Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11l01f
         (335 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF043443-1|AAC05668.1|  232|Anopheles gambiae putative pupal-spe...    27   0.25 
AF043442-1|AAC05667.1|  231|Anopheles gambiae putative pupal-spe...    27   0.25 
AF043441-1|AAC05666.1|  231|Anopheles gambiae putative pupal-spe...    27   0.25 
AF043440-1|AAC05665.1|  234|Anopheles gambiae putative pupal-spe...    27   0.25 
AF043438-1|AAC05663.1|  231|Anopheles gambiae putative pupal-spe...    27   0.25 
AF043437-1|AAC05662.1|  239|Anopheles gambiae putative pupal-spe...    27   0.25 
AF043436-1|AAC05661.1|  263|Anopheles gambiae putative pupal-spe...    27   0.25 
AF043435-1|AAC05660.1|  231|Anopheles gambiae pupal-specific cut...    27   0.25 
AF043434-1|AAC05659.1|  232|Anopheles gambiae putative pupal-spe...    27   0.25 
AF043433-3|AAC05658.1|  231|Anopheles gambiae putative pupal-spe...    27   0.25 
AF043433-2|AAC05657.1|  239|Anopheles gambiae putative pupal-spe...    27   0.25 
AF043433-1|AAC05656.1|  231|Anopheles gambiae putative pupal-spe...    27   0.25 
AF043439-1|AAC05664.1|  239|Anopheles gambiae putative pupal-spe...    26   0.33 
AY313948-1|AAP76391.1|  424|Anopheles gambiae cytochrome P450 CY...    24   1.8  
U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles ...    23   3.1  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   3.1  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   4.1  

>AF043443-1|AAC05668.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 26.6 bits (56), Expect = 0.25
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +1

Query: 19  VRGSYSYTNTDGKPETITYFAD-ETGYHA 102
           V G YS  ++DG    + Y AD  TG++A
Sbjct: 118 VHGQYSLLDSDGHQRIVDYHADHHTGFNA 146


>AF043442-1|AAC05667.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2c protein.
          Length = 231

 Score = 26.6 bits (56), Expect = 0.25
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +1

Query: 19  VRGSYSYTNTDGKPETITYFAD-ETGYHA 102
           V G YS  ++DG    + Y AD  TG++A
Sbjct: 110 VHGQYSLLDSDGHQRIVDYHADHHTGFNA 138


>AF043441-1|AAC05666.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 231

 Score = 26.6 bits (56), Expect = 0.25
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +1

Query: 19  VRGSYSYTNTDGKPETITYFAD-ETGYHA 102
           V G YS  ++DG    + Y AD  TG++A
Sbjct: 110 VHGQYSLLDSDGHQRIVDYHADHHTGFNA 138


>AF043440-1|AAC05665.1|  234|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 234

 Score = 26.6 bits (56), Expect = 0.25
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +1

Query: 19  VRGSYSYTNTDGKPETITYFAD-ETGYHA 102
           V G YS  ++DG    + Y AD  TG++A
Sbjct: 110 VHGQYSLLDSDGHQRIVDYHADHHTGFNA 138


>AF043438-1|AAC05663.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 231

 Score = 26.6 bits (56), Expect = 0.25
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +1

Query: 19  VRGSYSYTNTDGKPETITYFAD-ETGYHA 102
           V G YS  ++DG    + Y AD  TG++A
Sbjct: 110 VHGQYSLLDSDGHQRIVDYHADHHTGFNA 138


>AF043437-1|AAC05662.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score = 26.6 bits (56), Expect = 0.25
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +1

Query: 19  VRGSYSYTNTDGKPETITYFAD-ETGYHA 102
           V G YS  ++DG    + Y AD  TG++A
Sbjct: 118 VHGQYSLLDSDGHQRIVDYHADHHTGFNA 146


>AF043436-1|AAC05661.1|  263|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2c protein.
          Length = 263

 Score = 26.6 bits (56), Expect = 0.25
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +1

Query: 19  VRGSYSYTNTDGKPETITYFAD-ETGYHA 102
           V G YS  ++DG    + Y AD  TG++A
Sbjct: 142 VHGQYSLLDSDGHQRIVDYHADHHTGFNA 170


>AF043435-1|AAC05660.1|  231|Anopheles gambiae pupal-specific
           cuticular protein CP2b protein.
          Length = 231

 Score = 26.6 bits (56), Expect = 0.25
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +1

Query: 19  VRGSYSYTNTDGKPETITYFAD-ETGYHA 102
           V G YS  ++DG    + Y AD  TG++A
Sbjct: 110 VHGQYSLLDSDGHQRIVDYHADHHTGFNA 138


>AF043434-1|AAC05659.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 26.6 bits (56), Expect = 0.25
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +1

Query: 19  VRGSYSYTNTDGKPETITYFAD-ETGYHA 102
           V G YS  ++DG    + Y AD  TG++A
Sbjct: 118 VHGQYSLLDSDGHQRIVDYHADHHTGFNA 146


>AF043433-3|AAC05658.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 231

 Score = 26.6 bits (56), Expect = 0.25
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +1

Query: 19  VRGSYSYTNTDGKPETITYFAD-ETGYHA 102
           V G YS  ++DG    + Y AD  TG++A
Sbjct: 110 VHGQYSLLDSDGHQRIVDYHADHHTGFNA 138


>AF043433-2|AAC05657.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 239

 Score = 26.6 bits (56), Expect = 0.25
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +1

Query: 19  VRGSYSYTNTDGKPETITYFAD-ETGYHA 102
           V G YS  ++DG    + Y AD  TG++A
Sbjct: 118 VHGQYSLLDSDGHQRIVDYHADHHTGFNA 146


>AF043433-1|AAC05656.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 231

 Score = 26.6 bits (56), Expect = 0.25
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +1

Query: 19  VRGSYSYTNTDGKPETITYFAD-ETGYHA 102
           V G YS  ++DG    + Y AD  TG++A
Sbjct: 110 VHGQYSLLDSDGHQRIVDYHADHHTGFNA 138


>AF043439-1|AAC05664.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score = 26.2 bits (55), Expect = 0.33
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +1

Query: 19  VRGSYSYTNTDGKPETITYFAD-ETGYHA 102
           V G YS  ++DG    + Y AD  TG++A
Sbjct: 118 VHGQYSLLDSDGHHRIVDYHADHHTGFNA 146


>AY313948-1|AAP76391.1|  424|Anopheles gambiae cytochrome P450
           CYP6M4 protein.
          Length = 424

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +3

Query: 177 EALIQDCVAKHPPHSL 224
           E ++++C+ KHPP S+
Sbjct: 297 ECVLKECLRKHPPISV 312


>U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles
           gambiae putativeribosomal protein S8 mRNA, complete cds.
           ).
          Length = 135

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
 Frame = -3

Query: 216 VVDASPHNPVLRLHYLNLSREFRSLARGGGD-LRNRFTLSMVSSLVSEVRN 67
           V+DASP       HYL    + R L  G  D L  + T S +   V   +N
Sbjct: 32  VIDASPFRQWYESHYLLPLGKKRELKAGEEDVLSKKRTKSNLRKYVKRQKN 82


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +3

Query: 162  IDLSNEALIQDCVAKHPPHSLVTRY 236
            + L N+  + DC     PH+++T+Y
Sbjct: 941  LSLENKPHVFDCYTTVIPHTVLTQY 965


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +2

Query: 86  RLDTMLRVNLFLRSPPPRAKLLN 154
           +LD +L +  FLR+ PP   LLN
Sbjct: 512 KLDLLL-LKAFLRNVPPNYNLLN 533


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 321,528
Number of Sequences: 2352
Number of extensions: 5376
Number of successful extensions: 69
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 69
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 23774685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)