Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11l02f
(595 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF145600-1|AAD38575.1| 227|Drosophila melanogaster ubiquitin ca... 132 5e-31
AE014134-356|AAF51291.1| 227|Drosophila melanogaster CG4265-PA ... 132 5e-31
X69679-1|CAA49359.1| 227|Drosophila melanogaster ubiquitin carb... 129 2e-30
X69678-1|CAA49358.1| 227|Drosophila melanogaster Ubiquitin carb... 129 2e-30
S60346-1|AAA15411.1| 227|Drosophila melanogaster ubiquitin carb... 129 2e-30
BT001294-1|AAN71049.1| 324|Drosophila melanogaster AT10619p pro... 36 0.031
AF145312-1|AAF08393.1| 324|Drosophila melanogaster 26S proteaso... 36 0.031
AF132567-1|AAD27866.1| 324|Drosophila melanogaster LD24440p pro... 36 0.031
AE014296-1671|AAF50257.1| 324|Drosophila melanogaster CG3431-PA... 36 0.031
AY047515-1|AAK77247.1| 471|Drosophila melanogaster GH01941p pro... 34 0.17
AE013599-2214|AAO41384.1| 471|Drosophila melanogaster CG8445-PB... 34 0.17
AE013599-2213|AAF58046.1| 471|Drosophila melanogaster CG8445-PA... 34 0.17
AY119533-1|AAM50187.1| 1058|Drosophila melanogaster GH18077p pro... 31 0.89
AE014134-2086|AAF53112.4| 1058|Drosophila melanogaster CG6614-PA... 31 0.89
BT024208-1|ABC86270.1| 887|Drosophila melanogaster RE41602p pro... 29 6.3
AE014297-4288|AAN14304.2| 983|Drosophila melanogaster CG33553-P... 29 6.3
BT023711-1|AAY85111.1| 307|Drosophila melanogaster GH25024p pro... 28 8.3
AE014296-2269|AAF49823.2| 307|Drosophila melanogaster CG10222-P... 28 8.3
>AF145600-1|AAD38575.1| 227|Drosophila melanogaster ubiquitin
carboxy-terminal hydrolaseprotein.
Length = 227
Score = 132 bits (318), Expect = 5e-31
Identities = 58/129 (44%), Positives = 86/129 (66%)
Frame = +1
Query: 208 TLVPLESNPDVLNKFLQKLGVPNKWNIVDVMGLDPETLSWVPRPVLSVMLLFPISDAYEN 387
T PLESNP+VL K++ KLGV W++ DV+GL+ +TL W+PRPV + +LLFP S+ YE
Sbjct: 3 TWTPLESNPEVLTKYIHKLGVSPAWSVTDVIGLEDDTLEWIPRPVKAFILLFPCSETYEK 62
Query: 388 HKKTEENEILSKGQEVSGNIFYMKQNISNACGTIALVHSVANNTDIIELSDGHMQKFLNE 567
H+ E + I ++ ++FYM+Q NACGT+AL+HSVANN + +++ G ++ FL +
Sbjct: 63 HRAEEHDRIKEVEEQHPEDLFYMRQFTHNACGTVALIHSVANNKE-VDIDRGVLKDFLEK 121
Query: 568 AKGLDATAR 594
L R
Sbjct: 122 TASLSPEER 130
>AE014134-356|AAF51291.1| 227|Drosophila melanogaster CG4265-PA
protein.
Length = 227
Score = 132 bits (318), Expect = 5e-31
Identities = 58/129 (44%), Positives = 86/129 (66%)
Frame = +1
Query: 208 TLVPLESNPDVLNKFLQKLGVPNKWNIVDVMGLDPETLSWVPRPVLSVMLLFPISDAYEN 387
T PLESNP+VL K++ KLGV W++ DV+GL+ +TL W+PRPV + +LLFP S+ YE
Sbjct: 3 TWTPLESNPEVLTKYIHKLGVSPAWSVTDVIGLEDDTLEWIPRPVKAFILLFPCSETYEK 62
Query: 388 HKKTEENEILSKGQEVSGNIFYMKQNISNACGTIALVHSVANNTDIIELSDGHMQKFLNE 567
H+ E + I ++ ++FYM+Q NACGT+AL+HSVANN + +++ G ++ FL +
Sbjct: 63 HRAEEHDRIKEVEEQHPEDLFYMRQFTHNACGTVALIHSVANNKE-VDIDRGVLKDFLEK 121
Query: 568 AKGLDATAR 594
L R
Sbjct: 122 TASLSPEER 130
>X69679-1|CAA49359.1| 227|Drosophila melanogaster ubiquitin
carboxyl terminal hydrolaseprotein.
Length = 227
Score = 129 bits (312), Expect = 2e-30
Identities = 57/129 (44%), Positives = 85/129 (65%)
Frame = +1
Query: 208 TLVPLESNPDVLNKFLQKLGVPNKWNIVDVMGLDPETLSWVPRPVLSVMLLFPISDAYEN 387
T PLESNP+VL K++ KL V W++ DV+GL+ +TL W+PRPV + +LLFP S+ YE
Sbjct: 3 TWTPLESNPEVLTKYIHKLAVSPAWSVTDVIGLEDDTLEWIPRPVKAFILLFPCSETYEK 62
Query: 388 HKKTEENEILSKGQEVSGNIFYMKQNISNACGTIALVHSVANNTDIIELSDGHMQKFLNE 567
H+ E + I ++ ++FYM+Q NACGT+AL+HSVANN + +++ G ++ FL +
Sbjct: 63 HRTEEHDRIKEVEEQHPEDLFYMRQFTHNACGTVALIHSVANNKE-VDIDRGVLKDFLEK 121
Query: 568 AKGLDATAR 594
L R
Sbjct: 122 TASLSPEER 130
>X69678-1|CAA49358.1| 227|Drosophila melanogaster Ubiquitin
carboxyl terminal hydrolaseprotein.
Length = 227
Score = 129 bits (312), Expect = 2e-30
Identities = 57/129 (44%), Positives = 85/129 (65%)
Frame = +1
Query: 208 TLVPLESNPDVLNKFLQKLGVPNKWNIVDVMGLDPETLSWVPRPVLSVMLLFPISDAYEN 387
T PLESNP+VL K++ KL V W++ DV+GL+ +TL W+PRPV + +LLFP S+ YE
Sbjct: 3 TWTPLESNPEVLTKYIHKLAVSPAWSVTDVIGLEDDTLEWIPRPVKAFILLFPCSETYEK 62
Query: 388 HKKTEENEILSKGQEVSGNIFYMKQNISNACGTIALVHSVANNTDIIELSDGHMQKFLNE 567
H+ E + I ++ ++FYM+Q NACGT+AL+HSVANN + +++ G ++ FL +
Sbjct: 63 HRTEEHDRIKEVEEQHPEDLFYMRQFTHNACGTVALIHSVANNKE-VDIDRGVLKDFLEK 121
Query: 568 AKGLDATAR 594
L R
Sbjct: 122 TASLSPEER 130
>S60346-1|AAA15411.1| 227|Drosophila melanogaster ubiquitin
carboxyl terminal hydrolaseprotein.
Length = 227
Score = 129 bits (312), Expect = 2e-30
Identities = 57/129 (44%), Positives = 85/129 (65%)
Frame = +1
Query: 208 TLVPLESNPDVLNKFLQKLGVPNKWNIVDVMGLDPETLSWVPRPVLSVMLLFPISDAYEN 387
T PLESNP+VL K++ KL V W++ DV+GL+ +TL W+PRPV + +LLFP S+ YE
Sbjct: 3 TWTPLESNPEVLTKYIHKLAVSPAWSVTDVIGLEDDTLEWIPRPVKAFILLFPCSETYEK 62
Query: 388 HKKTEENEILSKGQEVSGNIFYMKQNISNACGTIALVHSVANNTDIIELSDGHMQKFLNE 567
H+ E + I ++ ++FYM+Q NACGT+AL+HSVANN + +++ G ++ FL +
Sbjct: 63 HRTEEHDRIKEVEEQHPEDLFYMRQFTHNACGTVALIHSVANNKE-VDIDRGVLKDFLEK 121
Query: 568 AKGLDATAR 594
L R
Sbjct: 122 TASLSPEER 130
>BT001294-1|AAN71049.1| 324|Drosophila melanogaster AT10619p
protein.
Length = 324
Score = 36.3 bits (80), Expect = 0.031
Identities = 27/98 (27%), Positives = 48/98 (48%)
Frame = +1
Query: 220 LESNPDVLNKFLQKLGVPNKWNIVDVMGLDPETLSWVPRPVLSVMLLFPISDAYENHKKT 399
+ES+P V + +++ G + ++ LD E+ + P+ ++ LF K
Sbjct: 11 IESDPGVFTELIREFGCDGA-QVEEIWSLDSESFKNL-EPIHGLIFLF---------KWV 59
Query: 400 EENEILSKGQEVSGNIFYMKQNISNACGTIALVHSVAN 513
+E+E K NIF+ KQ I+NAC T A++ + N
Sbjct: 60 QEDEPAGKVVLDRENIFFAKQVINNACATQAILSLLMN 97
>AF145312-1|AAF08393.1| 324|Drosophila melanogaster 26S proteasome
regulatory complexsubunit p37A protein.
Length = 324
Score = 36.3 bits (80), Expect = 0.031
Identities = 27/98 (27%), Positives = 48/98 (48%)
Frame = +1
Query: 220 LESNPDVLNKFLQKLGVPNKWNIVDVMGLDPETLSWVPRPVLSVMLLFPISDAYENHKKT 399
+ES+P V + +++ G + ++ LD E+ + P+ ++ LF K
Sbjct: 11 IESDPGVFTELIREFGCDGA-QVEEIWSLDSESFKNL-EPIHGLIFLF---------KWV 59
Query: 400 EENEILSKGQEVSGNIFYMKQNISNACGTIALVHSVAN 513
+E+E K NIF+ KQ I+NAC T A++ + N
Sbjct: 60 QEDEPAGKVVLDRENIFFAKQVINNACATQAILSLLMN 97
>AF132567-1|AAD27866.1| 324|Drosophila melanogaster LD24440p
protein.
Length = 324
Score = 36.3 bits (80), Expect = 0.031
Identities = 27/98 (27%), Positives = 48/98 (48%)
Frame = +1
Query: 220 LESNPDVLNKFLQKLGVPNKWNIVDVMGLDPETLSWVPRPVLSVMLLFPISDAYENHKKT 399
+ES+P V + +++ G + ++ LD E+ + P+ ++ LF K
Sbjct: 11 IESDPGVFTELIREFGCDGA-QVEEIWSLDSESFKNL-EPIHGLIFLF---------KWV 59
Query: 400 EENEILSKGQEVSGNIFYMKQNISNACGTIALVHSVAN 513
+E+E K NIF+ KQ I+NAC T A++ + N
Sbjct: 60 QEDEPAGKVVLDRENIFFAKQVINNACATQAILSLLMN 97
>AE014296-1671|AAF50257.1| 324|Drosophila melanogaster CG3431-PA
protein.
Length = 324
Score = 36.3 bits (80), Expect = 0.031
Identities = 27/98 (27%), Positives = 48/98 (48%)
Frame = +1
Query: 220 LESNPDVLNKFLQKLGVPNKWNIVDVMGLDPETLSWVPRPVLSVMLLFPISDAYENHKKT 399
+ES+P V + +++ G + ++ LD E+ + P+ ++ LF K
Sbjct: 11 IESDPGVFTELIREFGCDGA-QVEEIWSLDSESFKNL-EPIHGLIFLF---------KWV 59
Query: 400 EENEILSKGQEVSGNIFYMKQNISNACGTIALVHSVAN 513
+E+E K NIF+ KQ I+NAC T A++ + N
Sbjct: 60 QEDEPAGKVVLDRENIFFAKQVINNACATQAILSLLMN 97
>AY047515-1|AAK77247.1| 471|Drosophila melanogaster GH01941p
protein.
Length = 471
Score = 33.9 bits (74), Expect = 0.17
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 2/122 (1%)
Frame = +1
Query: 220 LESNPDVLNKFLQKLGVPNKWNIVDVMGLDPETLSWVPRPVLSVMLLFPISDAYENHKKT 399
LES+P + L+ G + + +V L + P + L I + K
Sbjct: 49 LESDPGLFTLLLKDFGCHDV-QVEEVYDLQKP----IESPYGFIFLFRWIEERRARRKIV 103
Query: 400 EEN-EILSKGQEVSGNIFYMKQNISNACGTIALVHSVAN-NTDIIELSDGHMQKFLNEAK 573
E EI K +E +IF+ +Q + N+C T AL+ + N N + ++L D + + K
Sbjct: 104 ETTAEIFVKDEEAISSIFFAQQVVPNSCATHALLSVLLNCNENNLQLGD-TLSRLKTHTK 162
Query: 574 GL 579
G+
Sbjct: 163 GM 164
>AE013599-2214|AAO41384.1| 471|Drosophila melanogaster CG8445-PB,
isoform B protein.
