGLNGMQLGDKQLVVQLA 366
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 40.7 bits (91), Expect = 7e-04
Identities = 25/80 (31%), Positives = 42/80 (52%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
I++GGL + +TE + EL GP+ + D + +GY F E++ D AI +
Sbjct: 268 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEYLDPTLTDQAIAGL 326
Query: 251 NMIKLYGKPVRVNKASAHQK 310
N ++L K + V A A+Q+
Sbjct: 327 NGMQLGDKQLVVQLACANQQ 346
Score = 33.9 bits (74), Expect = 0.083
Identities = 23/82 (28%), Positives = 39/82 (47%)
Frame = +2
Query: 314 LDVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEAS 493
+D +FIG L + E + + +FG L+ + D + GNSK +AF + +
Sbjct: 262 VDSANKIFIGGLPNYLTEDQVKELLCSFGP-LKAFSLNVDSQ-GNSKGYAFAEYLDPTLT 319
Query: 494 DAAIEAMNNQYLCNRPISVSYA 559
D AI +N L ++ + V A
Sbjct: 320 DQAIAGLNGMQLGDKQLVVQLA 341
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 40.7 bits (91), Expect = 7e-04
Identities = 25/80 (31%), Positives = 42/80 (52%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
I++GGL + +TE + EL GP+ + D + +GY F E++ D AI +
Sbjct: 271 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEYLDPTLTDQAIAGL 329
Query: 251 NMIKLYGKPVRVNKASAHQK 310
N ++L K + V A A+Q+
Sbjct: 330 NGMQLGDKQLVVQLACANQQ 349
Score = 33.9 bits (74), Expect = 0.083
Identities = 23/82 (28%), Positives = 39/82 (47%)
Frame = +2
Query: 314 LDVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEAS 493
+D +FIG L + E + + +FG L+ + D + GNSK +AF + +
Sbjct: 265 VDSANKIFIGGLPNYLTEDQVKELLCSFGP-LKAFSLNVDSQ-GNSKGYAFAEYLDPTLT 322
Query: 494 DAAIEAMNNQYLCNRPISVSYA 559
D AI +N L ++ + V A
Sbjct: 323 DQAIAGLNGMQLGDKQLVVQLA 344
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/76 (30%), Positives = 43/76 (56%)
Frame = +2
Query: 332 VFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEA 511
+F+ L+P ++ L FS FG I +++RD +G+S +AFI F + ++ + A
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKI-NNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFK 301
Query: 512 MNNQYLCNRPISVSYA 559
M+N + +R I V ++
Sbjct: 302 MDNVLIDDRRIHVDFS 317
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/81 (20%), Positives = 39/81 (48%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
++V L+ T+ L +F + G + N + +DR + Y F+EF + + A M
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 251 NMIKLYGKPVRVNKASAHQKN 313
+ + + + + V+ + + +N
Sbjct: 303 DNVLIDDRRIHVDFSQSVSQN 323
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/76 (30%), Positives = 43/76 (56%)
Frame = +2
Query: 332 VFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEA 511
+F+ L+P ++ L FS FG I +++RD +G+S +AFI F + ++ + A
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKI-NNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFK 301
Query: 512 MNNQYLCNRPISVSYA 559
M+N + +R I V ++
Sbjct: 302 MDNVLIDDRRIHVDFS 317
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/81 (20%), Positives = 39/81 (48%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
++V L+ T+ L +F + G + N + +DR + Y F+EF + + A M
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 251 NMIKLYGKPVRVNKASAHQKN 313
+ + + + + V+ + + +N
Sbjct: 303 DNVLIDDRRIHVDFSQSVSQN 323
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/76 (30%), Positives = 43/76 (56%)
Frame = +2
Query: 332 VFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEA 511
+F+ L+P ++ L FS FG I +++RD +G+S +AFI F + ++ + A
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKI-NNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFK 232
Query: 512 MNNQYLCNRPISVSYA 559
M+N + +R I V ++
Sbjct: 233 MDNVLIDDRRIHVDFS 248
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/81 (20%), Positives = 39/81 (48%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
++V L+ T+ L +F + G + N + +DR + Y F+EF + + A M
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 233
Query: 251 NMIKLYGKPVRVNKASAHQKN 313
+ + + + + V+ + + +N
Sbjct: 234 DNVLIDDRRIHVDFSQSVSQN 254
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/83 (28%), Positives = 42/83 (50%)
Frame = +2
Query: 62 DATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAI 241
DA +YVGGL T L E+F + G + V V + G+ FVE+ DA+ A+
Sbjct: 2 DAKVYVGGLPSDATSQELEEIFDRFGRIRKVW-----VARRPPGFAFVEYDDVRDAEDAV 56
Query: 242 KVMNMIKLYGKPVRVNKASAHQK 310
+ ++ ++ G RV ++ ++
Sbjct: 57 RALDGSRICGVRARVELSTGQRR 79
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/83 (28%), Positives = 42/83 (50%)
Frame = +2
Query: 62 DATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAI 241
DA +YVGGL T L E+F + G + V V + G+ FVE+ DA+ A+
Sbjct: 2 DAKVYVGGLPSDATSQELEEIFDRFGRIRKVW-----VARRPPGFAFVEYDDVRDAEDAV 56
Query: 242 KVMNMIKLYGKPVRVNKASAHQK 310
+ ++ ++ G RV ++ ++
Sbjct: 57 RALDGSRICGVRARVELSTGQRR 79
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/83 (28%), Positives = 42/83 (50%)
Frame = +2
Query: 62 DATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAI 241
DA +YVGGL T L E+F + G + V V + G+ FVE+ DA+ A+
Sbjct: 2 DAKVYVGGLPSDATSQELEEIFDRFGRIRKVW-----VARRPPGFAFVEYDDVRDAEDAV 56
Query: 242 KVMNMIKLYGKPVRVNKASAHQK 310
+ ++ ++ G RV ++ ++
Sbjct: 57 RALDGSRICGVRARVELSTGQRR 79
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 39.5 bits (88), Expect = 0.002
Identities = 27/75 (36%), Positives = 35/75 (46%)
Frame = +2
Query: 344 NLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQ 523
NL EK L D F FG I + V P +GNS+ F FI F E + AA + + N
Sbjct: 82 NLSSYTTEKDLRDVFGEFGEINKCDLVYDRP-SGNSRGFGFIYFNLIEDATAARDKLCNT 140
Query: 524 YLCNRPISVSYAFKK 568
L I V ++ K
Sbjct: 141 DLDGHKIRVDFSLTK 155
Score = 31.1 bits (67), Expect = 0.59
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +2
Query: 77 VGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVMNM 256
V L TE L ++F + G + + DR + +G+GF+ F EDA A +
Sbjct: 80 VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCN 139
Query: 257 IKLYGKPVRVN 289
L G +RV+
Sbjct: 140 TDLDGHKIRVD 150
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical protein
T23F6.4 protein.
Length = 872
Score = 37.9 bits (84), Expect = 0.005
Identities = 45/194 (23%), Positives = 83/194 (42%), Gaps = 24/194 (12%)
Frame = +2
Query: 50 ERNQDATIYVGGLDDRVTESLLWELF-------VQSGPVVNVHMPKDRVTQTHQGYGFVE 208
E +T++V L T+ L LF V+S + P + G+GFV+
Sbjct: 636 EIESGSTLFVKNLAFDTTDGSLEFLFRKRYGDLVKSAQISKKLNPAEPTKPLSMGFGFVQ 695
Query: 209 FMGEEDADYAIKVMNMIKLYGKPVRVNKASAHQKNLDVGA---------------NVFIG 343
F DA A+K M L G + + +H++N D GA + +
Sbjct: 696 FYTAFDAKTALKDMQGELLDGHSLELK--ISHRENADKGALKRKEVKQKEQGECTKLLVR 753
Query: 344 NLDPEVDEKLLYDTFSAFGVILQTPKVMRDP-ETGNSKAFAFINFASFEASDAAIEAM-N 517
NL E K + F FG + +T ++ + P + + F F++F S + + A +++ +
Sbjct: 754 NLPFEASVKEVETLFETFGAV-KTIRIPKKPGQKQQHRGFGFVDFISADEAHRAFDSLVH 812
Query: 518 NQYLCNRPISVSYA 559
+ +L R + + +A
Sbjct: 813 STHLYGRRLVLEWA 826
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 37.9 bits (84), Expect = 0.005
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 3/153 (1%)
Frame = +2
Query: 56 NQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEF--MGEEDA 229
+Q + V G+D + T+ + F G VV + K + +G+GFV +GE++
Sbjct: 170 SQPVDLIVLGVDFKTTDECFQKYFEDIGTVVFCEI-KRKSDGNSKGFGFVRMSSVGEQNK 228
Query: 230 DYAIKVMNMIKLYGKPVRVNKASAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVIL 409
AI +MI V+V Q + + +F+G L +VDE L F
Sbjct: 229 VLAIP-QHMIDGRRCDVKVPDGRDKQGRPSI-SRIFVGRLTDKVDEHQLRKVFGDEAKSY 286
Query: 410 QTPKVMRDPETGNS-KAFAFINFASFEASDAAI 505
V+ D + FAF+ +S EA++ +
Sbjct: 287 IETAVVTDVFIPKPFRGFAFVTLSSAEAAERIV 319
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 37.5 bits (83), Expect = 0.007
Identities = 24/81 (29%), Positives = 40/81 (49%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
++V + + E L +F + GPVV+V + + + +G+GFV +DAD A
Sbjct: 102 LHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNE--RGSKGFGFVTMQNPDDADRARAEF 159
Query: 251 NMIKLYGKPVRVNKASAHQKN 313
N + G+ V VN A+ N
Sbjct: 160 NGTTIEGRRVEVNLATQRVHN 180
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 37.5 bits (83), Expect = 0.007
Identities = 24/81 (29%), Positives = 40/81 (49%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
++V + + E L +F + GPVV+V + + + +G+GFV +DAD A
Sbjct: 102 LHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNE--RGSKGFGFVTMQNPDDADRARAEF 159
Query: 251 NMIKLYGKPVRVNKASAHQKN 313
N + G+ V VN A+ N
Sbjct: 160 NGTTIEGRRVEVNLATQRVHN 180
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 36.7 bits (81), Expect = 0.012
Identities = 24/86 (27%), Positives = 42/86 (48%)
Frame = +2
Query: 32 AAGPIAERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEF 211
A P A + T++VG ++ +ES L F G + + M D + +GY F+E+
Sbjct: 93 AENPRASEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHDEAGKP-RGYAFIEY 151
Query: 212 MGEEDADYAIKVMNMIKLYGKPVRVN 289
+ + A K + IK+ GK + V+
Sbjct: 152 SDKAEMHTAYKKADGIKVDGKRLVVD 177
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +2
Query: 287 NKASAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAF 466
N A + + D +F+G ++ E E L F A+G I + M E G + +AF
Sbjct: 91 NPAENPRASEDPYRTLFVGRINYETSESKLRREFEAYGKIKKL--TMVHDEAGKPRGYAF 148
Query: 467 INFA 478
I ++
Sbjct: 149 IEYS 152
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 36.3 bits (80), Expect = 0.016
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +2
Query: 365 EKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMN 517
