Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11l03r
(724 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U94855-1|AAD03467.1| 357|Homo sapiens translation initiation fa... 142 9e-34
CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein. 142 9e-34
BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation ... 142 9e-34
BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation ... 142 9e-34
AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens ... 142 9e-34
AF354444-1|AAK18634.1| 348|Homo sapiens IFP38 protein. 125 1e-28
D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 / ... 39 0.021
BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome, ma... 39 0.021
BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein. 39 0.021
BC041372-1|AAH41372.2| 296|Homo sapiens LOC283514 protein protein. 30 7.3
AL050051-1|CAB43251.1| 118|Homo sapiens hypothetical protein pr... 30 9.6
>U94855-1|AAD03467.1| 357|Homo sapiens translation initiation
factor 3 47 kDa subunit protein.
Length = 357
Score = 142 bits (345), Expect = 9e-34
Identities = 77/217 (35%), Positives = 113/217 (52%), Gaps = 1/217 (0%)
Frame = -3
Query: 716 DQVEAELNYAMDVYELNRRVNSSESIVGXWATGNEVTNHSSVIHEYYSRECREPVHVTLD 537
D+V ++ +A ++YEL+++V+ +E I+G +ATG+++T HS +IHEYYSRE P+H+T+D
Sbjct: 144 DEVAVDMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVD 203
Query: 536 TSLAGGRMGLRAYVCVPLGVPNGKQGCMFTPVDVTLTCYEPEIVGLQVCQKTXXXXXXXX 357
TSL GRM ++AYV +GVP G MFTP+ V Y+ E +G+ + KT
Sbjct: 204 TSLQNGRMSIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKT---CFSPN 260
Query: 356 XXXXXXSDLAQV-MXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLQLAHSAPDLAK 180
SDL QV L+ L + P +
Sbjct: 261 RVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVP 320
Query: 179 DTFSDAFASSVKDLLMVVTLAQLIKTQLQLNEKLTLL 69
D F S++ DLLMV LA L ++Q+ LNEKL L
Sbjct: 321 DDFETMLNSNINDLLMVTYLANLTQSQIALNEKLVNL 357
>CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein.
Length = 357
Score = 142 bits (345), Expect = 9e-34
Identities = 77/217 (35%), Positives = 113/217 (52%), Gaps = 1/217 (0%)
Frame = -3
Query: 716 DQVEAELNYAMDVYELNRRVNSSESIVGXWATGNEVTNHSSVIHEYYSRECREPVHVTLD 537
D+V ++ +A ++YEL+++V+ +E I+G +ATG+++T HS +IHEYYSRE P+H+T+D
Sbjct: 144 DEVAVDMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVD 203
Query: 536 TSLAGGRMGLRAYVCVPLGVPNGKQGCMFTPVDVTLTCYEPEIVGLQVCQKTXXXXXXXX 357
TSL GRM ++AYV +GVP G MFTP+ V Y+ E +G+ + KT
Sbjct: 204 TSLQNGRMSIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKT---CFSPN 260
Query: 356 XXXXXXSDLAQV-MXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLQLAHSAPDLAK 180
SDL QV L+ L + P +
Sbjct: 261 RVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVP 320
Query: 179 DTFSDAFASSVKDLLMVVTLAQLIKTQLQLNEKLTLL 69
D F S++ DLLMV LA L ++Q+ LNEKL L
Sbjct: 321 DDFETMLNSNINDLLMVTYLANLTQSQIALNEKLVNL 357
>BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 142 bits (345), Expect = 9e-34
Identities = 77/217 (35%), Positives = 113/217 (52%), Gaps = 1/217 (0%)
Frame = -3
Query: 716 DQVEAELNYAMDVYELNRRVNSSESIVGXWATGNEVTNHSSVIHEYYSRECREPVHVTLD 537
D+V ++ +A ++YEL+++V+ +E I+G +ATG+++T HS +IHEYYSRE P+H+T+D
Sbjct: 144 DEVAVDMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVD 203
Query: 536 TSLAGGRMGLRAYVCVPLGVPNGKQGCMFTPVDVTLTCYEPEIVGLQVCQKTXXXXXXXX 357
TSL GRM ++AYV +GVP G MFTP+ V Y+ E +G+ + KT
Sbjct: 204 TSLQNGRMSIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKT---CFSPN 260
Query: 356 XXXXXXSDLAQV-MXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLQLAHSAPDLAK 180
SDL QV L+ L + P +
Sbjct: 261 RVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVP 320
Query: 179 DTFSDAFASSVKDLLMVVTLAQLIKTQLQLNEKLTLL 69
D F S++ DLLMV LA L ++Q+ LNEKL L
Sbjct: 321 DDFETMLNSNINDLLMVTYLANLTQSQIALNEKLVNL 357
>BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 142 bits (345), Expect = 9e-34
Identities = 77/217 (35%), Positives = 113/217 (52%), Gaps = 1/217 (0%)
Frame = -3
Query: 716 DQVEAELNYAMDVYELNRRVNSSESIVGXWATGNEVTNHSSVIHEYYSRECREPVHVTLD 537
D+V ++ +A ++YEL+++V+ +E I+G +ATG+++T HS +IHEYYSRE P+H+T+D
Sbjct: 144 DEVAVDMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVD 203
Query: 536 TSLAGGRMGLRAYVCVPLGVPNGKQGCMFTPVDVTLTCYEPEIVGLQVCQKTXXXXXXXX 357
TSL GRM ++AYV +GVP G MFTP+ V Y+ E +G+ + KT
Sbjct: 204 TSLQNGRMSIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKT---CFSPN 260
Query: 356 XXXXXXSDLAQV-MXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLQLAHSAPDLAK 180
SDL QV L+ L + P +
Sbjct: 261 RVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVP 320
Query: 179 DTFSDAFASSVKDLLMVVTLAQLIKTQLQLNEKLTLL 69
D F S++ DLLMV LA L ++Q+ LNEKL L
Sbjct: 321 DDFETMLNSNINDLLMVTYLANLTQSQIALNEKLVNL 357
>AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens
cDNA FLJ38255 fis, clone FCBBF3001020, highly similar to
EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 5. ).
Length = 350
Score = 142 bits (345), Expect = 9e-34
Identities = 77/217 (35%), Positives = 113/217 (52%), Gaps = 1/217 (0%)
Frame = -3
Query: 716 DQVEAELNYAMDVYELNRRVNSSESIVGXWATGNEVTNHSSVIHEYYSRECREPVHVTLD 537
D+V ++ +A ++YEL+++V+ +E I+G +ATG+++T HS +IHEYYSRE P+H+T+D
Sbjct: 137 DEVAVDMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVD 196
Query: 536 TSLAGGRMGLRAYVCVPLGVPNGKQGCMFTPVDVTLTCYEPEIVGLQVCQKTXXXXXXXX 357
TSL GRM ++AYV +GVP G MFTP+ V Y+ E +G+ + KT
Sbjct: 197 TSLQNGRMSIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKT---CFSPN 253
Query: 356 XXXXXXSDLAQV-MXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLQLAHSAPDLAK 180
SDL QV L+ L + P +
Sbjct: 254 RVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVP 313
Query: 179 DTFSDAFASSVKDLLMVVTLAQLIKTQLQLNEKLTLL 69
D F S++ DLLMV LA L ++Q+ LNEKL L
Sbjct: 314 DDFETMLNSNINDLLMVTYLANLTQSQIALNEKLVNL 350
>AF354444-1|AAK18634.1| 348|Homo sapiens IFP38 protein.
Length = 348
Score = 125 bits (302), Expect = 1e-28
Identities = 71/217 (32%), Positives = 110/217 (50%), Gaps = 4/217 (1%)
Frame = -3
Query: 719 ADQVEAELNYAMDVYELNRRVNSSESIVGXWATGNEVTNHSSVIHEYYSRECREPVHVTL 540
+D+V ++ +A ++YEL+++V+ +E I+G +A G+++T HS +IHEYYSRE P+H+T+
Sbjct: 132 SDEVVVDMEFAKNMYELHKKVSPNELILGWYAAGHDITEHSVLIHEYYSREAPNPIHLTV 191
Query: 539 DTSLAGGRMGLRAYVCVPLGVPNGKQGCMFTPVDVTLTCYEPEIVGLQVCQKTXXXXXXX 360
DTSL G M ++AYV +GVP G+ +FTP+ V Y+ E + + + KT
Sbjct: 192 DTSLQNGHMSIKAYVSTLMGVP-GRTVGVFTPLTVKYAYYDTECIRVDLIMKT---CFSP 247
Query: 359 XXXXXXXSDLAQVMXXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXALLQLAHSAP 192
SDL QV L+ L + P
Sbjct: 248 NRVVGLSSDLQQVGGASAHIQDALSIVLQYAEDILSAKVSADNTIRKVGHFLMSLVNQVP 307
Query: 191 DLAKDTFSDAFASSVKDLLMVVTLAQLIKTQLQLNEK 81
+ D F S++ DLLMV LA L ++Q+ LNEK
Sbjct: 308 KIVPDDFETMLHSNINDLLMVAYLANLTQSQIALNEK 344
>D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 /
Mov34 protein protein.
Length = 324
Score = 38.7 bits (86), Expect = 0.021
Identities = 43/204 (21%), Positives = 74/204 (36%), Gaps = 1/204 (0%)
Frame = -3
Query: 695 NYAMDVYELNRRVNSSESIVGXWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGR 516
+Y ++Y + ++VN+ E IVG + TG ++ + I+E R C V V +D
Sbjct: 73 DYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLG 132
Query: 515 MGLRAYVCVPLGVPNG-KQGCMFTPVDVTLTCYEPEIVGLQVCQKTXXXXXXXXXXXXXX 339
+ AY+ V +G F V + E E VG++ +
Sbjct: 133 LPTEAYISVEEDQDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRIT 192
Query: 338 SDLAQVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLQLAHSAPDLAKDTFSDAF 159
+ QV L + + PD++ F AF
Sbjct: 193 N---QVHGLKGLNSKLLDIRSYLEKVGTGKLPINHQIIYQLQDVFNLLPDVSLQEFVKAF 249
Query: 158 ASSVKDLLMVVTLAQLIKTQLQLN 87
D ++VV LA LI++ + L+
Sbjct: 250 YLKTNDQMVVVYLASLIRSVVALH 273
>BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog)
protein.
Length = 324
Score = 38.7 bits (86), Expect = 0.021
Identities = 45/207 (21%), Positives = 75/207 (36%), Gaps = 4/207 (1%)
Frame = -3
Query: 695 NYAMDVYELNRRVNSSESIVGXWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGR 516
+Y ++Y + ++VN+ E IVG + TG ++ + I+E R C V V +D
Sbjct: 73 DYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLG 132
Query: 515 MGLRAYVCVPL----GVPNGKQGCMFTPVDVTLTCYEPEIVGLQVCQKTXXXXXXXXXXX 348
+ AY+ V G P K F V + E E VG++ +
Sbjct: 133 LPTEAYISVEEVHDDGTPTSK---TFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQ 189
Query: 347 XXXSDLAQVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLQLAHSAPDLAKDTFS 168
+ QV L + + PD++ F
Sbjct: 190 RITN---QVHGLKGLNSKLLDIRSYLEKVATGKLPINHQIIYQLQDVFNLLPDVSLQEFV 246
Query: 167 DAFASSVKDLLMVVTLAQLIKTQLQLN 87
AF D ++VV LA LI++ + L+
Sbjct: 247 KAFYLKTNDQMVVVYLASLIRSVVALH 273
>BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein.
Length = 326
Score = 38.7 bits (86), Expect = 0.021
Identities = 45/207 (21%), Positives = 75/207 (36%), Gaps = 4/207 (1%)
Frame = -3
Query: 695 NYAMDVYELNRRVNSSESIVGXWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGR 516
+Y ++Y + ++VN+ E IVG + TG ++ + I+E R C V V +D
Sbjct: 73 DYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLG 132
Query: 515 MGLRAYVCVPL----GVPNGKQGCMFTPVDVTLTCYEPEIVGLQVCQKTXXXXXXXXXXX 348
+ AY+ V G P K F V + E E VG++ +
Sbjct: 133 LPTEAYISVEEVHDDGTPTSK---TFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQ 189
Query: 347 XXXSDLAQVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLQLAHSAPDLAKDTFS 168
+ QV L + + PD++ F
Sbjct: 190 RITN---QVHGLKGLNSKLLDIRSYLEKVATGKLPINHQIIYQLQDVFNLLPDVSLQEFV 246
Query: 167 DAFASSVKDLLMVVTLAQLIKTQLQLN 87
AF D ++VV LA LI++ + L+
Sbjct: 247 KAFYLKTNDQMVVVYLASLIRSVVALH 273
>BC041372-1|AAH41372.2| 296|Homo sapiens LOC283514 protein protein.
Length = 296
Score = 30.3 bits (65), Expect = 7.3
Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -2
Query: 531 AGWRSNGFT-CICLCTIGSAKWKARLHV 451
AG +N T C+C+C + S +W+ RL V
Sbjct: 122 AGLHANPVTPCLCMCPLFSCQWEGRLEV 149
>AL050051-1|CAB43251.1| 118|Homo sapiens hypothetical protein
protein.
Length = 118
Score = 29.9 bits (64), Expect = 9.6
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -3
Query: 563 REPVHVTLDTSLAGGRMGLRAYVCVPLG-VPNGKQGCMFTPVDVTLTC 423
R PV V+ L G G+R+ + V L +P G+ GC FT + V L C
Sbjct: 10 RVPVRVSSAPGLGFGGAGMRSLLSVGLPPIPIGR-GCHFTLITVFLYC 56
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,410,556
Number of Sequences: 237096
Number of extensions: 1824622
Number of successful extensions: 8437
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 8087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8436
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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