Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11l11f
(527 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 23 2.6
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 23 2.6
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 23 2.6
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 23 2.6
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 23 2.6
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 23 2.6
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 23 2.6
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 23 2.6
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 23 2.6
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 23 2.6
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 23 2.6
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 22 3.4
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 22 3.4
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 5.9
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 21 7.8
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 21 7.8
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 21 7.8
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 7.8
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 7.8
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 7.8
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 7.8
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 21 7.8
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 7.8
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 7.8
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 7.8
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 7.8
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 7.8
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 7.8
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 7.8
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 2.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 456 PRVSMMAKRLRNSYNYNN 509
P++ L N+YNYNN
Sbjct: 79 PKIISNNNSLSNNYNYNN 96
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 456 PRVSMMAKRLRNSYNYNN 509
P++ L N+YNYNN
Sbjct: 79 PKIISNNNSLSNNYNYNN 96
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 456 PRVSMMAKRLRNSYNYNN 509
P++ L N+YNYNN
Sbjct: 79 PKIISNNNSLSNNYNYNN 96
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 456 PRVSMMAKRLRNSYNYNN 509
P++ L N+YNYNN
Sbjct: 79 PKIISNNNSLSNNYNYNN 96
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 456 PRVSMMAKRLRNSYNYNN 509
P++ L N+YNYNN
Sbjct: 79 PKIISNNNSLSNNYNYNN 96
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 456 PRVSMMAKRLRNSYNYNN 509
P++ L N+YNYNN
Sbjct: 79 PKIISNNNSLSNNYNYNN 96
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 456 PRVSMMAKRLRNSYNYNN 509
P++ L N+YNYNN
Sbjct: 79 PKIISNNNSLSNNYNYNN 96
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 456 PRVSMMAKRLRNSYNYNN 509
P++ L N+YNYNN
Sbjct: 79 PKIISNNNSLSNNYNYNN 96
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 456 PRVSMMAKRLRNSYNYNN 509
P++ L N+YNYNN
Sbjct: 79 PKIISNNNSLSNNYNYNN 96
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.6 bits (46), Expect = 2.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 456 PRVSMMAKRLRNSYNYNN 509
P++ L N+YNYNN
Sbjct: 312 PKIISNNNSLSNNYNYNN 329
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.6 bits (46), Expect = 2.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 456 PRVSMMAKRLRNSYNYNN 509
P++ L N+YNYNN
Sbjct: 312 PKIISNNNSLSNNYNYNN 329
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.4
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 456 PRVSMMAKRLRNSYNYNN 509
P++ L N+YNYNN
Sbjct: 79 PKIISNNNPLSNNYNYNN 96
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 22.2 bits (45), Expect = 3.4
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +1
Query: 343 GDRRGCEPRYPGHPQPRRQSRL 408
G GC+ R P PR+Q L
Sbjct: 165 GSSDGCDARKKKGPTPRQQEEL 186
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.4 bits (43), Expect = 5.9
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -3
Query: 486 GDAWPSWRLSAXLAKELELD 427
GD W SW + EL LD
Sbjct: 385 GDLWISWEEGMKVFDELLLD 404
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 7.8
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3
Query: 483 LRNSYNYNN 509
L N+YNYNN
Sbjct: 85 LSNNYNYNN 93
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 7.8
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3
Query: 483 LRNSYNYNN 509
L N+YNYNN
Sbjct: 85 LSNNYNYNN 93
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 7.8
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3
Query: 483 LRNSYNYNN 509
L N+YNYNN
Sbjct: 85 LSNNYNYNN 93
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 7.8
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3
Query: 483 LRNSYNYNN 509
L N+YNYNN
Sbjct: 85 LSNNYNYNN 93
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 7.8
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3
Query: 483 LRNSYNYNN 509
L N+YNYNN
Sbjct: 85 LSNNYNYNN 93
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 7.8
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3
Query: 483 LRNSYNYNN 509
L N+YNYNN
Sbjct: 85 LSNNYNYNN 93
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 7.8
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3
Query: 483 LRNSYNYNN 509
L N+YNYNN
Sbjct: 85 LSNNYNYNN 93
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 21.0 bits (42), Expect = 7.8
Identities = 9/30 (30%), Positives = 13/30 (43%)
Frame = +3
Query: 417 PCYGQAPALWPAXPRVSMMAKRLRNSYNYN 506
PC + P + MAK +YNY+
Sbjct: 235 PCIFDNATIVNNGPEAAKMAKAFTYTYNYS 264
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.0 bits (42), Expect = 7.8
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3
Query: 483 LRNSYNYNN 509
L N+YNYNN
Sbjct: 318 LSNNYNYNN 326
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 7.8
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3
Query: 483 LRNSYNYNN 509
L N+YNYNN
Sbjct: 318 LSNNYNYNN 326
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 7.8
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3
Query: 483 LRNSYNYNN 509
L N+YNYNN
Sbjct: 318 LSNNYNYNN 326
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 7.8
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3
Query: 483 LRNSYNYNN 509
L N+YNYNN
Sbjct: 318 LSNNYNYNN 326
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 7.8
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3
Query: 483 LRNSYNYNN 509
L N+YNYNN
Sbjct: 318 LSNNYNYNN 326
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.0 bits (42), Expect = 7.8
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3
Query: 483 LRNSYNYNN 509
L N+YNYNN
Sbjct: 307 LSNNYNYNN 315
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.0 bits (42), Expect = 7.8
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3
Query: 483 LRNSYNYNN 509
L N+YNYNN
Sbjct: 318 LSNNYNYNN 326
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,089
Number of Sequences: 438
Number of extensions: 2643
Number of successful extensions: 30
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14845611
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -