Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11l03r
(724 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VN50 Cluster: CG9769-PA; n=8; Endopterygota|Rep: CG97... 239 7e-62
UniRef50_UPI00015B5EE3 Cluster: PREDICTED: similar to eukaryotic... 238 1e-61
UniRef50_O00303 Cluster: Eukaryotic translation initiation facto... 142 6e-33
UniRef50_A1Z6K7 Cluster: CG8335-PA; n=1; Drosophila melanogaster... 108 1e-22
UniRef50_Q5DDP2 Cluster: SJCHGC06192 protein; n=1; Schistosoma j... 87 5e-16
UniRef50_Q4PI88 Cluster: Putative uncharacterized protein; n=1; ... 82 1e-14
UniRef50_O04202 Cluster: Eukaryotic translation initiation facto... 77 4e-13
UniRef50_Q54C49 Cluster: Putative uncharacterized protein; n=1; ... 71 3e-11
UniRef50_Q6C4H1 Cluster: Similar to tr|Q9P748 Neurospora crassa ... 71 4e-11
UniRef50_A7AT42 Cluster: Mov34/MPN/PAD-1 family protein; n=3; Pi... 57 5e-07
UniRef50_O43060 Cluster: Translation initiation factor eIF3f; n=... 56 7e-07
UniRef50_Q5KER5 Cluster: Putative uncharacterized protein; n=1; ... 56 9e-07
UniRef50_A4RTI9 Cluster: Predicted protein; n=2; Ostreococcus|Re... 53 6e-06
UniRef50_Q8I323 Cluster: 26S proteasome regulatory subunit, puta... 48 3e-04
UniRef50_Q016I5 Cluster: Predicted ATP-dependent RNA helicase FA... 47 5e-04
UniRef50_A7ATP2 Cluster: 26S proteasome regulatory particle non-... 47 5e-04
UniRef50_Q5CJF2 Cluster: 26S proteasome regulatory particle non-... 44 0.004
UniRef50_A5K6P8 Cluster: Eukaryotic translation initiation facto... 43 0.007
UniRef50_A0CZC8 Cluster: Chromosome undetermined scaffold_32, wh... 43 0.009
UniRef50_Q4Q5P6 Cluster: Proteasome regulatory non-ATP-ase subun... 40 0.062
UniRef50_P51665 Cluster: 26S proteasome non-ATPase regulatory su... 39 0.14
UniRef50_UPI00015533C8 Cluster: PREDICTED: hypothetical protein;... 38 0.33
UniRef50_UPI0000498D3B Cluster: proteasome regulatory subunit; n... 37 0.58
UniRef50_Q54WI8 Cluster: 26S proteasome non-ATPase regulatory su... 37 0.58
UniRef50_A4M8A3 Cluster: Flagellar export protein FliJ precursor... 36 0.77
UniRef50_Q5AG96 Cluster: Potential translation initiation factor... 36 0.77
UniRef50_Q5W901 Cluster: Cytochrome c oxidase subunit 3; n=1; Li... 35 1.8
UniRef50_Q5CYT6 Cluster: EIF3-p47 with JAB/PAD domain; n=2; Cryp... 35 2.3
UniRef50_A2DP46 Cluster: Clan MP, family M67, Poh1-like metallop... 34 4.1
UniRef50_Q2MJW1 Cluster: COP9 signalosome subunit 6; n=1; Chlamy... 33 5.4
>UniRef50_Q9VN50 Cluster: CG9769-PA; n=8; Endopterygota|Rep:
CG9769-PA - Drosophila melanogaster (Fruit fly)
Length = 280
Score = 239 bits (584), Expect = 7e-62
Identities = 118/220 (53%), Positives = 144/220 (65%), Gaps = 2/220 (0%)
Frame = -3
Query: 722 HADQVEAELNYAMDVYELNRRVNSSESIVGXWATGNEVTNHSSVIHEYYSRECREPVHVT 543
H DQVEAEL+YA+D+Y+LNR+VNS+ES+VG WATGN+VTNHSSVIHEYY+REC PVH+T
Sbjct: 58 HDDQVEAELSYALDMYDLNRKVNSNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLT 117
Query: 542 LDTSLAGGRMGLRAYVCVPLGVPNGKQGCMFTPVDVTLTCYEPEIVGLQVCQKTXXXX-X 366
+DTSL GGRMGLRAYVC+ LGVP GK GCMFTP+ V LT YEPE GL++ QKT
Sbjct: 118 VDTSLQGGRMGLRAYVCIQLGVPGGKSGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPA 177
Query: 365 XXXXXXXXXSDLAQVMXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXALLQLAHSAPD 189
DLAQ+ LL L HS P
Sbjct: 178 HRPKTVPPMLDLAQISEASTKLQSLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPH 237
Query: 188 LAKDTFSDAFASSVKDLLMVVTLAQLIKTQLQLNEKLTLL 69
+ + F+ F ++V++LL+V+TL+QLIKTQLQLNEKLT L
Sbjct: 238 MTHEQFTQMFNANVRNLLLVITLSQLIKTQLQLNEKLTFL 277
>UniRef50_UPI00015B5EE3 Cluster: PREDICTED: similar to eukaryotic
translation initiation factor 3 subunit 5 epsilon-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to eukaryotic translation initiation factor 3
subunit 5 epsilon-like protein - Nasonia vitripennis
Length = 311
Score = 238 bits (582), Expect = 1e-61
Identities = 120/224 (53%), Positives = 144/224 (64%), Gaps = 4/224 (1%)
Frame = -3
Query: 722 HADQVEAELNYAMDVYELNRRVNSSESIVGXWATGNEVTNHSSVIHEYYSRECREPVHVT 543
+ DQV+AELNYAMD+YELNRRVN E+IVG WATGNEVTNHS VIHEYY+REC P+H+T
Sbjct: 57 YEDQVDAELNYAMDLYELNRRVNPQENIVGWWATGNEVTNHSFVIHEYYARECNNPIHLT 116
Query: 542 LDTSLAG-GRMGLRAYVCVPLGVPNGKQGCMFTPVDVTLTCYEPEIVGLQVCQKTXXXXX 366
+DT+L G RMG+RAYVCV LGVPNG GCMFTP V + CY+PE++GLQ+C KT
Sbjct: 117 VDTTLEGTTRMGIRAYVCVRLGVPNGNTGCMFTPAKVQVQCYDPEVIGLQLCAKTIAQAQ 176
Query: 365 XXXXXXXX--XSDLAQVMXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXALLQLAHSA 195
DLAQ+ ALL + +S
Sbjct: 177 SGKTSGIVEPMMDLAQIAEASSKLASMLDGVLQYVDDVLAGKTLPDNQVGRALLDMVNSV 236
Query: 194 PDLAKDTFSDAFASSVKDLLMVVTLAQLIKTQLQLNEKLTLLTS 63
P ++ D F + F S+VKDLLMVV L+QLIK QLQLNEKLTLLT+
Sbjct: 237 PKMSSDQFDNMFNSNVKDLLMVVALSQLIKVQLQLNEKLTLLTT 280
>UniRef50_O00303 Cluster: Eukaryotic translation initiation factor 3
subunit 5; n=38; Eumetazoa|Rep: Eukaryotic translation
initiation factor 3 subunit 5 - Homo sapiens (Human)
Length = 357
Score = 142 bits (345), Expect = 6e-33
Identities = 77/217 (35%), Positives = 113/217 (52%), Gaps = 1/217 (0%)
Frame = -3
Query: 716 DQVEAELNYAMDVYELNRRVNSSESIVGXWATGNEVTNHSSVIHEYYSRECREPVHVTLD 537
D+V ++ +A ++YEL+++V+ +E I+G +ATG+++T HS +IHEYYSRE P+H+T+D
Sbjct: 144 DEVAVDMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVD 203
Query: 536 TSLAGGRMGLRAYVCVPLGVPNGKQGCMFTPVDVTLTCYEPEIVGLQVCQKTXXXXXXXX 357
TSL GRM ++AYV +GVP G MFTP+ V Y+ E +G+ + KT
Sbjct: 204 TSLQNGRMSIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKT---CFSPN 260
Query: 356 XXXXXXSDLAQV-MXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLQLAHSAPDLAK 180
SDL QV L+ L + P +
Sbjct: 261 RVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVP 320
Query: 179 DTFSDAFASSVKDLLMVVTLAQLIKTQLQLNEKLTLL 69
D F S++ DLLMV LA L ++Q+ LNEKL L
Sbjct: 321 DDFETMLNSNINDLLMVTYLANLTQSQIALNEKLVNL 357
>UniRef50_A1Z6K7 Cluster: CG8335-PA; n=1; Drosophila
melanogaster|Rep: CG8335-PA - Drosophila melanogaster
(Fruit fly)
Length = 286
Score = 108 bits (260), Expect = 1e-22
Identities = 65/221 (29%), Positives = 110/221 (49%), Gaps = 3/221 (1%)
Frame = -3
Query: 713 QVEAELNYAMDVYELNRRVNSSESIVGXWATGNEVTNHSSVIHEYYSRECRE--PVHVTL 540
+++ ++ YA +V ELN +E ++G + TG V+ +S+IH+YY REC E P+H+ +
Sbjct: 67 RIDLDMAYASEVLELNMFAYPNERVLGWFCTGKSVSRSASLIHDYYVRECCEGQPLHLLV 126
Query: 539 DTSLAGGRMGLRAYVCVPLGVPNGKQGCMFTPVDVTLTCYEPEIVGLQVCQKTXXXXXXX 360
D +L R+ R Y V +GVP G +G MF+ V + ++ ++V L+ C +
Sbjct: 127 DAALKNQRLSTRLYCAVEMGVPGGTKGLMFSLVPLEISNENSDLVALR-CIEKQSQQQAS 185
Query: 359 XXXXXXXSDLAQVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLQLAHSA-PDLA 183
+LAQV+ L A +A P L
Sbjct: 186 KQMERFVPELAQVVDATRDMQHRLDLVLRYINDVLARKKKPDNVVGRSLYAALTAVPLLD 245
Query: 182 KDTFSDAFASSVKDLLMVVTLAQLIKTQLQLNEKLTLLTSQ 60
D F F ++++D+LM +TL+ +IKTQL+++EKL+ + Q
Sbjct: 246 SDKFRVMFNTNLRDMLMAITLSTMIKTQLEISEKLSCMQDQ 286
>UniRef50_Q5DDP2 Cluster: SJCHGC06192 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC06192 protein - Schistosoma
japonicum (Blood fluke)
Length = 273
Score = 86.6 bits (205), Expect = 5e-16
Identities = 41/105 (39%), Positives = 66/105 (62%), Gaps = 2/105 (1%)
Frame = -3
Query: 719 ADQVEAELNYAMDVYELNRRVNSSESIVGXWATGNEVTNHSSVIHE-YYSRECREPVHVT 543
A V +L + + L R+VN S IVG +ATGNE+T VIH+ YY + + + +
Sbjct: 58 AADVCMDLEFGNSMAALERKVNHSHCIVGWYATGNEITVPYKVIHQDYYMHKSKNAILLL 117
Query: 542 LDTSLA-GGRMGLRAYVCVPLGVPNGKQGCMFTPVDVTLTCYEPE 411
+DT+++ G +M +A++C +G+P GK+G +F PV+V + CY PE
Sbjct: 118 VDTNMSFGDKMSTKAFLCRHMGIPGGKRGSIFVPVEVEVECYGPE 162
Score = 36.7 bits (81), Expect = 0.58
Identities = 19/43 (44%), Positives = 24/43 (55%)
Frame = -3
Query: 218 LLQLAHSAPDLAKDTFSDAFASSVKDLLMVVTLAQLIKTQLQL 90
+ QL S P L D SS KDLLM+ LA LI+T L++
Sbjct: 226 IAQLIFSIPKLDPDHLEQLINSSYKDLLMITYLANLIRTHLKI 268
>UniRef50_Q4PI88 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 301
Score = 82.2 bits (194), Expect = 1e-14
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 5/221 (2%)
Frame = -3
Query: 713 QVEAELNYAMDVYELNRRVNSSESIVGXWATGNEVTNHSSVIHEYYSREC--REPVHVTL 540
QV+ ++ Y +YEL ++V E IVG +AT E+ +S++I ++YSRE + VH+T+
Sbjct: 87 QVQVDMEYHRSMYELCQKVRPDEVIVGWYATSPELNTYSALIQDFYSRETAPHQAVHLTM 146
Query: 539 DTSLAGGR---MGLRAYVCVPLGVPNGKQGCMFTPVDVTLTCYEPEIVGLQVCQKTXXXX 369
DT++ G + +G+++Y+ PLG + C+F P+ L PE L + +
Sbjct: 147 DTTIDGSKPSGLGIKSYISSPLGATPKAENCVFLPLPTNLLHSTPEHSSLSLL-ASQNIS 205
Query: 368 XXXXXXXXXXSDLAQVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLQLAHSAPD 189
L QV +++
Sbjct: 206 SPLTDLDALAVSLKQVQSQLDRVLTYVRAVISGEKEGDKAVGRFLNDTISVVPAG----- 260
Query: 188 LAKDTFSDAFASSVKDLLMVVTLAQLIKTQLQLNEKLTLLT 66
L + F + ++D+LMV LA +++ Q +++ +LTLLT
Sbjct: 261 LDDNKLETLFNAHLQDVLMVSYLANVVRAQAEVSSRLTLLT 301
>UniRef50_O04202 Cluster: Eukaryotic translation initiation factor 3
subunit 5; n=7; Magnoliophyta|Rep: Eukaryotic
translation initiation factor 3 subunit 5 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 293
Score = 77.0 bits (181), Expect = 4e-13
Identities = 38/113 (33%), Positives = 65/113 (57%)
Frame = -3
Query: 719 ADQVEAELNYAMDVYELNRRVNSSESIVGXWATGNEVTNHSSVIHEYYSRECREPVHVTL 540
+DQV +++Y ++ + +VNS E+IVG ++TG V SS+IH++Y+RE P+H+T+
Sbjct: 80 SDQVAVDIDYHHNMLASHLKVNSKETIVGWYSTGAGVNGGSSLIHDFYAREVPNPIHLTV 139
Query: 539 DTSLAGGRMGLRAYVCVPLGVPNGKQGCMFTPVDVTLTCYEPEIVGLQVCQKT 381
DT G ++A+V L + + + F + V L + E VG V + T
Sbjct: 140 DTGFTNGEGTIKAFVSSNLSLGDRQLVAHFQEIPVDLRMVDAERVGFDVLKAT 192
>UniRef50_Q54C49 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 284
Score = 70.9 bits (166), Expect = 3e-11
Identities = 51/218 (23%), Positives = 91/218 (41%), Gaps = 4/218 (1%)
Frame = -3
Query: 716 DQVEAELNYAMDVYELNRRVNSSESIVGXWATGNEVTNHSSVIHEYYSREC--REPVHVT 543
+Q+ E+ Y + +L+ + + E I+G +ATGN++ +S I+ +Y E P+H+T
Sbjct: 66 EQIAVEMEYQRKMLDLHLKSSPREPIIGWYATGNDINENSVHINNFYRDEMGNSTPIHLT 125
Query: 542 LDTSLAGGRMGLRAYVCVPLGV-PNGKQGCMFTPVDVTLTCYEPEIVGLQVCQKTXXXXX 366
+DT L MG+ AY+ L + P G F+ + + + +E E GL+ +T
Sbjct: 126 VDTGLTNDTMGIHAYMAHNLSLNPESSLGSYFSQLPLEILTFEAENAGLESIAQT----K 181
Query: 365 XXXXXXXXXSDLAQVMXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXALLQLAHSAPD 189
S+L + L + + P
Sbjct: 182 YDQQSTSLLSELESLQGSLTKLDEMLESITSYIESVEKGEIQGDPRLGRFLAKTIQALPK 241
Query: 188 LAKDTFSDAFASSVKDLLMVVTLAQLIKTQLQLNEKLT 75
+SVKDLLM+V L+ L ++QL + K++
Sbjct: 242 ANAQVMDKVINNSVKDLLMIVYLSSLTRSQLAVATKIS 279
>UniRef50_Q6C4H1 Cluster: Similar to tr|Q9P748 Neurospora crassa
Related to translation initiation factor 3; n=1;
Yarrowia lipolytica|Rep: Similar to tr|Q9P748 Neurospora
crassa Related to translation initiation factor 3 -
Yarrowia lipolytica (Candida lipolytica)
Length = 294
Score = 70.5 bits (165), Expect = 4e-11
Identities = 53/219 (24%), Positives = 89/219 (40%), Gaps = 4/219 (1%)
Frame = -3
Query: 713 QVEAELNYAMDVYELNRRVNSSESIVGXWATGNEVTNHSSVIHEYYSRECREP-VHVTLD 537
++ +L Y + L+R+ E IVG +AT +E+ S +IH+YY++ P +H+T++
Sbjct: 75 EMTIDLEYNPTMLALHRKAFPKEVIVGWYATSSELNTFSGLIHDYYTQLDGTPAIHLTVE 134
Query: 536 TSLAGGRMGLRAYVCVPLGV-PNGKQG-CMFTPVDVTLTCYE-PEIVGLQVCQKTXXXXX 366
+ + R YV +G+ P+ G C+F P+ + + + L+
Sbjct: 135 AANLADTLLPRTYVASAVGIDPSKNSGNCVFVPISNEVKFNDSADRAALEAISSARESPE 194
Query: 365 XXXXXXXXXSDLAQVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLQLAHSAPDL 186
++L + LL P L
Sbjct: 195 RSINLTSDLANLENSLTQVLDMLERVQTYVARVISGEESSEKAQQVGKQLLSTLTLTPSL 254
Query: 185 AKDTFSDAFASSVKDLLMVVTLAQLIKTQLQLNEKLTLL 69
F S ++D+LMVV LA +KTQLQL+ KLT L
Sbjct: 255 DAQNLEALFNSHLQDVLMVVYLANTVKTQLQLSAKLTTL 293
>UniRef50_A7AT42 Cluster: Mov34/MPN/PAD-1 family protein; n=3;
Piroplasmida|Rep: Mov34/MPN/PAD-1 family protein -
Babesia bovis
Length = 314
Score = 56.8 bits (131), Expect = 5e-07
Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 12/113 (10%)
Frame = -3
Query: 683 DVYELNRRVNSSESIVGXWATGNEVTNHSSVIHEYYSR-----------ECREPVHVTLD 537
++Y+L ++VN E +VG ++TG E+T + +H ++ + EP+H+ +D
Sbjct: 98 NMYDLKQKVNPKEQVVGWFSTGGEMTELTCAVHGWFKQFNTVSKFYPQPNLYEPIHLLVD 157
Query: 536 TSLAGGRMGLRAYVCVPLGVPNGKQGC-MFTPVDVTLTCYEPEIVGLQVCQKT 381
+ G M ++AYV +PL + K+ C F VD+ L E VG+ K+
Sbjct: 158 ATCDSGSMSIKAYVQLPLNLT--KEACFQFHEVDLELMISPSESVGVSTLLKS 208
>UniRef50_O43060 Cluster: Translation initiation factor eIF3f; n=16;
Ascomycota|Rep: Translation initiation factor eIF3f -
Schizosaccharomyces pombe (Fission yeast)
Length = 302
Score = 56.4 bits (130), Expect = 7e-07
Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 14/231 (6%)
Frame = -3
Query: 719 ADQVEAELNYAMDVYELNRRVNSSESIVGXWATGNEVTNHSSVIHEYYSRECREP----- 555
++QVE E+ Y +Y L+ + N E +VG +AT ++ S++I Y+ EP
Sbjct: 76 SEQVEVEMEYHRAMYHLHLKANPREVVVGWYATSPDLDAFSALIQNLYASPA-EPGTAPL 134
