Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11l18r
(675 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB051502-1|BAB21806.1| 429|Homo sapiens KIAA1715 protein protein. 80 8e-15
BC105134-1|AAI05135.1| 428|Homo sapiens Lunapark protein. 78 3e-14
BC105132-1|AAI05133.1| 428|Homo sapiens KIAA1715 protein. 78 3e-14
AK056532-1|BAB71207.1| 423|Homo sapiens protein ( Homo sapiens ... 69 2e-11
Y12394-1|CAA73026.1| 521|Homo sapiens SRP1-like protein protein. 31 3.7
D89618-1|BAA20378.1| 521|Homo sapiens karyopherin alhph 3 protein. 31 3.7
BC035090-1|AAH35090.1| 521|Homo sapiens karyopherin alpha 3 (im... 31 3.7
BC024202-1|AAH24202.1| 521|Homo sapiens karyopherin alpha 3 (im... 31 3.7
BC017355-1|AAH17355.1| 521|Homo sapiens karyopherin alpha 3 (im... 31 3.7
AL136301-1|CAH71145.1| 521|Homo sapiens karyopherin alpha 3 (im... 31 3.7
AL135901-9|CAI40722.1| 90|Homo sapiens karyopherin alpha 3 (im... 31 3.7
AL135901-3|CAI40716.1| 521|Homo sapiens karyopherin alpha 3 (im... 31 3.7
AK223480-1|BAD97200.1| 521|Homo sapiens karyopherin alpha 3 var... 31 3.7
AF034756-1|AAB87693.1| 521|Homo sapiens importin-alpha homolog ... 31 3.7
AF005263-1|AAQ13404.1| 521|Homo sapiens importin alpha-3 subuni... 31 3.7
>AB051502-1|BAB21806.1| 429|Homo sapiens KIAA1715 protein protein.
Length = 429
Score = 79.8 bits (188), Expect = 8e-15
Identities = 43/154 (27%), Positives = 80/154 (51%)
Frame = -3
Query: 556 KMGLIISRFRRKXTTTEILERLENDIKSIERDGQYKEQTHKRVIGYVMAYSVGLYVLFAV 377
KMG + SR+R K +T E+LE ++ +I+++E + ++ K +G ++ YS LY+ +
Sbjct: 1 KMGGLFSRWRTKPSTVEVLESIDKEIQALEEFREKNQRLQKLWVGRLILYSSVLYLFTCL 60
Query: 376 LYYYMYVGRSQYWXXXXXXXXXXXXXXXXXXXLRSSISWYYNWMINKNRMKLSKMREDKK 197
+ Y Y+ + +R+ I ++++ +N L ++ +K
Sbjct: 61 IVYLWYL--PDEFTARLAMTLPFFAFPLIIWSIRTVIIFFFSKRTERNNEALDDLKSQRK 118
Query: 196 KILEEVMNTETYKVAKEILDKYGSPDDQSKSLKP 95
KILEEVM ETYK AK IL+++ ++K +P
Sbjct: 119 KILEEVMEKETYKTAKLILERFDPDSKKAKECEP 152
>BC105134-1|AAI05135.1| 428|Homo sapiens Lunapark protein.
Length = 428
Score = 77.8 bits (183), Expect = 3e-14
Identities = 42/153 (27%), Positives = 79/153 (51%)
Frame = -3
Query: 553 MGLIISRFRRKXTTTEILERLENDIKSIERDGQYKEQTHKRVIGYVMAYSVGLYVLFAVL 374
MG + SR+R K +T E+LE ++ +I+++E + ++ K +G ++ YS LY+ ++
Sbjct: 1 MGGLFSRWRTKPSTVEVLESIDKEIQALEEFREKNQRLQKLWVGRLILYSSVLYLFTCLI 60
Query: 373 YYYMYVGRSQYWXXXXXXXXXXXXXXXXXXXLRSSISWYYNWMINKNRMKLSKMREDKKK 194
Y Y+ + +R+ I ++++ +N L ++ +KK
Sbjct: 61 VYLWYL--PDEFTARLAMTLPFFAFPLIIWSIRTVIIFFFSKRTERNNEALDDLKSQRKK 118
Query: 193 ILEEVMNTETYKVAKEILDKYGSPDDQSKSLKP 95
ILEEVM ETYK AK IL+++ ++K +P
Sbjct: 119 ILEEVMEKETYKTAKLILERFDPDSKKAKECEP 151
>BC105132-1|AAI05133.1| 428|Homo sapiens KIAA1715 protein.
