Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11l19r
(719 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF560717-1|ABQ59027.1| 983|Homo sapiens PHC3 protein protein. 32 2.4
BC131772-1|AAI31773.1| 983|Homo sapiens PHC3 protein protein. 32 2.4
AJ320486-1|CAC86587.2| 983|Homo sapiens homolog of polyhomeotic... 32 2.4
AF444193-1|AAM51781.1| 983|Homo sapiens polyhomeotic 3 protein ... 32 2.4
BC125049-1|AAI25050.1| 401|Homo sapiens keratin associated prot... 31 3.1
BC125048-1|AAI25049.1| 401|Homo sapiens keratin associated prot... 31 3.1
BC074982-1|AAH74982.1| 159|Homo sapiens keratin associated prot... 28 3.6
BC074981-1|AAH74981.1| 159|Homo sapiens keratin associated prot... 28 3.6
AJ406950-1|CAC27589.1| 159|Homo sapiens keratin associated prot... 28 3.6
AY481573-1|AAS47698.1| 5202|Homo sapiens Usher syndrome 2A isofo... 31 4.1
AL513305-1|CAH73621.1| 5202|Homo sapiens Usher syndrome 2A (auto... 31 4.1
AL445650-4|CAH70621.1| 5202|Homo sapiens Usher syndrome 2A (auto... 31 4.1
AL358858-2|CAH71588.1| 5202|Homo sapiens Usher syndrome 2A (auto... 31 4.1
AL358452-1|CAI19189.1| 5202|Homo sapiens Usher syndrome 2A (auto... 31 4.1
AL139259-1|CAI23041.1| 5202|Homo sapiens Usher syndrome 2A (auto... 31 4.1
AF326592-1|AAL37371.1| 1171|Homo sapiens homeodomain interacting... 31 4.1
AF208291-1|AAG41236.1| 1198|Homo sapiens protein kinase HIPK2 pr... 31 4.1
BC074919-1|AAH74919.1| 159|Homo sapiens keratin associated prot... 28 4.6
BC074918-1|AAH74918.1| 159|Homo sapiens keratin associated prot... 28 4.6
AJ406947-1|CAC27586.1| 159|Homo sapiens keratin associated prot... 28 4.6
AK127139-1|BAC86847.1| 131|Homo sapiens protein ( Homo sapiens ... 31 5.5
AF207702-1|AAG35710.1| 911|Homo sapiens homeodomain-interacting... 31 5.5
AC005531-1|AAS00368.1| 292|Homo sapiens unknown protein. 31 5.5
AJ566387-1|CAD97467.1| 251|Homo sapiens keratin associated prot... 30 7.3
AB076358-1|BAD01545.1| 251|Homo sapiens keratin associated prot... 30 7.3
BC117287-1|AAI17288.1| 174|Homo sapiens keratin associated prot... 27 7.8
BC069560-1|AAH69560.1| 173|Homo sapiens KRTAP9-2 protein protein. 27 7.8
>EF560717-1|ABQ59027.1| 983|Homo sapiens PHC3 protein protein.
Length = 983
Score = 31.9 bits (69), Expect = 2.4
Identities = 21/79 (26%), Positives = 40/79 (50%)
Frame = +1
Query: 46 SGRPETSPSCPTALRSPEAFTIVSSSKASLNSRL*MKNRTSFSYLAGWKNHCSLVLSALL 225
SGRP TSP+ +S + T ++ S + ++L +++ S S +G +++L +
Sbjct: 105 SGRPSTSPTGSVTQQSSMSQTSINLSTSPTPAQLISRSQAS-SSTSGSITQQTMLLGSTS 163
Query: 226 PPYTTRSRALQLQVDVLIF 282
P T + L+ +LIF
Sbjct: 164 PTLTASQAQMYLRAQMLIF 182
>BC131772-1|AAI31773.1| 983|Homo sapiens PHC3 protein protein.
Length = 983
Score = 31.9 bits (69), Expect = 2.4
Identities = 21/79 (26%), Positives = 40/79 (50%)
Frame = +1
Query: 46 SGRPETSPSCPTALRSPEAFTIVSSSKASLNSRL*MKNRTSFSYLAGWKNHCSLVLSALL 225
SGRP TSP+ +S + T ++ S + ++L +++ S S +G +++L +
Sbjct: 105 SGRPSTSPTGSVTQQSSMSQTSINLSTSPTPAQLISRSQAS-SSTSGSITQQTMLLGSTS 163
Query: 226 PPYTTRSRALQLQVDVLIF 282
P T + L+ +LIF
Sbjct: 164 PTLTASQAQMYLRAQMLIF 182
>AJ320486-1|CAC86587.2| 983|Homo sapiens homolog of polyhomeotic 3
protein.
Length = 983
Score = 31.9 bits (69), Expect = 2.4
Identities = 21/79 (26%), Positives = 40/79 (50%)
Frame = +1
Query: 46 SGRPETSPSCPTALRSPEAFTIVSSSKASLNSRL*MKNRTSFSYLAGWKNHCSLVLSALL 225
SGRP TSP+ +S + T ++ S + ++L +++ S S +G +++L +
Sbjct: 105 SGRPSTSPTGSVTQQSSMSQTSINLSTSPTPAQLISRSQAS-SSTSGSITQQTMLLGSTS 163
Query: 226 PPYTTRSRALQLQVDVLIF 282
P T + L+ +LIF
Sbjct: 164 PTLTASQAQMYLRAQMLIF 182
>AF444193-1|AAM51781.1| 983|Homo sapiens polyhomeotic 3 protein
protein.
Length = 983
Score = 31.9 bits (69), Expect = 2.4
Identities = 21/79 (26%), Positives = 40/79 (50%)
Frame = +1
Query: 46 SGRPETSPSCPTALRSPEAFTIVSSSKASLNSRL*MKNRTSFSYLAGWKNHCSLVLSALL 225
SGRP TSP+ +S + T ++ S + ++L +++ S S +G +++L +
Sbjct: 105 SGRPSTSPTGSVTQQSSMSQTSINLSTSPTPAQLISRSQAS-SSTSGSITQQTMLLGSTS 163
Query: 226 PPYTTRSRALQLQVDVLIF 282
P T + L+ +LIF
Sbjct: 164 PTLTASQAQMYLRAQMLIF 182
>BC125049-1|AAI25050.1| 401|Homo sapiens keratin associated protein
10-4 protein.
Length = 401
Score = 31.5 bits (68), Expect = 3.1
Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Frame = +2
Query: 539 CRPTACSSTPWCSVSCQ*SDC*LHFERCCPGLGSRIPSSYVQHCRXH--R*XCCCTVC 706
C P +C S+P C V+C+ S C C + S + C + CC VC
Sbjct: 57 CTPVSCVSSPCCPVTCEPSPCQSGCTSSCTPSCCQQSSCQLACCASSPCQQACCVPVC 114
>BC125048-1|AAI25049.1| 401|Homo sapiens keratin associated protein
10-4 protein.
Length = 401
Score = 31.5 bits (68), Expect = 3.1
Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Frame = +2
Query: 539 CRPTACSSTPWCSVSCQ*SDC*LHFERCCPGLGSRIPSSYVQHCRXH--R*XCCCTVC 706
C P +C S+P C V+C+ S C C + S + C + CC VC
Sbjct: 57 CTPVSCVSSPCCPVTCEPSPCQSGCTSSCTPSCCQQSSCQLACCASSPCQQACCVPVC 114
>BC074982-1|AAH74982.1| 159|Homo sapiens keratin associated protein
9-8 protein.
Length = 159
Score = 28.3 bits (60), Expect(2) = 3.6
Identities = 20/55 (36%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Frame = +2
Query: 548 TACSSTPWCSVSCQ*SDC*LHFER--CCPGLGSRIPSSYVQHCRXHR*XCCCTVC 706
T CSSTP C SC S C R CC + P C+ CC T C
Sbjct: 25 TTCSSTPCCQPSCCVSSCCQPCCRPTCCQNTCCQ-PICVTSCCQP---SCCSTPC 75
Score = 21.8 bits (44), Expect(2) = 3.6
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +2
Query: 539 CRPTACSSTPW 571
C+PT C +T W
Sbjct: 9 CQPTCCRTTCW 19
>BC074981-1|AAH74981.1| 159|Homo sapiens keratin associated protein
9-8 protein.
Length = 159
Score = 28.3 bits (60), Expect(2) = 3.6
Identities = 20/55 (36%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Frame = +2
Query: 548 TACSSTPWCSVSCQ*SDC*LHFER--CCPGLGSRIPSSYVQHCRXHR*XCCCTVC 706
T CSSTP C SC S C R CC + P C+ CC T C
Sbjct: 25 TTCSSTPCCQPSCCVSSCCQPCCRPTCCQNTCCQ-PICVTSCCQP---SCCSTPC 75
Score = 21.8 bits (44), Expect(2) = 3.6
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +2
Query: 539 CRPTACSSTPW 571
C+PT C +T W
Sbjct: 9 CQPTCCRTTCW 19
>AJ406950-1|CAC27589.1| 159|Homo sapiens keratin associated protein
9.8 protein.
Length = 159
Score = 28.3 bits (60), Expect(2) = 3.6
Identities = 20/55 (36%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Frame = +2
Query: 548 TACSSTPWCSVSCQ*SDC*LHFER--CCPGLGSRIPSSYVQHCRXHR*XCCCTVC 706
T CSSTP C SC S C R CC + P C+ CC T C
Sbjct: 25 TTCSSTPCCQPSCCVSSCCQPCCRPTCCQNTCCQ-PICVTSCCQP---SCCSTPC 75
Score = 21.8 bits (44), Expect(2) = 3.6
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +2
Query: 539 CRPTACSSTPW 571
C+PT C +T W
Sbjct: 9 CQPTCCRTTCW 19
>AY481573-1|AAS47698.1| 5202|Homo sapiens Usher syndrome 2A isoform B
protein.
Length = 5202
Score = 31.1 bits (67), Expect = 4.1
Identities = 19/88 (21%), Positives = 39/88 (44%)
Frame = -1
Query: 458 RNYNLALKLGSTTNPSNERIAYGDGVDKHTELVSWKFITLWENNRVYFKAHNTKYNQYLK 279
++ ++ L NP+ + I Y + + + E +W T+ + ++ F +NT+ N ++
Sbjct: 4167 KSTSVELSWSEPVNPNGKIIRY-EVIRRCFEGKAWGNQTIQADEKIVFTEYNTERNTFMY 4225
Query: 278 MSTSTCNCNARDRVVYGGNSADSTREQW 195
T + +Y NSA T W
Sbjct: 4226 NDTGLQPWTQCEYKIYTWNSAGHTCSSW 4253
>AL513305-1|CAH73621.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 31.1 bits (67), Expect = 4.1
Identities = 19/88 (21%), Positives = 39/88 (44%)
Frame = -1
Query: 458 RNYNLALKLGSTTNPSNERIAYGDGVDKHTELVSWKFITLWENNRVYFKAHNTKYNQYLK 279
++ ++ L NP+ + I Y + + + E +W T+ + ++ F +NT+ N ++
Sbjct: 4167 KSTSVELSWSEPVNPNGKIIRY-EVIRRCFEGKAWGNQTIQADEKIVFTEYNTERNTFMY 4225
Query: 278 MSTSTCNCNARDRVVYGGNSADSTREQW 195
T + +Y NSA T W