Query: 554 -------VHVTLDTSLAGGRMGLRAYVCVPLGVPNG-KQGCMFTPVDVTLTCYEPEIVGL 399
VH+T++T ++ + ++ YV P+G+ C F P T+ E GL
Sbjct: 135 GTYPHPCVHLTVNTDVS-SPLAIKTYVSSPVGITERLADSCAFVPTPFTIRDDEAVRSGL 193
Query: 398 QVCQKTXXXXXXXXXXXXXXSDLAQVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA 219
+ +DL Q+
Sbjct: 194 KA---VAAPKNDPSRLASLFTDLQQLRRSTLELLSMIERVSDYVQNVIDGSSPANVAVGR 250
Query: 218 LLQLAHS-APDLAKDTFSDAFASSVKDLLMVVTLAQLIKTQLQLNEKLTLL 69
L S P + F F+S ++D+L+VV LA ++TQ+ + +L LL
Sbjct: 251 YLMKCFSLIPCVEGQDFEKIFSSHLQDVLVVVYLANTLRTQVDIASRLNLL 301
>UniRef50_Q5KER5 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 303
Score = 56.0 bits (129), Expect = 9e-07
Identities = 31/111 (27%), Positives = 60/111 (54%), Gaps = 4/111 (3%)
Frame = -3
Query: 713 QVEAELNYAMDVYELNRRVNSSESIVGXWATGNEVTNHSSVIHEYYSRECR--EPVHVTL 540
Q+ + + D+ + + E IVG +A+ V ++S++I EY+S E VH+T+
Sbjct: 84 QISVDRPFQQDMVNFLAKNGTKEVIVGWYASQKTVNSNSAIIQEYFSFETNPYPAVHLTV 143
Query: 539 DTSL--AGGRMGLRAYVCVPLGVPNGKQGCMFTPVDVTLTCYEPEIVGLQV 393
DT + +G +G++ +V PLG+ + + +F PV V++ + E L +
Sbjct: 144 DTDIEESGKGLGVKGWVSQPLGLTSKSECSVFVPVPVSIKYADSERAALDL 194
>UniRef50_A4RTI9 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 267
Score = 53.2 bits (122), Expect = 6e-06
Identities = 51/204 (25%), Positives = 73/204 (35%), Gaps = 6/204 (2%)
Frame = -3
Query: 671 LNRRVNSSESIVGXWATGNEVTNHSSVIHEYYSRECRE--PVHVTLDTSLAGGRMG---L 507
L+ RVN E +VG ++ G+ +++HE++++E PVHV LD G G L
Sbjct: 58 LHARVNPEERVVGWFSAGSVTPEARALVHEFFAKEALNGTPVHVMLDADFTGAGNGGEML 117
Query: 506 RAYVCVPLGVPNGKQGCMFTPVDVTLTCYEPEIVGLQVCQKTXXXXXXXXXXXXXXSDLA 327
A V + ++ V + E E V LQ K D+A
Sbjct: 118 SASVGDTVLATTDRESGESRSAGVWFSEIECE-VDLQQATKLGVESLRSASSAKDDDDVA 176
Query: 326 QVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLQLA-HSAPDLAKDTFSDAFASS 150
+ L A P L K F F S
Sbjct: 177 GLAQTMGKLGKLLTDAQAYVDAVVRGERQGDAEVGRALSAALAGVPQLTKAQFDKVFGDS 236
Query: 149 VKDLLMVVTLAQLIKTQLQLNEKL 78
+D++MV L L +TQL L EKL
Sbjct: 237 AEDVMMVRYLTNLTRTQLTLAEKL 260
>UniRef50_Q8I323 Cluster: 26S proteasome regulatory subunit,
putative; n=8; Plasmodium|Rep: 26S proteasome regulatory
subunit, putative - Plasmodium falciparum (isolate 3D7)
Length = 338
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/104 (23%), Positives = 50/104 (48%)
Frame = -3
Query: 695 NYAMDVYELNRRVNSSESIVGXWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGR 516
NY +++ + R++N+ E IVG + TG+ + + I+E + + P+ + ++
Sbjct: 85 NYNENLFNMIRKINTREKIVGWYTTGSNIKPNDIFINEIFYKYHHAPIFLLVNVHTDQSI 144
Query: 515 MGLRAYVCVPLGVPNGKQGCMFTPVDVTLTCYEPEIVGLQVCQK 384
+ AYV + + K F + V + +E E VG++ K
Sbjct: 145 FPVNAYVAIEKAIHENKFRKTFIHIPVKIGAFEAEEVGVEFLLK 188
>UniRef50_Q016I5 Cluster: Predicted ATP-dependent RNA helicase FAL1,
involved in rRNA maturation, DEAD-box superfamily; n=2;
Ostreococcus|Rep: Predicted ATP-dependent RNA helicase
FAL1, involved in rRNA maturation, DEAD-box superfamily
- Ostreococcus tauri
Length = 1222
Score = 46.8 bits (106), Expect = 5e-04
Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Frame = -3
Query: 692 YAMDVYELNRRVNSSESIVGXWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGRM 513
