Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11l02f
         (595 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    24   0.84 
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   4.5  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   4.5  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    22   4.5  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   5.9  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   5.9  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   7.8  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 0.84
 Identities = 7/18 (38%), Positives = 16/18 (88%)
 Frame = +2

Query: 83  NSTIWYVFNSIVNLRRYF 136
           N+TI+ +F+S++ ++R+F
Sbjct: 158 NTTIFLIFHSVLPIKRFF 175


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 16/57 (28%), Positives = 26/57 (45%)
 Frame = +2

Query: 62  Y*LITFINSTIWYVFNSIVNLRRYFFICHCRCTGNLLSYFTE*LKWRPKL*SLLNPI 232
           Y ++  I    WY  N+  N+     IC+   T   +SY  E LK   ++  L++ I
Sbjct: 256 YMIVYIIVVIFWYTVNASTNIFLCDEICNEGQTILGISYSLEKLKTGDEIQDLISTI 312


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 16/57 (28%), Positives = 26/57 (45%)
 Frame = +2

Query: 62  Y*LITFINSTIWYVFNSIVNLRRYFFICHCRCTGNLLSYFTE*LKWRPKL*SLLNPI 232
           Y ++  I    WY  N+  N+     IC+   T   +SY  E LK   ++  L++ I
Sbjct: 256 YMIVYIIVVIFWYTVNASTNIFLCDEICNEGQTILGISYSLEKLKTGDEIQDLISTI 312


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 15/73 (20%), Positives = 31/73 (42%)
 Frame = +1

Query: 367 ISDAYENHKKTEENEILSKGQEVSGNIFYMKQNISNACGTIALVHSVANNTDIIELSDGH 546
           +SD   ++K   E     +   ++ ++  +K  I +A       HS     DI+E++  H
Sbjct: 31  VSDNRRSNKPIMEKR---RRARINNSLNELKTLILDAMKKDPARHSKLEKADILEMTVKH 87

Query: 547 MQKFLNEAKGLDA 585
           +Q    +   + A
Sbjct: 88  LQNLQRQQAAMSA 100


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 272 GTPSFCKNLFRTSGLD 225
           G P+F + +F+ SGLD
Sbjct: 507 GHPNFFRIVFQNSGLD 522


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/31 (25%), Positives = 18/31 (58%)
 Frame = +1

Query: 415 LSKGQEVSGNIFYMKQNISNACGTIALVHSV 507
           L KG+++  N++Y+   + N    + L ++V
Sbjct: 89  LLKGRKIRKNLYYLLLFVINVLYVLTLCYAV 119


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 305 SPMTSTIFHLFGTPSFCKNLFRTSGLDSRG 216
           SP+++ I H   TP    N + + G   RG
Sbjct: 81  SPISNRIRHEMATPMATMNSYGSVGTLGRG 110


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,334
Number of Sequences: 336
Number of extensions: 3150
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)