Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11l03r
         (724 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    27   0.44 
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          24   5.5  
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    24   5.5  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   5.5  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    23   9.6  

>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 27.5 bits (58), Expect = 0.44
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = -3

Query: 656 NSSESIVGXWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLA 525
           NSSE ++   ATGN  TN +  +  +  ++  +P  V+    LA
Sbjct: 806 NSSERMLPSGATGNNSTNSAYSMQSHQQQQHHQPSAVSNSNGLA 849


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +1

Query: 460  PCFPFGTPNGTQTYARKPIRPPASEVS-RVTWTGSRHSR 573
            P  P+G  NGT +    P  PP S  S R+T  G   +R
Sbjct: 1120 PRTPYGLSNGTSS----PALPPKSPTSQRITLPGRYEAR 1154


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 208 SHIPHLTLPRTPSQMPSPP 152
           S  PH  LP TP+  P  P
Sbjct: 75  SVFPHAALPHTPTNQPIVP 93


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +3

Query: 423 ACESDIYRSEHATLLSIWHSQWYTN 497
           A  + I R E A  L +W  +W  N
Sbjct: 863 ASRAVIRREERAVTLEVWQREWDAN 887


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = -1

Query: 646 KVLLVXGRLAMK*PTTPLLYTSIIPVNAVSLSMLLW 539
           ++L   G LA++  +TP+L T+       +   +LW
Sbjct: 413 ELLRAYGNLALRRTSTPMLSTTTTTTTNRTAETILW 448


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 643,710
Number of Sequences: 2352
Number of extensions: 13685
Number of successful extensions: 26
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)