Y ++Y ++R++++ E IVG ++TG ++ ++ IHE + +EPV V +D +
Sbjct: 77 YLENMYRMSRKISAKEKIVGWYSTGPKLRDNDIDIHELFYAYAQEPVMVIVDVRAENANI 136
Query: 512 GLRAYVCVPLGVPNG--KQGCMFTPVDVTLTCYEPEIVGLQ 396
A+ +G KQ F V ++ +E E +G++
Sbjct: 137 PTSAFAAQIEVKEDGTEKQQKTFVHVPNSIQAFEAEEIGVE 177
>UniRef50_A7ATP2 Cluster: 26S proteasome regulatory particle
non-ATPase subunit8, putative; n=3; Piroplasmida|Rep:
26S proteasome regulatory particle non-ATPase subunit8,
putative - Babesia bovis
Length = 306
Score = 46.8 bits (106), Expect = 5e-04
Identities = 25/100 (25%), Positives = 50/100 (50%)
Frame = -3
Query: 695 NYAMDVYELNRRVNSSESIVGXWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGR 516
NY ++ + +++N+ E ++G ++TG + IHE Y + C P+++ +D +
Sbjct: 79 NYHERMFTMFKKINTKEKVLGWYSTGPKCKPADLEIHELYRKYCPNPIYIIVDIN-QKEE 137
Query: 515 MGLRAYVCVPLGVPNGKQGCMFTPVDVTLTCYEPEIVGLQ 396
+ + AYV V + + F V + +E E VGL+
Sbjct: 138 VPIEAYVSVEEPTSDRRFRRTFAHVPSEMGAFEAEEVGLE 177
>UniRef50_Q5CJF2 Cluster: 26S proteasome regulatory particle
non-ATPase subunit8; n=2; Cryptosporidium|Rep: 26S
proteasome regulatory particle non-ATPase subunit8 -
Cryptosporidium hominis
Length = 313
Score = 44.0 bits (99), Expect = 0.004
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Frame = -3
Query: 695 NYAMDVYELNRRVNSSESIVGXWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGR 516
NY +Y + +++N+ E IVG ++TG + IHE + R C +P+++ D +
Sbjct: 89 NYHEQMYLMFKKINTKEKIVGWYSTGPKTKVVDIDIHELFRRYCPDPLYLIADVTADDFE 148
Query: 515 -MGLRAYVCVPLGVPNGKQGCMFTPVDVTLTCYEPEIVGLQ 396
+ + PN F V T+ +E E VG++
Sbjct: 149 YLSSPISAYFSMDEPNSVLKKKFAHVPCTIGAFEAEEVGVE 189
>UniRef50_A5K6P8 Cluster: Eukaryotic translation initiation factor 3
subunit 5, putative; n=5; Plasmodium|Rep: Eukaryotic
translation initiation factor 3 subunit 5, putative -
Plasmodium vivax
Length = 320
Score = 43.2 bits (97), Expect = 0.007
Identities = 19/77 (24%), Positives = 42/77 (54%), Gaps = 11/77 (14%)
Frame = -3
Query: 680 VYELNRRVNSSESIVGXWATGNEVTNHSSVIHEYYSRE-----------CREPVHVTLDT 534
+YEL +++ + +VG + +G+E++ S +H ++ EP+H+ +D
Sbjct: 99 MYELKQKIRPRDQVVGWFCSGSELSELSCAVHGWFKEHNSISKFYPHSPLNEPIHLLVDA 158
Query: 533 SLAGGRMGLRAYVCVPL 483
+L G + ++AYV +P+
Sbjct: 159 ALESGFLNIKAYVQLPI 175
>UniRef50_A0CZC8 Cluster: Chromosome undetermined scaffold_32, whole
genome shotgun sequence; n=3; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_32, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 289
Score = 42.7 bits (96), Expect = 0.009
Identities = 25/100 (25%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Frame = -3
Query: 692 YAMDVYELNRRVNSSESIVGXWATGNEVTNHSSVIHEYYSRECREPVHVTLDT-SLAGGR 516
Y ++EL+R++N +E IVG ++TG+ + I++ + + P+ V +D
Sbjct: 76 YNETLFELHRKININEKIVGWYSTGSRFKPNDIQINQIFYKYTSTPIFVIIDVHQFDPLS 135
Query: 515 MGLRAYVCVPLGVPNGKQGCMFTPVDVTLTCYEPEIVGLQ 396
+ AY V +G+ F + T+ +EPE +G++
Sbjct: 136 LPTEAYTSVDEISKSGEIIQNFVHIPSTVQAFEPEEIGVE 175
>UniRef50_Q4Q5P6 Cluster: Proteasome regulatory non-ATP-ase subunit
8, putative; n=7; Trypanosomatidae|Rep: Proteasome
regulatory non-ATP-ase subunit 8, putative - Leishmania
major
Length = 359
Score = 39.9 bits (89), Expect = 0.062
Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Frame = -3
Query: 701 ELNYAMDVYELNRRVNSSESIVGXWATGNEVTNHSSVIHEYYS-RECREPVHVTLDTSLA 525
+ NYA +++ +++RV +VG +++G + + ++H + R C PV+ ++T
Sbjct: 112 DTNYAQEMFAMHKRVLPKVKVVGWYSSGPTIQPNDMLLHLLVADRFCLNPVYCVVNTDPN 171
Query: 524 GGRMGLRAYVCVPLGVPNGKQGCMFTPVDVTLTCYEPEIVGLQ 396
+ +RAY V G + F + L E E +G++
Sbjct: 172 NKGVPVRAYTTVQ--GREGTRSLEFRNIPTHLGAEEAEEIGIE 212
>UniRef50_P51665 Cluster: 26S proteasome non-ATPase regulatory
subunit 7; n=51; Eukaryota|Rep: 26S proteasome
non-ATPase regulatory subunit 7 - Homo sapiens (Human)
Length = 324
Score = 38.7 bits (86), Expect = 0.14
Identities = 45/207 (21%), Positives = 75/207 (36%), Gaps = 4/207 (1%)
Frame = -3
Query: 695 NYAMDVYELNRRVNSSESIVGXWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGR 516
+Y ++Y + ++VN+ E IVG + TG ++ + I+E R C V V +D
Sbjct: 73 DYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLG 132
Query: 515 MGLRAYVCVPL----GVPNGKQGCMFTPVDVTLTCYEPEIVGLQVCQKTXXXXXXXXXXX 348
+ AY+ V G P K F V + E E VG++ +
Sbjct: 133 LPTEAYISVEEVHDDGTPTSK---TFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQ 189
Query: 347 XXXSDLAQVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLQLAHSAPDLAKDTFS 168
+ QV L + + PD++ F
Sbjct: 190 RITN---QVHGLKGLNSKLLDIRSYLEKVATGKLPINHQIIYQLQDVFNLLPDVSLQEFV 246
Query: 167 DAFASSVKDLLMVVTLAQLIKTQLQLN 87
AF D ++VV LA LI++ + L+
Sbjct: 247 KAFYLKTNDQMVVVYLASLIRSVVALH 273
>UniRef50_UPI00015533C8 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 146
Score = 37.5 bits (83), Expect = 0.33
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = -3
Query: 218 LLQLAHSAPDLAKDTFSDAFASSVKDLLMVVTLAQLIKTQLQLNEKL 78
L+ L + P + D F S + DLL+V L LI++Q+ +N+KL
Sbjct: 97 LISLVNQVPKIVIDDFEIMLNSHINDLLLVTYLVYLIQSQISINKKL 143
>UniRef50_UPI0000498D3B Cluster: proteasome regulatory subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome
regulatory subunit - Entamoeba histolytica HM-1:IMSS
Length = 314
Score = 36.7 bits (81), Expect = 0.58
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = -3
Query: 692 YAMDVYELNRRVNSSESIVGXWATGNEVTNHSSVIHEYYSRECREPVHVTLDTS 531
Y VY + +RV + E +VG ++T + + IH ++ PV++T+D S
Sbjct: 75 YLETVYRMTQRVTAKEVLVGWYSTSSSIKPCDIQIHSVINKYTAHPVYLTVDVS 128
>UniRef50_Q54WI8 Cluster: 26S proteasome non-ATPase regulatory
subunit 7; n=1; Dictyostelium discoideum AX4|Rep: 26S
proteasome non-ATPase regulatory subunit 7 -
Dictyostelium discoideum AX4
Length = 325
Score = 36.7 bits (81), Expect = 0.58
Identities = 17/69 (24%), Positives = 39/69 (56%)
Frame = -3
Query: 695 NYAMDVYELNRRVNSSESIVGXWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGR 516
N+ +++ + +++N+ E++VG ++TG ++ I+E + R PV V +D +
Sbjct: 71 NFHENMFAMFKKINARENVVGWYSTGPKIRPADQDINELFRRYTPNPVMVIIDVAPKELG 130
Query: 515 MGLRAYVCV 489
+ ++YV V
Sbjct: 131 IPTKSYVTV 139
>UniRef50_A4M8A3 Cluster: Flagellar export protein FliJ precursor;
n=1; Petrotoga mobilis SJ95|Rep: Flagellar export
protein FliJ precursor - Petrotoga mobilis SJ95
Length = 150
Score = 36.3 bits (80), Expect = 0.77
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = -3
