Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11k19r
(384 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P42766 Cluster: 60S ribosomal protein L35; n=81; Eukary... 124 4e-28
UniRef50_P34662 Cluster: 60S ribosomal protein L35; n=33; Eukary... 103 9e-22
UniRef50_Q4WT53 Cluster: 60S ribosomal protein L35; n=5; cellula... 95 3e-19
UniRef50_Q4PGL7 Cluster: Putative uncharacterized protein; n=1; ... 83 1e-15
UniRef50_Q4UIF8 Cluster: 60S ribosomal protein L35; n=6; Alveola... 79 2e-14
UniRef50_Q9U935 Cluster: Ag15 protein; n=7; Alveolata|Rep: Ag15 ... 73 2e-12
UniRef50_Q5CJ48 Cluster: 60S ribosomal protein L35; n=2; Cryptos... 72 4e-12
UniRef50_A0DBI8 Cluster: Chromosome undetermined scaffold_44, wh... 65 5e-10
UniRef50_Q4Q8V7 Cluster: 60S ribosomal protein L35, putative; n=... 63 2e-09
UniRef50_Q0D991 Cluster: Os06g0732000 protein; n=9; Oryza sativa... 56 2e-07
UniRef50_UPI00002376D7 Cluster: PREDICTED: similar to 60S riboso... 52 5e-06
UniRef50_Q7QRA8 Cluster: GLP_2_9191_9649; n=2; Giardia intestina... 49 3e-05
UniRef50_Q019M2 Cluster: DNAJ_NEIMB Chaperone protein dnaJ sp|P6... 45 6e-04
UniRef50_A2E6R2 Cluster: Ribosomal protein L29, putative; n=4; T... 45 6e-04
UniRef50_Q2KL02 Cluster: 60S ribosomal protein L35; n=1; Siniper... 43 0.002
UniRef50_Q8ST62 Cluster: Similarity to 60S ribosomal protein L35... 42 0.005
UniRef50_Q9UXG6 Cluster: Putative uncharacterized protein ORF-c4... 38 0.065
UniRef50_UPI0000EBD742 Cluster: PREDICTED: similar to 60S riboso... 37 0.11
UniRef50_A0D1A4 Cluster: Chromosome undetermined scaffold_34, wh... 35 0.61
UniRef50_A5BMW0 Cluster: Putative uncharacterized protein; n=1; ... 33 1.4
UniRef50_A6G958 Cluster: Putative uncharacterized protein; n=1; ... 33 1.9
UniRef50_UPI0000499951 Cluster: hypothetical protein 264.t00009;... 33 2.5
UniRef50_Q4Z2R9 Cluster: Putative uncharacterized protein; n=3; ... 33 2.5
UniRef50_Q7Z7F7 Cluster: 39S ribosomal protein L55, mitochondria... 33 2.5
UniRef50_UPI0000498AB1 Cluster: hypothetical protein 21.t00051; ... 32 3.3
UniRef50_UPI0000F1D785 Cluster: PREDICTED: similar to LOC553316 ... 31 7.5
UniRef50_Q8Y3Q8 Cluster: Lmo2775 protein; n=5; Listeria|Rep: Lmo... 31 7.5
UniRef50_Q4Y885 Cluster: Putative uncharacterized protein; n=7; ... 31 7.5
UniRef50_A7SHI3 Cluster: Predicted protein; n=1; Nematostella ve... 31 7.5
UniRef50_UPI0000F2ADF6 Cluster: PREDICTED: hypothetical protein;... 31 9.9
UniRef50_A5FGD8 Cluster: Phage integrase family protein; n=1; Fl... 31 9.9
>UniRef50_P42766 Cluster: 60S ribosomal protein L35; n=81;
Eukaryota|Rep: 60S ribosomal protein L35 - Homo sapiens
(Human)
Length = 123
Score = 124 bits (300), Expect = 4e-28
Identities = 66/113 (58%), Positives = 76/113 (67%)
Frame = -2
Query: 341 MGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 162
M K+K +LR K L+ LRVAKVTGG ASKLSKIRVVRK+IARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 161 YHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSL 3
+Q K NLR YK KKYKPLDLR KKTRAMR+ L KHE +KT+K+ RK+ L
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERL 113
>UniRef50_P34662 Cluster: 60S ribosomal protein L35; n=33;
Eukaryota|Rep: 60S ribosomal protein L35 -
Caenorhabditis elegans
Length = 123
Score = 103 bits (248), Expect = 9e-22
Identities = 55/110 (50%), Positives = 68/110 (61%)
Frame = -2
Query: 341 MGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 162
M K+KC LR + L LRV+KVTGG ASKLSKIRVVRK IAR+ V
Sbjct: 1 MTKLKCKSLRGEKKDALQKKLDEQKTELATLRVSKVTGGAASKLSKIRVVRKNIARLLTV 60
Query: 161 YHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRK 12
+Q K LR Y + KYKP+DLR KKTRA+R+ LT HE +++ K+ K
Sbjct: 61 INQTQKQELRKFYADHKYKPIDLRLKKTRAIRRRLTAHELSLRSAKQQAK 110
>UniRef50_Q4WT53 Cluster: 60S ribosomal protein L35; n=5; cellular
organisms|Rep: 60S ribosomal protein L35 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 203
Score = 95.5 bits (227), Expect = 3e-19
Identities = 52/116 (44%), Positives = 67/116 (57%)
Frame = -2
Query: 350 TVKMGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARV 171
T+ KVK +L K L+ LRV K+ G +SK +I VRK+IARV
Sbjct: 61 TMSTSKVKAGQLWGKSKEELSKQLEELKTELSQLRVQKIAAGASSKTQRIHDVRKSIARV 120
Query: 170 YIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSL 3
V + + LR YKNKKY PLDLR + TRA+R+ LTKHEA +KT K+ RKK +
Sbjct: 121 LTVINANQRAQLRLFYKNKKYTPLDLRPRLTRALRRRLTKHEATLKTEKQ-RKKEI 175
>UniRef50_Q4PGL7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 218
Score = 83.4 bits (197), Expect = 1e-15
Identities = 45/103 (43%), Positives = 61/103 (59%)
Frame = -2
Query: 332 VKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQ 153
VK EL++K L NLRV KV GG +SK+ +I +RK IARV V +Q
Sbjct: 77 VKTFELQSKSKTDLTKQLEELKTELLNLRVQKVAGGSSSKILRINSLRKDIARVLTVMNQ 136
Query: 152 KMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRK 24
K + NLR YK K PLDLRAKKTRA+R+ L + +++++
Sbjct: 137 KQRANLREFYKGKSQIPLDLRAKKTRAIRRKLNQQRFAMRSQR 179
>UniRef50_Q4UIF8 Cluster: 60S ribosomal protein L35; n=6;
Alveolata|Rep: 60S ribosomal protein L35 - Theileria
annulata
Length = 142
Score = 79.4 bits (187), Expect = 2e-14
Identities = 48/110 (43%), Positives = 61/110 (55%)
Frame = -2
Query: 335 KVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYH 156
K++ ELR K L RV+KVT SKLSKI +VRKA+A+V VY+
Sbjct: 22 KLRVFELRDKSDAELLKLLDDLKQELATFRVSKVTATGTSKLSKITLVRKAVAKVLTVYN 81
Query: 155 QKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKS 6
Q+ K R YK PL+LR K TRA RK LT + +KT KE RK++
Sbjct: 82 QRKKEEARKKYKKLSKTPLNLRPKLTRAKRKGLTTKQLTMKTIKE-RKRA 130
>UniRef50_Q9U935 Cluster: Ag15 protein; n=7; Alveolata|Rep: Ag15
protein - Plasmodium falciparum
Length = 124
Score = 72.9 bits (171), Expect = 2e-12
Identities = 45/110 (40%), Positives = 59/110 (53%)
Frame = -2
Query: 341 MGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 162
M VK ELRT L+ LR++K G A K SKI VRK +ARV V
Sbjct: 1 MSNVKAYELRTLKKKELLDKLDELKKELSGLRISKALGNSA-KNSKIHGVRKNVARVLTV 59
Query: 161 YHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRK 12
Y+QK K+ LR YKNKK+KP +LR K T+ R L+ + T ++ +K
Sbjct: 60 YNQKRKMELRQLYKNKKFKPYNLRKKLTKNKRLQLSPKQKAAMTLRQKKK 109
>UniRef50_Q5CJ48 Cluster: 60S ribosomal protein L35; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L35 -
Cryptosporidium hominis
Length = 126
Score = 71.7 bits (168), Expect = 4e-12
Identities = 38/81 (46%), Positives = 51/81 (62%)
Frame = -2
Query: 254 NLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTR 75
+LRV + TG +KLS+I VVRK IAR+ + Q+ +LR + K+ PLDLR K TR