EK L F FG +L+ +V R+ TGN K +A++ F + ++ A E+MN
Sbjct: 45 EKELLGYFRQFGNVLRI-RVARNRRTGNHKGWAYVGFDNKAVAEIAAESMN 94
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 35.1 bits (77), Expect = 0.036
Identities = 21/77 (27%), Positives = 38/77 (49%)
Frame = +2
Query: 56 NQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADY 235
++D +YVG L V E + ++F + G + V + R + FVEF DA+
Sbjct: 6 SEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGR----GPAFAFVEFEDHRDAED 61
Query: 236 AIKVMNMIKLYGKPVRV 286
A++ + + G+ +RV
Sbjct: 62 AVRARDGYEFDGRRIRV 78
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 35.1 bits (77), Expect = 0.036
Identities = 21/77 (27%), Positives = 38/77 (49%)
Frame = +2
Query: 56 NQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADY 235
++D +YVG L V E + ++F + G + V + R + FVEF DA+
Sbjct: 6 SEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGR----GPAFAFVEFEDHRDAED 61
Query: 236 AIKVMNMIKLYGKPVRV 286
A++ + + G+ +RV
Sbjct: 62 AVRARDGYEFDGRRIRV 78
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 34.7 bits (76), Expect = 0.048
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = +2
Query: 122 LFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVMNMIKLYGKPVRVNKASA 301
+F + GPVV+V + + + +G+GFV +DAD A N + G+ V VN A+
Sbjct: 1 MFEKVGPVVDVEIIFNE--RGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQ 58
Query: 302 HQKN 313
N
Sbjct: 59 RVHN 62
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 34.3 bits (75), Expect = 0.063
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDAD 232
I+VGG TE+ L E F + V +V M K Q+ +GYGF+ F E+ A+
Sbjct: 68 IFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQS-KGYGFITFETEDQAE 120
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 34.3 bits (75), Expect = 0.063
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDAD 232
I+VGG TE+ L E F + V +V M K Q+ +GYGF+ F E+ A+
Sbjct: 69 IFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQS-KGYGFITFETEDQAE 121
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 33.9 bits (74), Expect = 0.083
Identities = 24/72 (33%), Positives = 37/72 (51%)
Frame = +2
Query: 65 ATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIK 244
A IY+G L RV+E + F G + +V + G+GFVEF + DA+ A+
Sbjct: 3 ARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKN--------GFGFVEFDDKRDAEDAVH 54
Query: 245 VMNMIKLYGKPV 280
+N +L G+ V
Sbjct: 55 DLNGKELGGERV 66
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 33.9 bits (74), Expect = 0.083
Identities = 24/72 (33%), Positives = 37/72 (51%)
Frame = +2
Query: 65 ATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIK 244
A IY+G L RV+E + F G + +V + G+GFVEF + DA+ A+
Sbjct: 3 ARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKN--------GFGFVEFDDKRDAEDAVH 54
Query: 245 VMNMIKLYGKPV 280
+N +L G+ V
Sbjct: 55 DLNGKELGGERV 66
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 33.9 bits (74), Expect = 0.083
Identities = 24/72 (33%), Positives = 37/72 (51%)
Frame = +2
Query: 65 ATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIK 244
A IY+G L RV+E + F G + +V + G+GFVEF + DA+ A+
Sbjct: 3 ARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKN--------GFGFVEFDDKRDAEDAVH 54
Query: 245 VMNMIKLYGKPV 280
+N +L G+ V
Sbjct: 55 DLNGKELGGERV 66
>U55857-7|AAA98033.1| 217|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 3 protein.
Length = 217
Score = 33.9 bits (74), Expect = 0.083
Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Frame = +2
Query: 44 IAERNQDATIYVGGLDDRVTESLLWE----LFVQSGPVVNV-HMPKDRVTQTHQGYGFVE 208
+A+ N + TIYV L+++V + L +F Q G ++ + K+++ +G +
Sbjct: 1 MADINPNHTIYVNNLNEKVKKDELKRSLHMVFTQFGEIIQLMSFRKEKM----RGQAHIV 56
Query: 209 FMGEEDADYAIKVMNMIKLYGKPVRVNKA 295
F A A++ + YGKP+R+ A
Sbjct: 57 FKEVSSASNALRALQGFPFYGKPMRIQYA 85
Score = 27.9 bits (59), Expect = 5.5
Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +2
Query: 446 NSKAFAFINFASFEASDAAIEAMNN-QYLCNRPISVSYAFK 565
N+K FAFI + S + S+ A +A++N + + I+V +A K
Sbjct: 177 NTKDFAFIEYESEDLSEPARQALDNFRITPTQQITVKFASK 217
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 33.9 bits (74), Expect = 0.083
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = +2
Query: 302 HQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFAS 481
H + +D+ VF+G L V + + FS FGV+L + D + G K A + F
Sbjct: 311 HNRIIDIHRTVFLGGLPRIVTAEEIAQMFSEFGVVLLV-TIDIDQDYGYPKGAARVTFER 369
Query: 482 FEASDAAIE 508
A + A+E
Sbjct: 370 DSAFNRALE 378
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 33.9 bits (74), Expect = 0.083
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = +2
Query: 302 HQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFAS 481
H + +D+ VF+G L V + + FS FGV+L + D + G K A + F
Sbjct: 311 HNRIIDIHRTVFLGGLPRIVTAEEIAQMFSEFGVVLLV-TIDIDQDYGYPKGAARVTFER 369
Query: 482 FEASDAAIE 508
A + A+E
Sbjct: 370 DSAFNRALE 378
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 33.9 bits (74), Expect = 0.083
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = +2
Query: 302 HQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFAS 481
H + +D+ VF+G L V + + FS FGV+L + D + G K A + F
Sbjct: 97 HNRIIDIHRTVFLGGLPRIVTAEEIAQMFSEFGVVLLV-TIDIDQDYGYPKGAARVTFER 155
Query: 482 FEASDAAIE 508
A + A+E
Sbjct: 156 DSAFNRALE 164
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 33.9 bits (74), Expect = 0.083
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = +2
Query: 302 HQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFAS 481
H + +D+ VF+G L V + + FS FGV+L + D + G K A + F
Sbjct: 311 HNRIIDIHRTVFLGGLPRIVTAEEIAQMFSEFGVVLLV-TIDIDQDYGYPKGAARVTFER 369
Query: 482 FEASDAAIE 508
A + A+E
Sbjct: 370 DSAFNRALE 378
>U80455-3|AAO38606.1| 145|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform c protein.
Length = 145
Score = 33.5 bits (73), Expect = 0.11
Identities = 23/61 (37%), Positives = 33/61 (54%)
Frame = +2
Query: 323 GANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAA 502
GAN+FI +L + + L +TF+ FG IL + KV D T SK F F F+ ++
Sbjct: 75 GANLFIYHLPQDFGDSDLINTFAPFGGIL-SAKVFIDKVTNLSKCFG--EFYLFQKKNSK 131
Query: 503 I 505
I
Sbjct: 132 I 132
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 32.3 bits (70), Expect = 0.25
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = +2
Query: 317 DVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASD 496
+ G V++ ++ + L F +G I Q+ + DP+TG + FA I F S + ++
Sbjct: 22 NTGQTVYLTHVKWVTGKSQLEHYFKRYGSI-QSVNMFYDPDTGLHRGFASITFDSKDGAN 80
Query: 497 AAIE 508
AIE
Sbjct: 81 KAIE 84
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = +2
Query: 53 RNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDAD 232
+N T+Y+ + +S L F + G + +V+M D T H+G+ + F ++ A+
Sbjct: 21 KNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGAN 80
Query: 233 YAIK 244
AI+
Sbjct: 81 KAIE 84
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 32.3 bits (70), Expect = 0.25
Identities = 21/70 (30%), Positives = 36/70 (51%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
+Y+G L +R ++ + F G + +V M G+GFV+F + DAD A+ +
Sbjct: 4 VYIGRLPNRASDRDVEHFFRGYGKLSDVIMKN--------GFGFVDFQDQRDADDAVHDL 55
Query: 251 NMIKLYGKPV 280
N +L G+ V
Sbjct: 56 NGKELCGERV 65
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 32.3 bits (70), Expect = 0.25
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +2
Query: 386 FSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIE 508
+S FG I VMRDP T S+ F F+ F+ DAA++
Sbjct: 5 YSQFGEITDII-VMRDPTTKRSRGFGFVTFSGKTEVDAAMK 44
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 32.3 bits (70), Expect = 0.25
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +2
Query: 386 FSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIE 508
+S FG I VMRDP T S+ F F+ F+ DAA++
Sbjct: 5 YSQFGEITDII-VMRDPTTKRSRGFGFVTFSGKTEVDAAMK 44
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 30.7 bits (66), Expect = 0.78
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 137 GPVVNVHMPKDRVT-QTHQGYGFVEFMGEEDADYAIKVMNMIKLYGKPVRVNKA 295
G V + +P R +T G+GF++F+ + DA+ + N K+ G+ V + A
Sbjct: 119 GKFVEIVLPPSRKDPKTCAGFGFIQFVEKADAEKGREFFNTNKVLGRSVAADWA 172
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 30.7 bits (66), Expect = 0.78
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 56 NQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRV 175
++ T+YVG LD VTE + LF Q G V + D +
Sbjct: 43 DEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDEL 82
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 332 VFIGNLDPEVDEKLLYDTFSAFGVIL 409
VFIG L +V E+ ++ TF AFG +L
Sbjct: 247 VFIGGLPIDVSEEQVWATFGAFGKVL 272
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +2
Query: 419 KVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYLCNRPISVSYA 559
K++ NSK AFI F + E + AA N + N + V YA
Sbjct: 665 KILHASGQPNSKKRAFITFGTVEDAQAAFAKSNGLKVNNHLVDVFYA 711
>L14745-15|AAA27917.1| 85|Caenorhabditis elegans Hypothetical
protein C02F5.2 protein.
Length = 85
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = +2
Query: 149 NVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVMNMIKLYGKPVRVNKASAHQKNLD 319
++ +P + Q Y E+ +D Y+ +++N+ K KP RVN SA +KN++
Sbjct: 16 SISLPPSSTGEALQNYTESEWNASDDP-YSAELLNVKK---KPNRVNVFSATEKNME 68
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 27.9 bits (59), Expect = 5.5
Identities = 21/84 (25%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
++V + R + L +F + G V +V + + + +G+GFV +DA+ A + +
Sbjct: 155 LHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNE--RGSKGFGFVTMERPQDAERARQEL 212
Query: 251 NMIKLYGKPVRVNKASA--HQKNL 316
+ + G+ + VN A+A H K +
Sbjct: 213 HGSMIEGRKIEVNCATARVHSKKV 236
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 27.9 bits (59), Expect = 5.5
Identities = 21/84 (25%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVM 250
++V + R + L +F + G V +V + + + +G+GFV +DA+ A + +
Sbjct: 155 LHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNE--RGSKGFGFVTMERPQDAERARQEL 212
Query: 251 NMIKLYGKPVRVNKASA--HQKNL 316
+ + G+ + VN A+A H K +
Sbjct: 213 HGSMIEGRKIEVNCATARVHSKKV 236
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 27.9 bits (59), Expect = 5.5
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = +2
Query: 50 ERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDA 229
E + +++G L + E L E+F + G + + + +D+ ++ +G FV F A
Sbjct: 137 ENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKS-RGCAFVTFTNRSCA 195
Query: 230 DYAIKVMN 253
A K M+
Sbjct: 196 VVATKEMH 203
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 27.9 bits (59), Expect = 5.5
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = +2
Query: 50 ERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDA 229
E + +++G L + E L E+F + G + + + +D+ ++ +G FV F A
Sbjct: 137 ENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKS-RGCAFVTFTNRSCA 195
Query: 230 DYAIKVMN 253
A K M+
Sbjct: 196 VVATKEMH 203
>AC024843-12|AAF60833.3| 986|Caenorhabditis elegans Hypothetical
protein Y61A9LA.10 protein.
Length = 986
Score = 27.9 bits (59), Expect = 5.5
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 191 GYGFVEFMGEEDADYAIKVMNMIKLYGKPVRVNKASAHQKNL 316
GY V G D D + +V+ +KL G P ++ K +A K +
Sbjct: 710 GYRIVATGGVLDLDKSTQVVKKLKLIGHPEKIFKKTAFVKGM 751
>Z93385-8|CAN86626.1| 560|Caenorhabditis elegans Hypothetical
protein M01E5.3c protein.
Length = 560
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +2
Query: 293 ASAHQKNLDVGANVF-IGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGN 448
A AHQ+ + N + + N P + ++ L FGV + P+V R+ + N
Sbjct: 433 AQAHQQQREPSWNNYAVANAPPAIIQRNLDAPAPMFGVAVNEPQVQRNGDDSN 485
>Z93385-7|CAN86625.1| 556|Caenorhabditis elegans Hypothetical
protein M01E5.3b protein.
Length = 556
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +2
Query: 293 ASAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGN 448
A AHQ+ + N F N P + ++ L FGV + P+V R+ + N
Sbjct: 433 AQAHQQQREPSWNNF-ANAPPAIIQRNLDAPAPMFGVAVNEPQVQRNGDDSN 483
>Z93385-6|CAB07641.1| 558|Caenorhabditis elegans Hypothetical
protein M01E5.3a protein.
Length = 558
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +2
Query: 293 ASAHQKNLDVGANVF-IGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGN 448
A AHQ+ + N + + N P + ++ L FGV + P+V R+ + N
Sbjct: 433 AQAHQQQREPSWNNYAVANAPPAIIQRNLDAPAPMFGVAVNEPQVQRNGDDSN 485
>Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical
protein F33C8.3 protein.
Length = 282
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1
Query: 384 VSYNNFSSTSGSKFPMNTFAPTSKFF*CADALFTLTGFPYSFIM 253
+SY N S S+ P+NT+A CADA++ S I+
Sbjct: 210 LSYPNNCGRSFSQAPLNTYAQFINTRGCADAVYESVSSSLSLIV 253
>AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical
protein C07H6.4 protein.
Length = 933
Score = 27.1 bits (57), Expect = 9.5
Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Frame = +2
Query: 329 NVFIGNLDPEVDEKLLYDTFSAFGVI--LQTPKVMRDPETGNSKAFAFINFASFEASDAA 502
NV++ N+ V E L TF +FG + L+ + E AF+ F S D
Sbjct: 201 NVYVSNIPHSVTEDDLLFTFGSFGPLAALKILYPRSEEERRRPHICAFVAFMSRADVDRF 260
Query: 503 IEAMNNQYLCNRPISVSYA 559
+ + + N PI ++A
Sbjct: 261 MAEVRVIIVRNEPIRFAFA 279
Score = 27.1 bits (57), Expect = 9.5
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +2
Query: 71 IYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQG---YGFVEFMGEEDADYAI 241
+YV + VTE L F GP+ + + R + + FV FM D D +
Sbjct: 202 VYVSNIPHSVTEDDLLFTFGSFGPLAALKILYPRSEEERRRPHICAFVAFMSRADVDRFM 261
Query: 242 KVMNMIKLYGKPVR 283
+ +I + +P+R
Sbjct: 262 AEVRVIIVRNEPIR 275
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,698,191
Number of Sequences: 27780
Number of extensions: 253690
Number of successful extensions: 928
Number of sequences better than 10.0: 111
Number of HSP's better than 10.0 without gapping: 761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 874
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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