Query: 179 DTFSDAFASSVKDLLMVVTLAQLIKTQLQLNEKLTLL 69
DTFSD F VKD + + L+ +I+ + LNE+L+ L
Sbjct: 47 DTFSDEFTKEVKDTISITKLSNMIEYKNHLNEQLSQL 83
>UniRef50_Q5AG96 Cluster: Potential translation initiation factor
eIF3-epsilon-p47 subunit; n=5; Saccharomycetales|Rep:
Potential translation initiation factor eIF3-epsilon-p47
subunit - Candida albicans (Yeast)
Length = 335
Score = 36.3 bits (80), Expect = 0.77
Identities = 12/49 (24%), Positives = 31/49 (63%)
Frame = -3
Query: 716 DQVEAELNYAMDVYELNRRVNSSESIVGXWATGNEVTNHSSVIHEYYSR 570
D + E +Y+L ++ + E+++G + + N++ + +S+IH++YS+
Sbjct: 82 DSIAIEDQVHKSLYQLYKKAHPKETVLGWFGSSNQIDDITSLIHDFYSK 130
>UniRef50_Q5W901 Cluster: Cytochrome c oxidase subunit 3; n=1;
Lingula anatina|Rep: Cytochrome c oxidase subunit 3 -
Lingula unguis
Length = 275
Score = 35.1 bits (77), Expect = 1.8
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = -1
Query: 595 LLYTSIIPVNAVSLSMLLWTLRWLEVEWVYVHMFVYHW 482
++Y S P + S+ M +W ++++ WV ++F+Y W
Sbjct: 236 MVYGSYSPSHMTSIQMSVWYWHFVDIVWVAAYLFIYIW 273
>UniRef50_Q5CYT6 Cluster: EIF3-p47 with JAB/PAD domain; n=2;
Cryptosporidium|Rep: EIF3-p47 with JAB/PAD domain -
Cryptosporidium parvum Iowa II
Length = 349
Score = 34.7 bits (76), Expect = 2.3
Identities = 14/73 (19%), Positives = 38/73 (52%), Gaps = 11/73 (15%)
Frame = -3
Query: 680 VYELNRRVNSSESIVGXWATGNEVTNHSSVIHEYYSRE-----------CREPVHVTLDT 534
++EL ++ NS ++G ++T + + + S ++ ++ + EP+H+ +D
Sbjct: 106 MFELKQKTNSRLQVIGWYSTCSGINSVSCAVNNWFKTDIGSSKFQQTPLLSEPIHIVVDP 165
Query: 533 SLAGGRMGLRAYV 495
S + G++ + Y+
Sbjct: 166 SFSNGKLSINGYI 178
>UniRef50_A2DP46 Cluster: Clan MP, family M67, Poh1-like
metallopeptidase; n=2; Trichomonas vaginalis G3|Rep:
Clan MP, family M67, Poh1-like metallopeptidase -
Trichomonas vaginalis G3
Length = 311
Score = 33.9 bits (74), Expect = 4.1
Identities = 14/55 (25%), Positives = 30/55 (54%)
Frame = -3
Query: 701 ELNYAMDVYELNRRVNSSESIVGXWATGNEVTNHSSVIHEYYSRECREPVHVTLD 537
+ N+ ++Y L+++V E I+G +++ V+ + IH C +P+ +T D
Sbjct: 74 DTNFIEEMYSLHKKVTLKEKIIGWYSSLATVSPNDLEIHRKMCDYCPDPIFLTTD 128
>UniRef50_Q2MJW1 Cluster: COP9 signalosome subunit 6; n=1;
Chlamydomonas reinhardtii|Rep: COP9 signalosome subunit
6 - Chlamydomonas reinhardtii
Length = 314
Score = 33.5 bits (73), Expect = 5.4
Identities = 23/107 (21%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Frame = -3
Query: 710 VEAELNYAMDVYELNRRVNSSESIVGXWATGNEVTNHSSVIHEYYSRECREPVHVTLDTS 531
++ ++ Y + E ++V + +VG +ATG +T + H S PV + LD +
Sbjct: 80 LDIDITYLLKKQEQYKQVFKNLDVVGWYATGAAITEGHRLAHRKISEVVESPVFLLLDPA 139
Query: 530 LAGGRMGLRAYVC---VPLGVPNGKQGCMFTPVDVTLTCYEPEIVGL 399
+ R L + + L G G +F ++ + E +G+
Sbjct: 140 VDHTRKDLPVSLYETELHLSPETGAPGMVFVKSPYSIETSDAERIGV 186
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 601,001,317
Number of Sequences: 1657284
Number of extensions: 11153148
Number of successful extensions: 32100
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32082
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58677691418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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