Sbjct: 33 SLRVIQSTGTAPNKLSRINVVRKGIARILTILSQRNIKSLREKHAGSKFMPLDLRKKLTR 92
Query: 74 AMRKALTKHEAKIKTRKEIRK 12
A R+ALT +AK T K +K
Sbjct: 93 AKRRALTPQQAKKMTVKASKK 113
>UniRef50_A0DBI8 Cluster: Chromosome undetermined scaffold_44, whole
genome shotgun sequence; n=9; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_44, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 125
Score = 64.9 bits (151), Expect = 5e-10
Identities = 32/80 (40%), Positives = 53/80 (66%)
Frame = -2
Query: 251 LRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRA 72
LR KV+ G A KL +I +VRK IA+ V +++ + +++N K+ P+DLR KKTRA
Sbjct: 33 LRTVKVSAGNAQKLGRIGLVRKRIAKFLTVINEQRRNSVKNAAKSSTKLPVDLRGKKTRA 92
Query: 71 MRKALTKHEAKIKTRKEIRK 12
+R+ LT+ E KT+++ ++
Sbjct: 93 IRQRLTRSERAQKTQRQWKR 112
>UniRef50_Q4Q8V7 Cluster: 60S ribosomal protein L35, putative; n=5;
Trypanosomatidae|Rep: 60S ribosomal protein L35,
putative - Leishmania major
Length = 127
Score = 62.9 bits (146), Expect = 2e-09
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Frame = -2
Query: 332 VKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQ 153
+K +LR K L+ LRV + TGG ++L +IR +RK+IAR+ V +Q
Sbjct: 5 MKIKDLREKSKDDLLKTLTEYKKELSQLRVVQQTGGAETRLGRIRPIRKSIARILTVLNQ 64
Query: 152 KMKVNLRNHYKNKKYK---PLDLRAKKTRAMRKALTKHEAKIKTRKEIRK 12
+ NL+ Y ++K + P LR K T R AL ++E KT +++R+
Sbjct: 65 NERSNLKMFYADRKLRCKTPKVLRTKLTHRRRLALKENEKNRKTSRQMRQ 114
>UniRef50_Q0D991 Cluster: Os06g0732000 protein; n=9; Oryza
sativa|Rep: Os06g0732000 protein - Oryza sativa subsp.
japonica (Rice)
Length = 290
Score = 56.4 bits (130), Expect = 2e-07
Identities = 40/106 (37%), Positives = 53/106 (50%)
Frame = -2
Query: 353 VTVKMGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIAR 174
VTV M ++K LR ++ L+ LRVA+VTGG +KLS I+ VR A+
Sbjct: 104 VTVAMARIKVDVLRGRNKAELQAQLKDLKAELSVLRVARVTGGAPNKLSNIK-VRTALRE 162
Query: 173 VYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKI 36
Y K K PLDLR KKT A+R+ LTKH+ +
Sbjct: 163 AY-------------KKKKKSLLPLDLRPKKTCAIRRRLTKHQGML 195
>UniRef50_UPI00002376D7 Cluster: PREDICTED: similar to 60S ribosomal
protein L35; n=1; Homo sapiens|Rep: PREDICTED: similar
to 60S ribosomal protein L35 - Homo sapiens
Length = 106
Score = 51.6 bits (118), Expect = 5e-06
Identities = 24/48 (50%), Positives = 32/48 (66%)
Frame = -2
Query: 146 KVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSL 3
K NL YK KKYK L LR KKTRA+R+ L+KHE + +K+ + + L
Sbjct: 43 KENLGKFYKGKKYKHLHLRPKKTRAVRRPLSKHEENLTIKKQQQSEQL 90
>UniRef50_Q7QRA8 Cluster: GLP_2_9191_9649; n=2; Giardia
intestinalis|Rep: GLP_2_9191_9649 - Giardia lamblia ATCC
50803
Length = 152
Score = 48.8 bits (111), Expect = 3e-05
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = -2
Query: 254 NLRVAKVTGG-VASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKT 78
+LR K T G V ++++ RV +K +ARV V +QK + R ++ ++ P R + T
Sbjct: 58 SLRTMKATAGPVPERIARFRVCKKDVARVLTVINQKARDEARAAFEGAEHIPKTFRPRLT 117
Query: 77 RAMRKALTKHEAKIKTRKEIRKK 9
AMR LT+ + ++ K +++K
Sbjct: 118 HAMRCQLTEKQKRLLPSKLMKRK 140
>UniRef50_Q019M2 Cluster: DNAJ_NEIMB Chaperone protein dnaJ
sp|P63968|DNAJ_NEIMA Chaperone protein dnaJ
gb|AAF40528.1| dna; n=2; Ostreococcus|Rep: DNAJ_NEIMB
Chaperone protein dnaJ sp|P63968|DNAJ_NEIMA Chaperone
