Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11k20r
(776 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 25 1.0
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 25 1.0
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 25 1.0
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 25 1.0
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 23 3.2
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 23 3.2
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 23 3.2
AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor p... 22 5.5
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 22 5.5
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 7.3
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 7.3
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 7.3
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 7.3
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 22 7.3
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 7.3
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 9.7
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 21 9.7
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 24.6 bits (51), Expect = 1.0
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 759 NNSNYYWIILTIYYTANIEIAFYRVNYI 676
NN+NY + Y N + +Y +NYI
Sbjct: 92 NNNNYKYNYNNNNYNNNCKKLYYNINYI 119
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 24.6 bits (51), Expect = 1.0
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 759 NNSNYYWIILTIYYTANIEIAFYRVNYI 676
NN+NY + Y N + +Y +NYI
Sbjct: 92 NNNNYKYNYNNNNYNNNCKKLYYNINYI 119
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 24.6 bits (51), Expect = 1.0
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 759 NNSNYYWIILTIYYTANIEIAFYRVNYI 676
NN+NY + Y N + +Y +NYI
Sbjct: 92 NNNNYKYNYNNNNYNNNCKKLYYNINYI 119
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 24.6 bits (51), Expect = 1.0
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 759 NNSNYYWIILTIYYTANIEIAFYRVNYI 676
NN+NY + Y N + +Y +NYI
Sbjct: 92 NNNNYKYNYNNNNYNNNCKKLYYNINYI 119
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 3.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 498 HRLCLTLRSNIFLGGNRNYKSIICN 424
H++ +L SN + N NYK + CN
Sbjct: 79 HKIISSL-SNNYNYNNNNYKKLYCN 102
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 3.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 498 HRLCLTLRSNIFLGGNRNYKSIICN 424
H++ +L SN + N NYK + CN
Sbjct: 79 HKIISSL-SNNYNYNNNNYKKLYCN 102
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 3.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 498 HRLCLTLRSNIFLGGNRNYKSIICN 424
H++ +L SN + N NYK + CN
Sbjct: 79 HKIISSL-SNNYNYNNNNYKKLYCN 102
>AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor
protein.
Length = 139
Score = 22.2 bits (45), Expect = 5.5
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = -3
Query: 69 MIFFICLCNSSINP 28
++F++ CNS+INP
Sbjct: 46 VLFWLGYCNSAINP 59
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 22.2 bits (45), Expect = 5.5
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = -3
Query: 69 MIFFICLCNSSINP 28
++F++ CNS+INP
Sbjct: 494 VLFWLGYCNSAINP 507
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 7.3
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -3
Query: 552 ICMINWNYNFIYTNSNCFHRLCLTL 478
I ++ NYN+ N+N + +LC +
Sbjct: 82 ISSLSNNYNYSNYNNNNYKQLCYNI 106
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 7.3
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -3
Query: 552 ICMINWNYNFIYTNSNCFHRLCLTL 478
I ++ NYN+ N+N + +LC +
Sbjct: 82 ISSLSNNYNYSNYNNNNYKQLCYNI 106
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 7.3
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -3
Query: 552 ICMINWNYNFIYTNSNCFHRLCLTL 478
I ++ NYN+ N+N + +LC +
Sbjct: 82 ISSLSNNYNYSNYNNNNYKQLCYNI 106
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 7.3
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -3
Query: 552 ICMINWNYNFIYTNSNCFHRLCLTL 478
I ++ NYN+ N+N + +LC +
Sbjct: 82 ISSLSNNYNYSNYNNNNYKQLCYNI 106
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 7.3
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -3
Query: 552 ICMINWNYNFIYTNSNCFHRLCLTL 478
I ++ NYN+ N+N + +LC +
Sbjct: 82 ISSLSNNYNYSNYNNNNYKQLCYNI 106
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 7.3
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -3
Query: 552 ICMINWNYNFIYTNSNCFHRLCLTL 478
I ++ NYN+ N+N + +LC +
Sbjct: 82 ISSLSNNYNYSNYNNNNYKQLCYNI 106
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.4 bits (43), Expect = 9.7
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 232 LSKFLFNPKGLLDPVW 279
L + F+ +GLL PVW
Sbjct: 213 LEELGFDTEGLLPPVW 228
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 21.4 bits (43), Expect = 9.7
Identities = 7/24 (29%), Positives = 15/24 (62%)
Frame = -3
Query: 729 TIYYTANIEIAFYRVNYICRNVNY 658
T++YT N+ + ++++C V Y
Sbjct: 233 TLFYTVNLILPTVLISFLCVLVFY 256
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,319
Number of Sequences: 438
Number of extensions: 3318
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24396777
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -