Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11l03r
         (724 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118972-1|AAM50832.1|  280|Drosophila melanogaster LD47792p pro...   236   2e-62
AE014297-137|AAF52101.1|  280|Drosophila melanogaster CG9769-PA ...   236   2e-62
AE013599-160|AAF57273.2|  286|Drosophila melanogaster CG8335-PA ...   107   2e-23
AY089283-1|AAL90021.1|  338|Drosophila melanogaster AT07973p pro...    37   0.024
AE013599-3862|AAF47199.1|  338|Drosophila melanogaster CG3416-PA...    37   0.024
M64643-1|AAA28695.1|  338|Drosophila melanogaster Mov34 protein.       33   0.39 
BT011129-1|AAR82796.1|  418|Drosophila melanogaster HL04005p pro...    31   2.1  
AY118964-1|AAM50824.1|  628|Drosophila melanogaster LD43740p pro...    31   2.1  
AE014297-2255|AAF55354.2|  628|Drosophila melanogaster CG31217-P...    31   2.1  
AE014297-4132|AAF56717.2|  403|Drosophila melanogaster CG31059-P...    30   3.7  
U09373-1|AAA83413.1|  745|Drosophila melanogaster N-ethylmaleimi...    29   8.5  
BT023938-1|ABB36442.1| 1103|Drosophila melanogaster RE04201p pro...    29   8.5  
BT010259-1|AAQ23577.1|  745|Drosophila melanogaster RE33604p pro...    29   8.5  
AY094813-1|AAM11166.1| 1413|Drosophila melanogaster LD30602p pro...    29   8.5  
AE014298-1870|AAF48244.2|  745|Drosophila melanogaster CG1618-PA...    29   8.5  
AE014134-2739|AAF53547.2| 1413|Drosophila melanogaster CG31738-P...    29   8.5  
AE014134-2738|AAF53546.3| 1700|Drosophila melanogaster CG31738-P...    29   8.5  

>AY118972-1|AAM50832.1|  280|Drosophila melanogaster LD47792p
           protein.
          Length = 280

 Score =  236 bits (578), Expect = 2e-62
 Identities = 118/220 (53%), Positives = 144/220 (65%), Gaps = 2/220 (0%)
 Frame = -3

Query: 722 HADQVEAELNYAMDVYELNRRVNSSESIVGXWATGNEVTNHSSVIHEYYSRECREPVHVT 543
           H DQVEAEL+YA+D+Y+LNR+VNS+ES+VG WATGN+VTNHSSVIHEYY+REC  PVH+T
Sbjct: 58  HDDQVEAELSYALDMYDLNRKVNSNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLT 117

Query: 542 LDTSLAGGRMGLRAYVCVPLGVPNGKQGCMFTPVDVTLTCYEPEIVGLQVCQKT-XXXXX 366
           +DTSL GGRMGLRAYVC+ LGVP GK GCMFTP+ V LT YEPE  GL++ QKT      
Sbjct: 118 VDTSLQGGRMGLRAYVCIQLGVPGGKSGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPA 177

Query: 365 XXXXXXXXXSDLAQVM-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLQLAHSAPD 189
                     DLAQ+                                   LL L HS P 
Sbjct: 178 HRPKTVPPMLDLAQISEASTKLQSLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPH 237

Query: 188 LAKDTFSDAFASSVKDLLMVVTLAQLIKTQLQLNEKLTLL 69
           +  + F+  F ++V++LL+V+TL+QLIKTQLQLNEKLT L
Sbjct: 238 MTHEQFTQMFNANVRNLLLVITLSQLIKTQLQLNEKLTFL 277


>AE014297-137|AAF52101.1|  280|Drosophila melanogaster CG9769-PA
           protein.
          Length = 280

 Score =  236 bits (578), Expect = 2e-62
 Identities = 118/220 (53%), Positives = 144/220 (65%), Gaps = 2/220 (0%)
 Frame = -3

Query: 722 HADQVEAELNYAMDVYELNRRVNSSESIVGXWATGNEVTNHSSVIHEYYSRECREPVHVT 543
           H DQVEAEL+YA+D+Y+LNR+VNS+ES+VG WATGN+VTNHSSVIHEYY+REC  PVH+T
Sbjct: 58  HDDQVEAELSYALDMYDLNRKVNSNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLT 117

Query: 542 LDTSLAGGRMGLRAYVCVPLGVPNGKQGCMFTPVDVTLTCYEPEIVGLQVCQKT-XXXXX 366
           +DTSL GGRMGLRAYVC+ LGVP GK GCMFTP+ V LT YEPE  GL++ QKT      
Sbjct: 118 VDTSLQGGRMGLRAYVCIQLGVPGGKSGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPA 177

Query: 365 XXXXXXXXXSDLAQVM-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLQLAHSAPD 189
                     DLAQ+                                   LL L HS P 
Sbjct: 178 HRPKTVPPMLDLAQISEASTKLQSLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPH 237

Query: 188 LAKDTFSDAFASSVKDLLMVVTLAQLIKTQLQLNEKLTLL 69
           +  + F+  F ++V++LL+V+TL+QLIKTQLQLNEKLT L
Sbjct: 238 MTHEQFTQMFNANVRNLLLVITLSQLIKTQLQLNEKLTFL 277


>AE013599-160|AAF57273.2|  286|Drosophila melanogaster CG8335-PA
           protein.
          Length = 286

 Score =  107 bits (257), Expect = 2e-23
 Identities = 65/221 (29%), Positives = 110/221 (49%), Gaps = 3/221 (1%)
 Frame = -3

Query: 713 QVEAELNYAMDVYELNRRVNSSESIVGXWATGNEVTNHSSVIHEYYSRECRE--PVHVTL 540
           +++ ++ YA +V ELN     +E ++G + TG  V+  +S+IH+YY REC E  P+H+ +
Sbjct: 67  RIDLDMAYASEVLELNMFAYPNERVLGWFCTGKSVSRSASLIHDYYVRECCEGQPLHLLV 126

Query: 539 DTSLAGGRMGLRAYVCVPLGVPNGKQGCMFTPVDVTLTCYEPEIVGLQVCQKTXXXXXXX 360
           D +L   R+  R Y  V +GVP G +G MF+ V + ++    ++V L+ C +        
Sbjct: 127 DAALKNQRLSTRLYCAVEMGVPGGTKGLMFSLVPLEISNENSDLVALR-CIEKQSQQQAS 185

Query: 359 XXXXXXXSDLAQVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLQLAHSA-PDLA 183
                   +LAQV+                                  L  A +A P L 
Sbjct: 186 KQMERFVPELAQVVDATRDMQHRLDLVLRYINDVLARKKKPDNVVGRSLYAALTAVPLLD 245

Query: 182 KDTFSDAFASSVKDLLMVVTLAQLIKTQLQLNEKLTLLTSQ 60
            D F   F ++++D+LM +TL+ +IKTQL+++EKL+ +  Q
Sbjct: 246 SDKFRVMFNTNLRDMLMAITLSTMIKTQLEISEKLSCMQDQ 286


>AY089283-1|AAL90021.1|  338|Drosophila melanogaster AT07973p
           protein.
          Length = 338

 Score = 37.1 bits (82), Expect = 0.024
 Identities = 19/69 (27%), Positives = 35/69 (50%)
 Frame = -3

Query: 695 NYAMDVYELNRRVNSSESIVGXWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGR 516
           +Y  ++Y + ++VN+ E +VG + TG ++  +   I+E   R C   V V +D       
Sbjct: 76  DYLENMYGMFKKVNARERVVGWYHTGPKLHQNDIAINELVRRYCPNSVLVIIDAKPKDLG 135

Query: 515 MGLRAYVCV 489
           +   AY+ V
Sbjct: 136 LPTEAYISV 144


>AE013599-3862|AAF47199.1|  338|Drosophila melanogaster CG3416-PA
           protein.
          Length = 338

 Score = 37.1 bits (82), Expect = 0.024
 Identities = 19/69 (27%), Positives = 35/69 (50%)
 Frame = -3

Query: 695 NYAMDVYELNRRVNSSESIVGXWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGR 516
           +Y  ++Y + ++VN+ E +VG + TG ++  +   I+E   R C   V V +D       
Sbjct: 76  DYLENMYGMFKKVNARERVVGWYHTGPKLHQNDIAINELVRRYCPNSVLVIIDAKPKDLG 135

Query: 515 MGLRAYVCV 489
           +   AY+ V
Sbjct: 136 LPTEAYISV 144


>M64643-1|AAA28695.1|  338|Drosophila melanogaster Mov34 protein.
          Length = 338

 Score = 33.1 bits (72), Expect = 0.39
 Identities = 14/47 (29%), Positives = 27/47 (57%)
 Frame = -3

Query: 695 NYAMDVYELNRRVNSSESIVGXWATGNEVTNHSSVIHEYYSRECREP 555
           +Y  ++Y + ++VN+ E +VG + TG ++  +   I+E   R C  P
Sbjct: 76  DYLENMYGMFKKVNARERVVGWYHTGPKLHQNDIAINELVRRYCPTP 122


>BT011129-1|AAR82796.1|  418|Drosophila melanogaster HL04005p
           protein.
          Length = 418

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = +1

Query: 478 TPNGTQTYARKPIRPPASEVSRVTWTG 558
           T NG Q   RKP  PP +EV  V  TG
Sbjct: 93  THNGQQVECRKPFHPPGTEVKFVCSTG 119


>AY118964-1|AAM50824.1|  628|Drosophila melanogaster LD43740p
           protein.
          Length = 628

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = +1

Query: 478 TPNGTQTYARKPIRPPASEVSRVTWTG 558
           T NG Q   RKP  PP +EV  V  TG
Sbjct: 303 THNGQQVECRKPFHPPGTEVKFVCSTG 329


>AE014297-2255|AAF55354.2|  628|Drosophila melanogaster CG31217-PA
           protein.
          Length = 628

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = +1

Query: 478 TPNGTQTYARKPIRPPASEVSRVTWTG 558
           T NG Q   RKP  PP +EV  V  TG
Sbjct: 303 THNGQQVECRKPFHPPGTEVKFVCSTG 329


>AE014297-4132|AAF56717.2|  403|Drosophila melanogaster CG31059-PA
           protein.
          Length = 403

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -1

Query: 520 VEWVYVHMFVYHWECQMESKVACSLL*MSL 431
           V W Y++ F+Y   CQ E  + CS L ++L
Sbjct: 275 VNWAYINKFLYDSCCQYERFLVCSTLLVNL 304


>U09373-1|AAA83413.1|  745|Drosophila melanogaster
           N-ethylmaleimide-sensitive fusionprotein protein.
          Length = 745

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = +3

Query: 519 TSSQRSVQSNMDRLTAFTGIILVYNRGVVGYFIASRPXTNNTFRG 653
           TSS+R V   M+ LTAFT ++ V N     + +A    T+   +G
Sbjct: 645 TSSRREVLEEMEMLTAFTSVLHVPNLSKPDHVLAVLENTDIFSKG 689


>BT023938-1|ABB36442.1| 1103|Drosophila melanogaster RE04201p
           protein.
          Length = 1103

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
 Frame = -3

Query: 497 VCVPLGVPNGKQ--GCMFTPVDVTLTCYEPEIVGLQVC 390
           VC P  VP   Q  G  FT  +VTL   +P   G  +C
Sbjct: 557 VCTPAAVPGAPQMQGYEFTAQEVTLNWTQPAAHGSPIC 594


>BT010259-1|AAQ23577.1|  745|Drosophila melanogaster RE33604p
           protein.
          Length = 745

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = +3

Query: 519 TSSQRSVQSNMDRLTAFTGIILVYNRGVVGYFIASRPXTNNTFRG 653
           TSS+R V   M+ LTAFT ++ V N     + +A    T+   +G
Sbjct: 645 TSSRREVLEEMEMLTAFTSVLHVPNLSKPDHVLAVLENTDIFSKG 689


>AY094813-1|AAM11166.1| 1413|Drosophila melanogaster LD30602p
           protein.
          Length = 1413

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
 Frame = -3

Query: 497 VCVPLGVPNGKQ--GCMFTPVDVTLTCYEPEIVGLQVC 390
           VC P  VP   Q  G  FT  +VTL   +P   G  +C
Sbjct: 867 VCTPAAVPGAPQMQGYEFTAQEVTLNWTQPAAHGSPIC 904


>AE014298-1870|AAF48244.2|  745|Drosophila melanogaster CG1618-PA
           protein.
          Length = 745

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = +3

Query: 519 TSSQRSVQSNMDRLTAFTGIILVYNRGVVGYFIASRPXTNNTFRG 653
           TSS+R V   M+ LTAFT ++ V N     + +A    T+   +G
Sbjct: 645 TSSRREVLEEMEMLTAFTSVLHVPNLSKPDHVLAVLENTDIFSKG 689


>AE014134-2739|AAF53547.2| 1413|Drosophila melanogaster CG31738-PA,
           isoform A protein.
          Length = 1413

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
 Frame = -3

Query: 497 VCVPLGVPNGKQ--GCMFTPVDVTLTCYEPEIVGLQVC 390
           VC P  VP   Q  G  FT  +VTL   +P   G  +C
Sbjct: 867 VCTPAAVPGAPQMQGYEFTAQEVTLNWTQPAAHGSPIC 904


>AE014134-2738|AAF53546.3| 1700|Drosophila melanogaster CG31738-PB,
            isoform B protein.
          Length = 1700

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
 Frame = -3

Query: 497  VCVPLGVPNGKQ--GCMFTPVDVTLTCYEPEIVGLQVC 390
            VC P  VP   Q  G  FT  +VTL   +P   G  +C
Sbjct: 1154 VCTPAAVPGAPQMQGYEFTAQEVTLNWTQPAAHGSPIC 1191


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,489,950
Number of Sequences: 53049
Number of extensions: 560688
Number of successful extensions: 1640
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1639
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)