Sbjct: 4226 NDTGLQPWTQCEYKIYTWNSAGHTCSSW 4253
>AL445650-4|CAH70621.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 31.1 bits (67), Expect = 4.1
Identities = 19/88 (21%), Positives = 39/88 (44%)
Frame = -1
Query: 458 RNYNLALKLGSTTNPSNERIAYGDGVDKHTELVSWKFITLWENNRVYFKAHNTKYNQYLK 279
++ ++ L NP+ + I Y + + + E +W T+ + ++ F +NT+ N ++
Sbjct: 4167 KSTSVELSWSEPVNPNGKIIRY-EVIRRCFEGKAWGNQTIQADEKIVFTEYNTERNTFMY 4225
Query: 278 MSTSTCNCNARDRVVYGGNSADSTREQW 195
T + +Y NSA T W
Sbjct: 4226 NDTGLQPWTQCEYKIYTWNSAGHTCSSW 4253
>AL358858-2|CAH71588.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 31.1 bits (67), Expect = 4.1
Identities = 19/88 (21%), Positives = 39/88 (44%)
Frame = -1
Query: 458 RNYNLALKLGSTTNPSNERIAYGDGVDKHTELVSWKFITLWENNRVYFKAHNTKYNQYLK 279
++ ++ L NP+ + I Y + + + E +W T+ + ++ F +NT+ N ++
Sbjct: 4167 KSTSVELSWSEPVNPNGKIIRY-EVIRRCFEGKAWGNQTIQADEKIVFTEYNTERNTFMY 4225
Query: 278 MSTSTCNCNARDRVVYGGNSADSTREQW 195
T + +Y NSA T W
Sbjct: 4226 NDTGLQPWTQCEYKIYTWNSAGHTCSSW 4253
>AL358452-1|CAI19189.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 31.1 bits (67), Expect = 4.1
Identities = 19/88 (21%), Positives = 39/88 (44%)
Frame = -1
Query: 458 RNYNLALKLGSTTNPSNERIAYGDGVDKHTELVSWKFITLWENNRVYFKAHNTKYNQYLK 279
++ ++ L NP+ + I Y + + + E +W T+ + ++ F +NT+ N ++
Sbjct: 4167 KSTSVELSWSEPVNPNGKIIRY-EVIRRCFEGKAWGNQTIQADEKIVFTEYNTERNTFMY 4225
Query: 278 MSTSTCNCNARDRVVYGGNSADSTREQW 195
T + +Y NSA T W
Sbjct: 4226 NDTGLQPWTQCEYKIYTWNSAGHTCSSW 4253
>AL139259-1|CAI23041.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 31.1 bits (67), Expect = 4.1
Identities = 19/88 (21%), Positives = 39/88 (44%)
Frame = -1
Query: 458 RNYNLALKLGSTTNPSNERIAYGDGVDKHTELVSWKFITLWENNRVYFKAHNTKYNQYLK 279
++ ++ L NP+ + I Y + + + E +W T+ + ++ F +NT+ N ++
Sbjct: 4167 KSTSVELSWSEPVNPNGKIIRY-EVIRRCFEGKAWGNQTIQADEKIVFTEYNTERNTFMY 4225
Query: 278 MSTSTCNCNARDRVVYGGNSADSTREQW 195
T + +Y NSA T W
Sbjct: 4226 NDTGLQPWTQCEYKIYTWNSAGHTCSSW 4253
>AF326592-1|AAL37371.1| 1171|Homo sapiens homeodomain interacting
protein kinase 2 protein.
Length = 1171
Score = 31.1 bits (67), Expect = 4.1
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +1
Query: 34 TK*ISGRPETSPSCPTALRSPEAFTIVSSSKASLNSRL*MKNRTSFSYLAGWKNHCS-LV 210
T +S + + SC T SP + + ++S S+ R N +F +NHC+
Sbjct: 878 TSTVSKQRKNVISCVTVHDSPYSDSSSNTSPYSVQQRAGHNNANAFDTKGSLENHCTGNP 937
Query: 211 LSALLPPYTTRSRALQLQVDVLI 279
+ ++PP T++ + ++ D L+
Sbjct: 938 RTIIVPPLKTQASEVLVECDSLV 960
>AF208291-1|AAG41236.1| 1198|Homo sapiens protein kinase HIPK2
protein.
Length = 1198
Score = 31.1 bits (67), Expect = 4.1
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +1
Query: 34 TK*ISGRPETSPSCPTALRSPEAFTIVSSSKASLNSRL*MKNRTSFSYLAGWKNHCS-LV 210
T +S + + SC T SP + + ++S S+ R N +F +NHC+
Sbjct: 905 TSTVSKQRKNVISCVTVHDSPYSDSSSNTSPYSVQQRAGHNNANAFDTKGSLENHCTGNP 964
Query: 211 LSALLPPYTTRSRALQLQVDVLI 279
+ ++PP T++ + ++ D L+
Sbjct: 965 RTIIVPPLKTQASEVLVECDSLV 987
>BC074919-1|AAH74919.1| 159|Homo sapiens keratin associated protein
9-3 protein.
Length = 159
Score = 27.9 bits (59), Expect(2) = 4.6
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 548 TACSSTPWCSVSCQ*SDC*LHFERCC 625
T CSSTP C SC S C + CC
Sbjct: 25 TTCSSTPCCQPSCCVSSC---CQPCC 47
Score = 21.8 bits (44), Expect(2) = 4.6
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +2
Query: 539 CRPTACSSTPW 571
C+PT C +T W
Sbjct: 9 CQPTCCRTTCW 19
>BC074918-1|AAH74918.1| 159|Homo sapiens keratin associated protein
9-3 protein.
Length = 159
Score = 27.9 bits (59), Expect(2) = 4.6
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 548 TACSSTPWCSVSCQ*SDC*LHFERCC 625
T CSSTP C SC S C + CC
Sbjct: 25 TTCSSTPCCQPSCCVSSC---CQPCC 47
Score = 21.8 bits (44), Expect(2) = 4.6
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +2
Query: 539 CRPTACSSTPW 571
C+PT C +T W
Sbjct: 9 CQPTCCRTTCW 19
>AJ406947-1|CAC27586.1| 159|Homo sapiens keratin associated protein
9.3 protein.
Length = 159
Score = 27.9 bits (59), Expect(2) = 4.6
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 548 TACSSTPWCSVSCQ*SDC*LHFERCC 625
T CSSTP C SC S C + CC
Sbjct: 25 TTCSSTPCCQPSCCVSSC---CQPCC 47
Score = 21.8 bits (44), Expect(2) = 4.6
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +2
Query: 539 CRPTACSSTPW 571
C+PT C +T W
Sbjct: 9 CQPTCCRTTCW 19
>AK127139-1|BAC86847.1| 131|Homo sapiens protein ( Homo sapiens
cDNA FLJ45196 fis, clone BRCAN2002662. ).
Length = 131
Score = 30.7 bits (66), Expect = 5.5
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Frame = -1
Query: 602 NNLIIDKRRNTMEYCYKLWVGNGQDIVKKYFPLSFRLIMAGNYV-----KLIYRNYNLAL 438
N+ I D N ME C+ W G I+ + + LI+ G Y+ L+ R AL
Sbjct: 58 NSGINDPFTNLMEKCFSRWEGLMSSILTSFAVIIGVLILVGYYIVFCAQGLVQRLIETAL 117
Query: 437 KLGSTTNPS 411
S T+PS
Sbjct: 118 TKTSPTSPS 126
>AF207702-1|AAG35710.1| 911|Homo sapiens homeodomain-interacting
protein kinase 2 protein.
Length = 911
Score = 30.7 bits (66), Expect = 5.5
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +1
Query: 70 SCPTALRSPEAFTIVSSSKASLNSRL*MKNRTSFSYLAGWKNHCS-LVLSALLPPYTTRS 246
SC T SP + + ++S S+ R N +F +NHC+ + ++PP T++
Sbjct: 810 SCVTVHDSPYSDSSSNTSPYSVQQRAGHNNANAFDTKGSLENHCTGNPRTIIVPPLKTQA 869
Query: 247 RALQLQVDVLI 279
+ ++ D L+
Sbjct: 870 SEVLVECDSLV 880
>AC005531-1|AAS00368.1| 292|Homo sapiens unknown protein.
Length = 292
Score = 30.7 bits (66), Expect = 5.5
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +1
Query: 70 SCPTALRSPEAFTIVSSSKASLNSRL*MKNRTSFSYLAGWKNHCS-LVLSALLPPYTTRS 246
SC T SP + + ++S S+ R N +F +NHC+ + ++PP T++
Sbjct: 11 SCVTVHDSPYSDSSSNTSPYSVQQRAGHNNANAFDTKGSLENHCTGNPRTIIVPPLKTQA 70
Query: 247 RALQLQVDVLI 279
+ ++ D L+
Sbjct: 71 SEVLVECDSLV 81
>AJ566387-1|CAD97467.1| 251|Homo sapiens keratin associated protein
KAP10.10 protein.
Length = 251
Score = 30.3 bits (65), Expect = 7.3
Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Frame = +2
Query: 539 CRPTACSSTPWCSVSCQ*SDC*LHFERCCPGLGSRIPSSYVQHCRXH--R*XCCCTVC 706
C P +C S+P C +C+ S C + C + S C + CC VC
Sbjct: 42 CTPVSCVSSPCCQTACEPSACQSGYTSSCTTPCYQQSSCQPDCCTSSPCQQACCVPVC 99
>AB076358-1|BAD01545.1| 251|Homo sapiens keratin associated protein
protein.
Length = 251
Score = 30.3 bits (65), Expect = 7.3
Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Frame = +2
Query: 539 CRPTACSSTPWCSVSCQ*SDC*LHFERCCPGLGSRIPSSYVQHCRXH--R*XCCCTVC 706
C P +C S+P C +C+ S C + C + S C + CC VC
Sbjct: 42 CTPVSCVSSPCCQTACEPSACQSGYTSSCTTPCYQQSSCQPDCCTSSPCQQACCVPVC 99
>BC117287-1|AAI17288.1| 174|Homo sapiens keratin associated protein
9-2 protein.
Length = 174
Score = 27.1 bits (57), Expect(2) = 7.8
Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 6/59 (10%)
Frame = +2
Query: 548 TACSSTPWCSVSCQ*SDC*LHFER--CCPGLGSRI----PSSYVQHCRXHR*XCCCTVC 706
T CSSTP C +C S C R CC R P+ C+ CC T C
Sbjct: 30 TTCSSTPCCQPACCVSSCCQPCCRPTCCQNTCCRTTCCQPTCVTSCCQP---SCCSTPC 85
Score = 21.8 bits (44), Expect(2) = 7.8
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +2
Query: 530 PVRCRPTACSSTPW 571
P CR T C +T W
Sbjct: 11 PTCCRTTCCRTTCW 24
>BC069560-1|AAH69560.1| 173|Homo sapiens KRTAP9-2 protein protein.
Length = 173
Score = 27.1 bits (57), Expect(2) = 7.8
Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 6/59 (10%)
Frame = +2
Query: 548 TACSSTPWCSVSCQ*SDC*LHFER--CCPGLGSRI----PSSYVQHCRXHR*XCCCTVC 706
T CSSTP C +C S C R CC R P+ C+ CC T C
Sbjct: 29 TTCSSTPCCQPACCVSSCCQPCCRPTCCQNTCCRTTCCQPTCVTSCCQP---SCCSTPC 84
Score = 21.8 bits (44), Expect(2) = 7.8
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +2
Query: 530 PVRCRPTACSSTPW 571
P CR T C +T W
Sbjct: 10 PTCCRTTCCRTTCW 23
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,138,508
Number of Sequences: 237096
Number of extensions: 1966025
Number of successful extensions: 4043
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 3699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4032
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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