Length = 428
Score = 77.8 bits (183), Expect = 3e-14
Identities = 42/153 (27%), Positives = 79/153 (51%)
Frame = -3
Query: 553 MGLIISRFRRKXTTTEILERLENDIKSIERDGQYKEQTHKRVIGYVMAYSVGLYVLFAVL 374
MG + SR+R K +T E+LE ++ +I+++E + ++ K +G ++ YS LY+ ++
Sbjct: 1 MGGLFSRWRTKPSTVEVLESIDKEIQALEEFREKNQRLQKLWVGRLILYSSVLYLFTCLI 60
Query: 373 YYYMYVGRSQYWXXXXXXXXXXXXXXXXXXXLRSSISWYYNWMINKNRMKLSKMREDKKK 194
Y Y+ + +R+ I ++++ +N L ++ +KK
Sbjct: 61 VYLWYL--PDEFTARLAMTLPFFAFPLIIWSIRTVIIFFFSKRTERNNEALDDLKSQRKK 118
Query: 193 ILEEVMNTETYKVAKEILDKYGSPDDQSKSLKP 95
ILEEVM ETYK AK IL+++ ++K +P
Sbjct: 119 ILEEVMEKETYKTAKLILERFDPDSKKAKECEP 151
>AK056532-1|BAB71207.1| 423|Homo sapiens protein ( Homo sapiens
cDNA FLJ31970 fis, clone NT2RP7008133. ).
Length = 423
Score = 68.9 bits (161), Expect = 2e-11
Identities = 37/145 (25%), Positives = 73/145 (50%)
Frame = -3
Query: 529 RRKXTTTEILERLENDIKSIERDGQYKEQTHKRVIGYVMAYSVGLYVLFAVLYYYMYVGR 350
+ K +T E+LE ++ +I+++E + ++ K +G ++ YS LY+ ++ Y Y+
Sbjct: 4 KTKPSTVEVLESIDKEIQALEEFREKNQRLQKLWVGRLILYSSVLYLFTCLIVYLWYL-- 61
Query: 349 SQYWXXXXXXXXXXXXXXXXXXXLRSSISWYYNWMINKNRMKLSKMREDKKKILEEVMNT 170
+ +R+ I ++++ +N L ++ +KKILEEVM
Sbjct: 62 PDEFTARLAMTLPFFAFPLIIWSIRTVIIFFFSKRTERNNEALDDLKSQRKKILEEVMEK 121
Query: 169 ETYKVAKEILDKYGSPDDQSKSLKP 95
ETYK AK IL+++ ++K +P
Sbjct: 122 ETYKTAKLILERFDPDSKKAKECEP 146
>Y12394-1|CAA73026.1| 521|Homo sapiens SRP1-like protein protein.
Length = 521
Score = 31.1 bits (67), Expect = 3.7
Identities = 13/30 (43%), Positives = 22/30 (73%)
Frame = -3
Query: 205 DKKKILEEVMNTETYKVAKEILDKYGSPDD 116
+K ++L++ N + YK+A EI+D+Y S DD
Sbjct: 460 EKIEVLQQHENEDIYKLAFEIIDQYFSGDD 489
>D89618-1|BAA20378.1| 521|Homo sapiens karyopherin alhph 3 protein.
Length = 521
Score = 31.1 bits (67), Expect = 3.7
Identities = 13/30 (43%), Positives = 22/30 (73%)
Frame = -3
Query: 205 DKKKILEEVMNTETYKVAKEILDKYGSPDD 116
+K ++L++ N + YK+A EI+D+Y S DD
Sbjct: 460 EKIEVLQQHENEDIYKLAFEIIDQYFSGDD 489
>BC035090-1|AAH35090.1| 521|Homo sapiens karyopherin alpha 3
(importin alpha 4) protein.
Length = 521
Score = 31.1 bits (67), Expect = 3.7
Identities = 13/30 (43%), Positives = 22/30 (73%)
Frame = -3
Query: 205 DKKKILEEVMNTETYKVAKEILDKYGSPDD 116
+K ++L++ N + YK+A EI+D+Y S DD
Sbjct: 460 EKIEVLQQHENEDIYKLAFEIIDQYFSGDD 489
>BC024202-1|AAH24202.1| 521|Homo sapiens karyopherin alpha 3
(importin alpha 4) protein.
Length = 521
Score = 31.1 bits (67), Expect = 3.7
Identities = 13/30 (43%), Positives = 22/30 (73%)
Frame = -3
Query: 205 DKKKILEEVMNTETYKVAKEILDKYGSPDD 116
+K ++L++ N + YK+A EI+D+Y S DD
Sbjct: 460 EKIEVLQQHENEDIYKLAFEIIDQYFSGDD 489
>BC017355-1|AAH17355.1| 521|Homo sapiens karyopherin alpha 3
(importin alpha 4) protein.
Length = 521
Score = 31.1 bits (67), Expect = 3.7
Identities = 13/30 (43%), Positives = 22/30 (73%)
Frame = -3
Query: 205 DKKKILEEVMNTETYKVAKEILDKYGSPDD 116
+K ++L++ N + YK+A EI+D+Y S DD
Sbjct: 460 EKIEVLQQHENEDIYKLAFEIIDQYFSGDD 489
>AL136301-1|CAH71145.1| 521|Homo sapiens karyopherin alpha 3
(importin alpha 4) protein.
Length = 521
Score = 31.1 bits (67), Expect = 3.7
Identities = 13/30 (43%), Positives = 22/30 (73%)
Frame = -3
Query: 205 DKKKILEEVMNTETYKVAKEILDKYGSPDD 116
+K ++L++ N + YK+A EI+D+Y S DD
Sbjct: 460 EKIEVLQQHENEDIYKLAFEIIDQYFSGDD 489
>AL135901-9|CAI40722.1| 90|Homo sapiens karyopherin alpha 3
(importin alpha 4) protein.
Length = 90
Score = 31.1 bits (67), Expect = 3.7
Identities = 13/30 (43%), Positives = 22/30 (73%)
Frame = -3
Query: 205 DKKKILEEVMNTETYKVAKEILDKYGSPDD 116
+K ++L++ N + YK+A EI+D+Y S DD
Sbjct: 46 EKIEVLQQHENEDIYKLAFEIIDQYFSGDD 75
>AL135901-3|CAI40716.1| 521|Homo sapiens karyopherin alpha 3
(importin alpha 4) protein.
Length = 521
Score = 31.1 bits (67), Expect = 3.7
Identities = 13/30 (43%), Positives = 22/30 (73%)
Frame = -3
Query: 205 DKKKILEEVMNTETYKVAKEILDKYGSPDD 116
+K ++L++ N + YK+A EI+D+Y S DD
Sbjct: 460 EKIEVLQQHENEDIYKLAFEIIDQYFSGDD 489
>AK223480-1|BAD97200.1| 521|Homo sapiens karyopherin alpha 3
variant protein.
Length = 521
Score = 31.1 bits (67), Expect = 3.7
Identities = 13/30 (43%), Positives = 22/30 (73%)
Frame = -3
Query: 205 DKKKILEEVMNTETYKVAKEILDKYGSPDD 116
+K ++L++ N + YK+A EI+D+Y S DD
Sbjct: 460 EKIEVLQQHENEDIYKLAFEIIDQYFSGDD 489
>AF034756-1|AAB87693.1| 521|Homo sapiens importin-alpha homolog
protein.
Length = 521
Score = 31.1 bits (67), Expect = 3.7
Identities = 13/30 (43%), Positives = 22/30 (73%)
Frame = -3
Query: 205 DKKKILEEVMNTETYKVAKEILDKYGSPDD 116
+K ++L++ N + YK+A EI+D+Y S DD
Sbjct: 460 EKIEVLQQHENEDIYKLAFEIIDQYFSGDD 489
>AF005263-1|AAQ13404.1| 521|Homo sapiens importin alpha-3 subunit
protein.
Length = 521
Score = 31.1 bits (67), Expect = 3.7
Identities = 13/30 (43%), Positives = 22/30 (73%)
Frame = -3
Query: 205 DKKKILEEVMNTETYKVAKEILDKYGSPDD 116
+K ++L++ N + YK+A EI+D+Y S DD
Sbjct: 460 EKIEVLQQHENEDIYKLAFEIIDQYFSGDD 489
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,641,780
Number of Sequences: 237096
Number of extensions: 1624290
Number of successful extensions: 4442
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4431
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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