Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11k18f
(609 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF493864-1|ABP65286.1| 247|Apis mellifera triosephoshpate isome... 273 1e-75
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 24 1.3
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 24 1.3
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 23 2.3
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 23 2.3
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 23 2.3
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 5.4
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 5.4
DQ435330-1|ABD92645.1| 132|Apis mellifera OBP13 protein. 21 9.4
AY545000-1|AAS50159.2| 126|Apis mellifera profilin protein. 21 9.4
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 21 9.4
>EF493864-1|ABP65286.1| 247|Apis mellifera triosephoshpate
isomerase protein.
Length = 247
Score = 273 bits (669), Expect = 1e-75
Identities = 125/170 (73%), Positives = 147/170 (86%)
Frame = +2
Query: 98 MGRKFVVGGNWKMNGDKNQINEIVNNLKKGPLDPNVEVIVGVPAIYLSYVKTIIPDNVEV 277
MGRKF VGGNWKMNG K++IN+IV LKKGPLD NVEV+VGVP+IYL+Y K I+P+N+ +
Sbjct: 1 MGRKFFVGGNWKMNGTKSEINDIVGFLKKGPLDSNVEVVVGVPSIYLTYAKNILPNNISI 60
Query: 278 AAQNCWKSPKGAFTGEISPAMIKDVGVNWVILGHSERRTIFGEKDELVAEKVAHALESGL 457
A QN +K KGAFTGEISPAM+ D G+ WVILGHSERR IFGE DEL+AEKVAHALESGL
Sbjct: 61 AGQNTYKVAKGAFTGEISPAMLLDNGIPWVILGHSERRNIFGENDELIAEKVAHALESGL 120
Query: 458 KVIACIGETLEERESGKTEEVVFRQLKALVSAIGDKWENIVLAYEPVWAI 607
KVIACIGE LEERE+GKT+EVVFRQ KA+ + I + W+N+V+AYEPVWAI
Sbjct: 121 KVIACIGEKLEEREAGKTDEVVFRQTKAIANKI-NSWDNVVVAYEPVWAI 169
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 23.8 bits (49), Expect = 1.3
Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +2
Query: 110 FVVGGNWKMNGDKNQINEIVNNLKKGP-LDPNVEVIVGVPAIYLSYVKTIIP 262
F+ G W + G + NEI N P +D VI+ +Y + I+P
Sbjct: 191 FITNGEWDLLGVPGKRNEIYYNCCPEPYIDITFVVIIRRRTLYY-FFNLIVP 241
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.8 bits (49), Expect = 1.3
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 491 LRESHQYRQ*LSSQIQGHEQPFQQQ 417
L+ H + Q S+ +Q H +P+QQQ
Sbjct: 144 LQNHHHHLQ--STAVQDHHRPYQQQ 166
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 23.0 bits (47), Expect = 2.3
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +2
Query: 506 KTEEVVFRQLKALVSAIGDKWENIVLAYEP 595
K EV+ + +K LV + W+++ Y+P
Sbjct: 82 KQREVIKKVIKFLVENKPELWDSLANKYDP 111
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 23.0 bits (47), Expect = 2.3
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +2
Query: 506 KTEEVVFRQLKALVSAIGDKWENIVLAYEP 595
K EV+ + +K LV + W+++ Y+P
Sbjct: 82 KQREVIKKVIKFLVENKPELWDSLANKYDP 111
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 23.0 bits (47), Expect = 2.3
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +2
Query: 506 KTEEVVFRQLKALVSAIGDKWENIVLAYEP 595
K EV+ + +K LV + W+++ Y+P
Sbjct: 82 KQREVIKKVIKFLVENKPELWDSLANKYDP 111
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.8 bits (44), Expect = 5.4
Identities = 6/26 (23%), Positives = 15/26 (57%)
Frame = +2
Query: 212 IVGVPAIYLSYVKTIIPDNVEVAAQN 289
++G P+ + Y +IP+ ++ +N
Sbjct: 848 VIGTPSTGMMYKPFLIPEQTSISHEN 873
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.8 bits (44), Expect = 5.4
Identities = 9/35 (25%), Positives = 19/35 (54%)
Frame = -2
Query: 521 QLPQSCQILSLRESHQYRQ*LSSQIQGHEQPFQQQ 417
++ + Q + ++ HQ +Q + + +QP QQQ
Sbjct: 410 KMTEQQQQMQAQQQHQQQQQQTQHVINAQQPQQQQ 444
>DQ435330-1|ABD92645.1| 132|Apis mellifera OBP13 protein.
Length = 132
Score = 21.0 bits (42), Expect = 9.4
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +2
Query: 143 DKNQINEIVNNLK 181
D Q+N +VNN K
Sbjct: 92 DSEQVNRLVNNCK 104
>AY545000-1|AAS50159.2| 126|Apis mellifera profilin protein.
Length = 126
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -1
Query: 534 NCLKTTSSVLPDSLSSRVSPIQA 466
+C+KTT +V+ + P QA
Sbjct: 88 HCMKTTQAVVVSLYEDPIQPQQA 110
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.0 bits (42), Expect = 9.4
Identities = 12/42 (28%), Positives = 17/42 (40%)
Frame = -1
Query: 576 IFSHLSPMADTKAFNCLKTTSSVLPDSLSSRVSPIQAMTFKP 451
IF H S +TTS L D + +V + F+P
Sbjct: 171 IFIHSSDTDGRALLGRFQTTSQNLEDDVEIKVQVESVIEFEP 212
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,895
Number of Sequences: 438
Number of extensions: 3894
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -