Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11k20r
         (776 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    26   0.29 
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    26   0.29 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   4.8  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   4.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.3  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 12/51 (23%), Positives = 24/51 (47%)
 Frame = -3

Query: 741 WIILTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFYLHLFTY 589
           W  L++Y+   I    + +     ++N    ++ L   G SF+F++  F Y
Sbjct: 198 WTSLSVYHLVEISEIHFDLCQAADDLNRYFEVQVLTIFGVSFYFFISTFFY 248


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 12/51 (23%), Positives = 24/51 (47%)
 Frame = -3

Query: 741 WIILTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFYLHLFTY 589
           W  L++Y+   I    + +     ++N    ++ L   G SF+F++  F Y
Sbjct: 194 WTSLSVYHLVEISEIHFDLCQAADDLNRYFEVQVLTIFGVSFYFFISTFFY 244


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -3

Query: 762 SNNSNYYWIILTIYYTANIEIAFYRVNYICRN 667
           S N   + I+L + YT   E+  + + + C+N
Sbjct: 262 STNCPRFLIMLALSYTVIQEVMLFTILWNCQN 293


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -3

Query: 429 CNPLFRNYISKLNLRGIC 376
           CNP++  Y  K    G+C
Sbjct: 566 CNPIYDAYCQKHYANGLC 583


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -3

Query: 735  ILTIYYTANIEIAFYRVNYICRNVNY 658
            +  +YY    E+ FY  N+   ++NY
Sbjct: 1603 VAPLYYHPEDEVVFYNANF---SINY 1625


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,399
Number of Sequences: 336
Number of extensions: 2572
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)