Length = 471
Score = 33.9 bits (74), Expect = 0.17
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 2/122 (1%)
Frame = +1
Query: 220 LESNPDVLNKFLQKLGVPNKWNIVDVMGLDPETLSWVPRPVLSVMLLFPISDAYENHKKT 399
LES+P + L+ G + + +V L + P + L I + K
Sbjct: 49 LESDPGLFTLLLKDFGCHDV-QVEEVYDLQKP----IESPYGFIFLFRWIEERRARRKIV 103
Query: 400 EEN-EILSKGQEVSGNIFYMKQNISNACGTIALVHSVAN-NTDIIELSDGHMQKFLNEAK 573
E EI K +E +IF+ +Q + N+C T AL+ + N N + ++L D + + K
Sbjct: 104 ETTAEIFVKDEEAISSIFFAQQVVPNSCATHALLSVLLNCNENNLQLGD-TLSRLKTHTK 162
Query: 574 GL 579
G+
Sbjct: 163 GM 164
>AE013599-2213|AAF58046.1| 471|Drosophila melanogaster CG8445-PA,
isoform A protein.
Length = 471
Score = 33.9 bits (74), Expect = 0.17
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 2/122 (1%)
Frame = +1
Query: 220 LESNPDVLNKFLQKLGVPNKWNIVDVMGLDPETLSWVPRPVLSVMLLFPISDAYENHKKT 399
LES+P + L+ G + + +V L + P + L I + K
Sbjct: 49 LESDPGLFTLLLKDFGCHDV-QVEEVYDLQKP----IESPYGFIFLFRWIEERRARRKIV 103
Query: 400 EEN-EILSKGQEVSGNIFYMKQNISNACGTIALVHSVAN-NTDIIELSDGHMQKFLNEAK 573
E EI K +E +IF+ +Q + N+C T AL+ + N N + ++L D + + K
Sbjct: 104 ETTAEIFVKDEEAISSIFFAQQVVPNSCATHALLSVLLNCNENNLQLGD-TLSRLKTHTK 162
Query: 574 GL 579
G+
Sbjct: 163 GM 164
>AY119533-1|AAM50187.1| 1058|Drosophila melanogaster GH18077p protein.
Length = 1058
Score = 31.5 bits (68), Expect = 0.89
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = -1
Query: 448 KYFQKLLALWTESHFLQFFCDFRKHQKLGKVALQKAQGEVPTKAFQDQVP 299
KYFQ+LL++ L F F + LG++ALQ+ Q E+ KAF +P
Sbjct: 900 KYFQELLSVVDPMDNLLFKLSFLR---LGQLALQRKQYELAEKAFNICLP 946
>AE014134-2086|AAF53112.4| 1058|Drosophila melanogaster CG6614-PA
protein.
Length = 1058
Score = 31.5 bits (68), Expect = 0.89
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = -1
Query: 448 KYFQKLLALWTESHFLQFFCDFRKHQKLGKVALQKAQGEVPTKAFQDQVP 299
KYFQ+LL++ L F F + LG++ALQ+ Q E+ KAF +P
Sbjct: 900 KYFQELLSVVDPMDNLLFKLSFLR---LGQLALQRKQYELAEKAFNICLP 946
>BT024208-1|ABC86270.1| 887|Drosophila melanogaster RE41602p
protein.
Length = 887
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 322 SWVPRPVLSVMLLFPISDAYENHKKTE 402
SW P+P+ +L P +D NH+K +
Sbjct: 502 SWAPKPLYPDRVLLPPADGNNNHQKQQ 528
>AE014297-4288|AAN14304.2| 983|Drosophila melanogaster CG33553-PE,
isoform E protein.
Length = 983
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 322 SWVPRPVLSVMLLFPISDAYENHKKTE 402
SW P+P+ +L P +D NH+K +
Sbjct: 502 SWAPKPLYPDRVLLPPADGNNNHQKQQ 528
>BT023711-1|AAY85111.1| 307|Drosophila melanogaster GH25024p
protein.
Length = 307
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 289 VDVMGLDPETLSWVPRPVLSVMLLFPISDAYENHK 393
V V+ LDP + PVLSVM L + D E+ K
Sbjct: 46 VGVVNLDPANENMSYEPVLSVMELITVEDCMEHLK 80
>AE014296-2269|AAF49823.2| 307|Drosophila melanogaster CG10222-PA
protein.
Length = 307
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 289 VDVMGLDPETLSWVPRPVLSVMLLFPISDAYENHK 393
V V+ LDP + PVLSVM L + D E+ K
Sbjct: 46 VGVVNLDPANENMSYEPVLSVMELITVEDCMEHLK 80
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,541,403
Number of Sequences: 53049
Number of extensions: 525396
Number of successful extensions: 1312
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1312
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2400202284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -