Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11l18f
(613 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 1.2
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 23 1.8
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 2.0
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 2.0
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 2.0
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 2.0
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 2.2
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 2.2
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 2.2
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 2.2
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 23 3.1
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 5.4
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 21 7.2
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 21 7.2
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 21 9.5
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect(2) = 1.2
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -1
Query: 475 NNTYRPTEYAITY 437
NN Y+P Y I Y
Sbjct: 328 NNNYKPLHYNINY 340
Score = 20.6 bits (41), Expect(2) = 1.2
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -1
Query: 577 EYHKHGQTSK 548
EY K+G+TSK
Sbjct: 288 EYRKYGETSK 297
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 23.4 bits (48), Expect = 1.8
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -2
Query: 519 NTDSSPRTCSSKGPQITRIDP 457
N +SP TC +K T+I P
Sbjct: 17 NATNSPHTCRTKNGDYTKIMP 37
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.6 bits (41), Expect(2) = 2.0
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -1
Query: 577 EYHKHGQTSK 548
EY K+G+TSK
Sbjct: 288 EYRKYGETSK 297
Score = 20.6 bits (41), Expect(2) = 2.0
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -1
Query: 475 NNTYRPTEYAITY 437
NN Y+P Y I Y
Sbjct: 328 NNNYKPLYYNINY 340
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.6 bits (41), Expect(2) = 2.0
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -1
Query: 577 EYHKHGQTSK 548
EY K+G+TSK
Sbjct: 288 EYRKYGETSK 297
Score = 20.6 bits (41), Expect(2) = 2.0
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -1
Query: 475 NNTYRPTEYAITY 437
NN Y+P Y I Y
Sbjct: 328 NNNYKPLYYNINY 340
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.6 bits (41), Expect(2) = 2.0
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -1
Query: 577 EYHKHGQTSK 548
EY K+G+TSK
Sbjct: 288 EYRKYGETSK 297
Score = 20.6 bits (41), Expect(2) = 2.0
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -1
Query: 475 NNTYRPTEYAITY 437
NN Y+P Y I Y
Sbjct: 328 NNNYKPLYYNINY 340
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 20.6 bits (41), Expect(2) = 2.0
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -1
Query: 577 EYHKHGQTSK 548
EY K+G+TSK
Sbjct: 277 EYRKYGETSK 286
Score = 20.6 bits (41), Expect(2) = 2.0
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -1
Query: 475 NNTYRPTEYAITY 437
NN Y+P Y I Y
Sbjct: 317 NNNYKPLYYNINY 329
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 20.6 bits (41), Expect(2) = 2.2
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -1
Query: 577 EYHKHGQTSK 548
EY K+G+TSK
Sbjct: 55 EYRKYGETSK 64
Score = 20.6 bits (41), Expect(2) = 2.2
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -1
Query: 475 NNTYRPTEYAITY 437
NN Y+P Y I Y
Sbjct: 95 NNNYKPLYYNINY 107
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 20.6 bits (41), Expect(2) = 2.2
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -1
Query: 577 EYHKHGQTSK 548
EY K+G+TSK
Sbjct: 55 EYRKYGETSK 64
Score = 20.6 bits (41), Expect(2) = 2.2
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -1
Query: 475 NNTYRPTEYAITY 437
NN Y+P Y I Y
Sbjct: 95 NNNYKPLYYNINY 107
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 20.6 bits (41), Expect(2) = 2.2
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -1
Query: 577 EYHKHGQTSK 548
EY K+G+TSK
Sbjct: 55 EYRKYGETSK 64
Score = 20.6 bits (41), Expect(2) = 2.2
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -1
Query: 475 NNTYRPTEYAITY 437
NN Y+P Y I Y
Sbjct: 95 NNNYKPLYYNINY 107
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 20.6 bits (41), Expect(2) = 2.2
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -1
Query: 577 EYHKHGQTSK 548
EY K+G+TSK
Sbjct: 55 EYRKYGETSK 64
Score = 20.6 bits (41), Expect(2) = 2.2
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -1
Query: 475 NNTYRPTEYAITY 437
NN Y+P Y I Y
Sbjct: 95 NNNYKPLYYNINY 107
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 22.6 bits (46), Expect = 3.1
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 459 GLYVLFAVLYYYM 497
G+ VLF LYYY+
Sbjct: 10 GIAVLFLALYYYL 22
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.8 bits (44), Expect = 5.4
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 186 IISIYINSSP*LCASSIFSTGKLLNY 263
++ Y N + ASS+ ST +LNY
Sbjct: 293 LLGTYFNCIMFMVASSVVSTILILNY 318
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.4 bits (43), Expect = 7.2
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 201 YKLKL*PQPILVYIKLK 151
Y+++ QP+ VYI+LK
Sbjct: 291 YRMQQVEQPVQVYIQLK 307
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.4 bits (43), Expect = 7.2
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 201 YKLKL*PQPILVYIKLK 151
Y+++ QP+ VYI+LK
Sbjct: 291 YRMQQVEQPVQVYIQLK 307
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 21.0 bits (42), Expect = 9.5
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -3
Query: 542 GIQQRMQPILTPP 504
GI+ PILTPP
Sbjct: 426 GIRVERDPILTPP 438
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,509
Number of Sequences: 438
Number of extensions: 3319
Number of successful extensions: 28
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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