protein dnaJ gb|AAF40528.1| dna - Ostreococcus tauri
Length = 575
Score = 44.8 bits (101), Expect = 6e-04
Identities = 30/68 (44%), Positives = 33/68 (48%)
Frame = +1
Query: 46 SCLVRALRIARVFLALKSKGXXXXXXXXXXXXXXXXW*YTM*TRAIAFLTTRILDSLEAT 225
S LV+A R+ARVF KS G W T+ AIA T IL SL
Sbjct: 418 SDLVKARRMARVFFLRKSSGWYFAPSYADRKDANCLWRITVRVCAIANRTCLILLSLPGA 477
Query: 226 PPVTLATR 249
PPVTLATR
Sbjct: 478 PPVTLATR 485
>UniRef50_A2E6R2 Cluster: Ribosomal protein L29, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L29,
putative - Trichomonas vaginalis G3
Length = 124
Score = 44.8 bits (101), Expect = 6e-04
Identities = 30/110 (27%), Positives = 48/110 (43%)
Frame = -2
Query: 341 MGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 162
MG +K EL K L L+ K A+KL++I+ R+ +ARV +
Sbjct: 1 MGHLKGKELIKKTRQELLDELAGLEKKLFELKGQKAASAAATKLTEIKNTRRDVARVKSI 60
Query: 161 YHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRK 12
+ L+ Y K P+DLR + +++R L A T +E R+
Sbjct: 61 LMVSQRKALQEKYAKAKLVPIDLRKHQEKSLRNKLAPKYANKLTAQESRR 110
>UniRef50_Q2KL02 Cluster: 60S ribosomal protein L35; n=1; Siniperca
chuatsi|Rep: 60S ribosomal protein L35 - Siniperca
chuatsi (Chinese perch)
Length = 57
Score = 42.7 bits (96), Expect = 0.002
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = -2
Query: 107 KPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKK 9
KPLDLR KKTR +R+ L KHE ++T+K ++
Sbjct: 1 KPLDLRPKKTRVLRRRLNKHEESLRTKKTAEER 33
>UniRef50_Q8ST62 Cluster: Similarity to 60S ribosomal protein L35;
n=2; Encephalitozoon cuniculi|Rep: Similarity to 60S
ribosomal protein L35 - Encephalitozoon cuniculi
Length = 122
Score = 41.5 bits (93), Expect = 0.005
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Frame = -2
Query: 335 KVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYH 156
K++ S LR L LR K +G V + + I+ +K +AR V
Sbjct: 2 KIEASALRQLGIKQIEERAAEIKADLAALRQKKNSGDVGA--NDIKTAKKNLARALTVRR 59
Query: 155 QKMKVNLRNHYKNKKYK--PLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKS 6
+K+ L Y+ P +LR K R+ R+ALTK + + KTR++ + S
Sbjct: 60 EKILEELVEAYRGTPVSKLPKELRPKLNRSKRRALTKTQLRRKTRRQRARMS 111
>UniRef50_Q9UXG6 Cluster: Putative uncharacterized protein
ORF-c40_015; n=1; Sulfolobus solfataricus|Rep: Putative
uncharacterized protein ORF-c40_015 - Sulfolobus
solfataricus
Length = 360
Score = 37.9 bits (84), Expect = 0.065
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Frame = -2
Query: 233 TGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKA-- 60
T G+ S L K ++ IV+ QK+K +L +Y+NK + K+R+ RKA
Sbjct: 183 TVGLNSMLHKFELIYTIDPDYIIVFDQKIKDSLPENYRNKAILLKSVNLHKSRSERKANR 242
Query: 59 LTKHEAKIKTRKEIRKKS 6
+ K+E K K I+ S
Sbjct: 243 IAKYERYFKEAKNIKTLS 260
>UniRef50_UPI0000EBD742 Cluster: PREDICTED: similar to 60S ribosomal
protein L35; n=1; Bos taurus|Rep: PREDICTED: similar to
60S ribosomal protein L35 - Bos taurus
Length = 98
Score = 37.1 bits (82), Expect = 0.11
Identities = 25/58 (43%), Positives = 32/58 (55%)
Frame = -2
Query: 251 LRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKT 78
L + K+T V+SK SKI V K I+R+ V +Q K NLR KYKPL + T
Sbjct: 17 LGIIKMTSSVSSKPSKILGVCKFISRLLTVVNQTQKENLR------KYKPLQSKKAHT 68
>UniRef50_A0D1A4 Cluster: Chromosome undetermined scaffold_34, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_34,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 485
Score = 34.7 bits (76), Expect = 0.61
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -2
Query: 176 RVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKE 21
R Y++ +Q + + L N YKN+K +R+ K +K K KIK RK+
Sbjct: 280 RNYLIQNQIIILQLSNSYKNRKLSKKKIRSLKKSKKKKFKLKSILKIKKRKK 331
>UniRef50_A5BMW0 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 185
Score = 33.5 bits (73), Expect = 1.4
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = -2
Query: 215 KLSKIRVVRKAIARVYIVYHQKMKVNLRNHYK-NKKYKPLDLRAKKTRAMRKALTKHEAK 39
+L K + +K + Y+ QK ++ R K NK+ K L + +K + K K + +
Sbjct: 110 QLKKKKKKKKKQKKQYLEKKQKKQLKKRKKKKKNKQNKQLTKKLRKQKMKNKKXKKQKKQ 169
Query: 38 IKTRKEIRKK 9
K RK+++KK
Sbjct: 170 RKQRKQLKKK 179
>UniRef50_A6G958 Cluster: Putative uncharacterized protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Putative
uncharacterized protein - Plesiocystis pacifica SIR-1
Length = 288
Score = 33.1 bits (72), Expect = 1.9
Identities = 31/120 (25%), Positives = 47/120 (39%), Gaps = 1/120 (0%)
Frame = -2
Query: 362 EENVTVKMGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKA 183
++ VT K+ K K S+ K +T + AK VA K + +V +K
Sbjct: 128 KKKVTKKVAKKKASKKVAKKKAAKKVTKKKAAKKVTKKKAAKK---VAKKKAAKKVAKKK 184
Query: 182 IARVYIVYHQKMKVNLRNHYKNKKY-KPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKS 6
A+ KV + K K K KKT A +K TK + K + +KK+
Sbjct: 185 AAKKVTKKKAAKKVTKKKVAKKKTAAKKKTAAKKKTAAKKKTATKKKTATKKKTAAKKKT 244
>UniRef50_UPI0000499951 Cluster: hypothetical protein 264.t00009;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 264.t00009 - Entamoeba histolytica HM-1:IMSS
Length = 490
Score = 32.7 bits (71), Expect = 2.5
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = -2
Query: 191 RKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRK 12
RKA + ++ + K N+ +K K+Y+ + K+ + K L K +KI RK K
Sbjct: 146 RKAQLKRRMLKKRMSKRNIMKFFKRKQYQSKKISKKQVKKAAKILLKKYSKILARKNNHK 205
Query: 11 KS 6
K+
Sbjct: 206 KT 207
>UniRef50_Q4Z2R9 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 819
Score = 32.7 bits (71), Expect = 2.5
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = -2
Query: 254 NLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTR 75
N+RV + V SK +I ++ K + Y ++ K+ +N Y+N+K K + KT+
Sbjct: 559 NVRVYVLIKNVVSK-KQIDIMNKLEGEQKLRYKERKKIREQNLYRNEKIKDRNGNHLKTK 617
Query: 74 AMRKALTKHEAK 39
L HE K
Sbjct: 618 NEEYYLLPHEKK 629
>UniRef50_Q7Z7F7 Cluster: 39S ribosomal protein L55, mitochondrial
precursor; n=17; Eutheria|Rep: 39S ribosomal protein
L55, mitochondrial precursor - Homo sapiens (Human)
Length = 128
Score = 32.7 bits (71), Expect = 2.5
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = -2
Query: 221 ASKLSKIRVVRKAIARVY---IVYHQKMKVNLRNHYKNKKYK-PLDLRAKKTRAMRKALT 54
+S+ S RV R+A AR+Y +V +++R + P+DL R L
Sbjct: 35 SSRASLTRVHRQAYARLYPVLLVKQDGSTIHIRYREPRRMLAMPIDLDTLSPEERRARLR 94
Query: 53 KHEAKIKTRKEIRKK 9
K EA++++RKE ++
Sbjct: 95 KREAQLQSRKEYEQE 109
>UniRef50_UPI0000498AB1 Cluster: hypothetical protein 21.t00051;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 21.t00051 - Entamoeba histolytica HM-1:IMSS
Length = 822
Score = 32.3 bits (70), Expect = 3.3
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Frame = -2
Query: 239 KVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNH---YKNKKYKPLDLRAKKTRAM 69
KV V K+SK+ + K + + +KM NLR Y KK L+ + K
Sbjct: 517 KVLRKVQKKMSKVNKLSKKNTKKAQLKVKKMMKNLRKQSKKYAQKKSAKLNKKISKINRR 576
Query: 68 RKALTKHEAKIKTRKEIRKKSL 3
+K K K + K + KK L
Sbjct: 577 KKVSKKINNKRRVNKRLNKKRL 598
>UniRef50_UPI0000F1D785 Cluster: PREDICTED: similar to LOC553316
protein; n=2; Danio rerio|Rep: PREDICTED: similar to
LOC553316 protein - Danio rerio
Length = 284
Score = 31.1 bits (67), Expect = 7.5
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = -2
Query: 209 SKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKH-EAKIK 33
SK K +A+++ + +K+N HY + + KP+ R +K + + K EA+I
Sbjct: 170 SKAECDLKHVAKLFKSIDEMVKMNRGQHY-SSEIKPISQRQEKNERVTQGEPKRLEAQIN 228
Query: 32 TRKEIRKKS 6
K+I+ K+
Sbjct: 229 IDKDIKTKT 237
>UniRef50_Q8Y3Q8 Cluster: Lmo2775 protein; n=5; Listeria|Rep:
Lmo2775 protein - Listeria monocytogenes
Length = 722
Score = 31.1 bits (67), Expect = 7.5
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 132 SKIDLHLLVIHNVNTCDSFSYNTDLGQFRSNSTSNFSNP 248
SK DL + +I+ N D FSY+++ G FR T N ++P
Sbjct: 507 SKEDLRVNIIYAENNQDYFSYDSNTGDFR---TGNITDP 542
>UniRef50_Q4Y885 Cluster: Putative uncharacterized protein; n=7;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 1729
Score = 31.1 bits (67), Expect = 7.5
Identities = 15/49 (30%), Positives = 30/49 (61%)
Frame = -2
Query: 170 YIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRK 24
Y++ ++ +K+ +R K+ K L + KK + M+K K+ +K+KT+K
Sbjct: 288 YLMKNKILKMKIRRKEIEKEKKLLRDQKKKKKNMKKKNGKNSSKVKTKK 336
>UniRef50_A7SHI3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella vectensis
Length = 1108
Score = 31.1 bits (67), Expect = 7.5
Identities = 22/57 (38%), Positives = 31/57 (54%)
Frame = -2
Query: 221 ASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTK 51
ASK SK RV R IA++ H ++ +RN N K +R K+RAM+K T+
Sbjct: 987 ASKKSKKRVGRPDIAQLMRAKHFGIQTEVRN--LNSKCLIFGVRKFKSRAMKKMQTR 1041
>UniRef50_UPI0000F2ADF6 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 744
Score = 30.7 bits (66), Expect = 9.9
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -1
Query: 159 SPEDEGQS*KPLQKQEIQAFRFKSQEDP 76
SP+D+ QS KPL+ QEIQ +F + P
Sbjct: 480 SPKDDYQSSKPLESQEIQPQQFLKSKAP 507
>UniRef50_A5FGD8 Cluster: Phage integrase family protein; n=1;
Flavobacterium johnsoniae UW101|Rep: Phage integrase
family protein - Flavobacterium johnsoniae UW101
Length = 386
Score = 30.7 bits (66), Expect = 9.9
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
Frame = -2
Query: 161 YHQKMKVNLRNHYKNKKYKPLDLRA-----KKTRAMRKALTKHEAK 39
YH K+K L+N YK +K + D+ A K+ + R LT EAK
Sbjct: 178 YHNKLKTTLKNAYKEQKLR-TDINAGIDSIKEQESQRNFLTLKEAK 222
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 288,885,136
Number of Sequences: 1657284
Number of extensions: 4153487
Number of successful extensions: 13110
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 12599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13028
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 15293670012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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