Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11k17f
(587 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 319 1e-87
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 319 1e-87
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 317 5e-87
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 316 9e-87
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 313 6e-86
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 308 2e-84
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 303 9e-83
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 265 2e-71
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 230 6e-61
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 168 3e-42
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 162 2e-40
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 155 3e-38
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 152 2e-37
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 146 2e-35
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 141 4e-34
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 138 4e-33
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 137 5e-33
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 1e-26
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 104 5e-23
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 102 2e-22
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 93 2e-19
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 85 3e-17
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 5e-16
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 56 2e-08
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 52 3e-07
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 50 2e-06
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 33 0.17
SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26) 29 2.1
SB_15838| Best HMM Match : Peptidase_A17 (HMM E-Value=7.9e-32) 29 2.8
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_45701| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_5299| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_34277| Best HMM Match : DUF321 (HMM E-Value=0.028) 28 4.9
SB_24904| Best HMM Match : Op_neuropeptide (HMM E-Value=1.4) 28 6.5
SB_21616| Best HMM Match : RVT_1 (HMM E-Value=0.00011) 28 6.5
SB_13469| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11) 27 8.6
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 319 bits (783), Expect = 1e-87
Identities = 145/161 (90%), Positives = 149/161 (92%)
Frame = +1
Query: 103 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 282
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 283 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 462
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQL+TGKEDAANNYARGHYT+GKEIVDLVLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLD 120
Query: 463 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 585
RIRKLADQCTGLQGFLIFH LLMERLSVDY
Sbjct: 121 RIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDY 161
Score = 317 bits (779), Expect = 4e-87
Identities = 145/160 (90%), Positives = 148/160 (92%)
Frame = +1
Query: 106 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 285
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 286 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 465
VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKEIVDLVLDR
Sbjct: 495 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDR 554
Query: 466 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 585
IRKLADQCTGLQGFLIFH LLMERLSVDY
Sbjct: 555 IRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDY 594
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 319 bits (783), Expect = 1e-87
Identities = 148/163 (90%), Positives = 149/163 (91%)
Frame = +1
Query: 97 IKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGA 276
I RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 63 ILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 122
Query: 277 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 456
GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV
Sbjct: 123 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 182
Query: 457 LDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 585
LDRIRKLADQCTGLQGFLIFH LLMERLSVDY
Sbjct: 183 LDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDY 225
Score = 316 bits (777), Expect = 7e-87
Identities = 143/161 (88%), Positives = 149/161 (92%)
Frame = +1
Query: 103 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 282
+RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 283 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 462
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++DLVLD
Sbjct: 646 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLD 705
Query: 463 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 585
RIRKLADQCTGLQGFLIFH LLMERLSVDY
Sbjct: 706 RIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDY 746
Score = 163 bits (397), Expect = 7e-41
Identities = 71/73 (97%), Positives = 73/73 (100%)
Frame = +1
Query: 106 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 285
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 286 VPRAVFVDLEPTV 324
VPRAVFVDLEPTV
Sbjct: 574 VPRAVFVDLEPTV 586
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 317 bits (778), Expect = 5e-87
Identities = 144/160 (90%), Positives = 148/160 (92%)
Frame = +1
Query: 106 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 285
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 286 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 465
VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKEI+DLVLDR
Sbjct: 61 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDR 120
Query: 466 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 585
IRKLADQCTGLQGFLIFH LLMERLSVDY
Sbjct: 121 IRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDY 160
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 316 bits (776), Expect = 9e-87
Identities = 144/161 (89%), Positives = 148/161 (91%)
Frame = +1
Query: 103 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 282
MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 283 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 462
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 463 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 585
R RKLADQCTGLQGFLIFH LLMERLSVDY
Sbjct: 121 RCRKLADQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDY 161
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 313 bits (769), Expect = 6e-86
Identities = 142/160 (88%), Positives = 147/160 (91%)
Frame = +1
Query: 106 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 285
RECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 286 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 465
VPRAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++DLVLDR
Sbjct: 866 VPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDR 925
Query: 466 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 585
IRKLADQCTGLQGFLIFH LLMERLSVDY
Sbjct: 926 IRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDY 965
Score = 307 bits (753), Expect = 5e-84
Identities = 137/160 (85%), Positives = 146/160 (91%)
Frame = +1
Query: 106 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 285
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDD+FNTFF+ETGAGKH
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 286 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 465
VPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE +D+VLDR
Sbjct: 433 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDR 492
Query: 466 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 585
+RKLAD CTGLQGFLIFH LLMERLSVDY
Sbjct: 493 LRKLADGCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDY 532
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 308 bits (756), Expect = 2e-84
Identities = 139/161 (86%), Positives = 146/161 (90%)
Frame = +1
Query: 103 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 282
MRECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG+GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 283 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 462
HVPRAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 61 HVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLD 120
Query: 463 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 585
R+RKLAD CTGLQGFLIFH LLMERLSVDY
Sbjct: 121 RLRKLADGCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDY 161
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 303 bits (743), Expect = 9e-83
Identities = 133/160 (83%), Positives = 146/160 (91%)
Frame = +1
Query: 106 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 285
REC+S+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 286 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 465
VPRAVFVDLEP+V+DE+RTGTYRQLFHPEQLITGKEDAANNYARGHYT+GK+ +D VLDR
Sbjct: 480 VPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDR 539
Query: 466 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 585
IRKLADQC+GLQGFL+FH LL+ERLSVDY
Sbjct: 540 IRKLADQCSGLQGFLVFHSFGGGTGSGFSALLLERLSVDY 579
Score = 279 bits (685), Expect = 9e-76
Identities = 124/146 (84%), Positives = 133/146 (91%)
Frame = +1
Query: 148 IGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVV 327
+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKHVPRAVF DLEPTVV
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVV 60
Query: 328 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGF 507
DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GK+++++VLDR+RKLADQCTGLQGF
Sbjct: 61 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQCTGLQGF 120
Query: 508 LIFHXXXXXXXXXXXXLLMERLSVDY 585
LIFH LLMERLSVDY
Sbjct: 121 LIFHSFGGGTGSGFSSLLMERLSVDY 146
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 265 bits (650), Expect = 2e-71
Identities = 127/161 (78%), Positives = 132/161 (81%)
Frame = +1
Query: 103 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 282
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKT GGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 283 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 462
HVPRAVFVDLEPTVV PEQLITGKEDAANNYARGHYTIGK+ VD VLD
Sbjct: 61 HVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHYTIGKQQVDQVLD 110
Query: 463 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 585
R+RKLADQC+GLQGF IFH LLMERLSVDY
Sbjct: 111 RLRKLADQCSGLQGFFIFHSFGGGTGSGFSSLLMERLSVDY 151
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 230 bits (563), Expect = 6e-61
Identities = 104/126 (82%), Positives = 112/126 (88%)
Frame = +1
Query: 208 MPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITG 387
MP+DKTIGGGDDSFNTFF+ETGAGKHVPRAVFVDLEPTV+DE+RTGTYRQLFHPEQL++G
Sbjct: 1 MPSDKTIGGGDDSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSG 60
Query: 388 KEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 567
KEDAANNYARGHYT+GKE +DL LDRIRKLADQCTGLQGFLIFH LLME
Sbjct: 61 KEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLME 120
Query: 568 RLSVDY 585
RLSVDY
Sbjct: 121 RLSVDY 126
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 168 bits (408), Expect = 3e-42
Identities = 75/108 (69%), Positives = 88/108 (81%)
Frame = +1
Query: 262 SETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKE 441
SE AGK+VPRAV VDLEPTV+DEVRTG YR L+HPEQ+I+GKEDAANNYARGHYTIGKE
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKE 1024
Query: 442 IVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 585
+V++V+D+IRK+ DQC+GLQGFLIFH L+ E LSVDY
Sbjct: 1025 MVEVVMDKIRKMTDQCSGLQGFLIFHSFGGGTGSGFASLITEHLSVDY 1072
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 162 bits (394), Expect = 2e-40
Identities = 71/79 (89%), Positives = 75/79 (94%)
Frame = +1
Query: 103 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 282
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTI GGDDSFNTFFSETG GK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 283 HVPRAVFVDLEPTVVDEVR 339
HVPRAVFVDLEP+VV ++
Sbjct: 61 HVPRAVFVDLEPSVVGRMK 79
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 155 bits (376), Expect = 3e-38
Identities = 71/88 (80%), Positives = 75/88 (85%)
Frame = +1
Query: 322 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQ 501
+ DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++DLVLDRIRKLADQCTGLQ
Sbjct: 11 LADEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQ 70
Query: 502 GFLIFHXXXXXXXXXXXXLLMERLSVDY 585
GFLIFH LLMERLSVDY
Sbjct: 71 GFLIFHSFGGGTGSGFSSLLMERLSVDY 98
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 152 bits (369), Expect = 2e-37
Identities = 70/85 (82%), Positives = 73/85 (85%)
Frame = +1
Query: 331 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 510
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++DLVLDRIRKLADQCTGLQGFL
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFL 61
Query: 511 IFHXXXXXXXXXXXXLLMERLSVDY 585
IFH LLMERLSVDY
Sbjct: 62 IFHSFGGGTGSGFSSLLMERLSVDY 86
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 146 bits (353), Expect = 2e-35
Identities = 66/85 (77%), Positives = 71/85 (83%)
Frame = +1
Query: 331 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 510
E+RTGTYRQLFHPEQL++GKEDAANNYARGHYT+GKE +DL LDRIRKLADQCTGLQGFL
Sbjct: 2 EIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFL 61
Query: 511 IFHXXXXXXXXXXXXLLMERLSVDY 585
IFH LLMERLSVDY
Sbjct: 62 IFHSFGGGTGSGFSSLLMERLSVDY 86
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 141 bits (341), Expect = 4e-34
Identities = 69/166 (41%), Positives = 94/166 (56%)
Frame = +1
Query: 88 KTQIKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 267
K KMRE + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 209 KLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNE 266
Query: 268 TGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIV 447
GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+V
Sbjct: 267 ATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELV 326
Query: 448 DLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 585
D VLD +RK A+ C LQGF + H LL+ ++ +Y
Sbjct: 327 DSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 372
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 138 bits (333), Expect = 4e-33
Identities = 66/161 (40%), Positives = 92/161 (57%)
Frame = +1
Query: 103 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 282
MRE + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 58
Query: 283 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 462
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 118
Query: 463 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 585
+RK A+ C LQGF + H LL+ ++ +Y
Sbjct: 119 VVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 159
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 137 bits (332), Expect = 5e-33
Identities = 64/161 (39%), Positives = 94/161 (58%)
Frame = +1
Query: 103 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 282
MRE +S+ GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 58
Query: 283 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 462
+VPR+V +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLD 118
Query: 463 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 585
+RK A+ C +QGF + H LL+ ++ +Y
Sbjct: 119 VVRKEAESCDCIQGFQLTHSLGGGTGSGMGTLLISKIREEY 159
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 116 bits (279), Expect = 1e-26
Identities = 48/61 (78%), Positives = 55/61 (90%)
Frame = +1
Query: 103 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 282
MREC+S+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D++ DDSF+TFFSET +GK
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSDQSADRCDDSFSTFFSETASGK 255
Query: 283 H 285
H
Sbjct: 256 H 256
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/38 (63%), Positives = 25/38 (65%)
Frame = +1
Query: 472 KLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 585
K ADQCTGLQGFL+FH LLMERLSVDY
Sbjct: 255 KHADQCTGLQGFLVFHSFGGGTGSGFSSLLMERLSVDY 292
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 104 bits (250), Expect = 5e-23
Identities = 46/49 (93%), Positives = 49/49 (100%)
Frame = +1
Query: 331 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKL 477
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++DLVLDRIRKL
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKL 50
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 102 bits (245), Expect = 2e-22
Identities = 46/103 (44%), Positives = 65/103 (63%)
Frame = +1
Query: 277 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 456
GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD V
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 61
Query: 457 LDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 585
LD +RK A+ C +QGF + H LL+ ++ +Y
Sbjct: 62 LDVVRKEAESCDCIQGFQLTHSLGGGTGSGMVTLLILKIREEY 104
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 92.7 bits (220), Expect = 2e-19
Identities = 40/49 (81%), Positives = 45/49 (91%)
Frame = +1
Query: 331 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKL 477
EVR GTYR LFHP+QLITGKEDAANNYARGHYT+GKE +DL L++IRKL
Sbjct: 2 EVRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRKL 50
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 85.4 bits (202), Expect = 3e-17
Identities = 35/103 (33%), Positives = 59/103 (57%)
Frame = +1
Query: 277 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 456
G++VPR++ VDLEP +D VR G +F P+ + + AANN+A+GHY+ G E++D +
Sbjct: 13 GRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNI 72
Query: 457 LDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 585
D +RK A+ C +QG + L++ ++ +Y
Sbjct: 73 FDVLRKEAENCDCMQGVQLIQALGGGTGSGLGTLILSKIREEY 115
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 81.4 bits (192), Expect = 5e-16
Identities = 38/93 (40%), Positives = 53/93 (56%)
Frame = +1
Query: 103 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 282
MRE + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 58
Query: 283 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 381
+VPRA+ VDLEP +D VR+G + Q+F P+ +
Sbjct: 59 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFV 91
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/66 (39%), Positives = 38/66 (57%)
Frame = +1
Query: 388 KEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 567
+ AANN+A+G YT G E++D +D IRKLA+ C +QGF I H LL+
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAHSLGGGTGSGLGSLLLS 61
Query: 568 RLSVDY 585
++ +Y
Sbjct: 62 KIREEY 67
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 52.0 bits (119), Expect = 3e-07
Identities = 24/36 (66%), Positives = 24/36 (66%)
Frame = +1
Query: 478 ADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 585
ADQCTGLQGFLIFH LLMERLSVDY
Sbjct: 1 ADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDY 36
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 49.6 bits (113), Expect = 2e-06
Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 10/142 (7%)
Frame = +1
Query: 115 ISVHVGQAGVQIGNACWELYCLEHGIQPDG-----QMPTDKTIGGGDDSFNTFFSETGAG 279
+++ +GQ G QIG ++L +E + + ++ T ++S FF+
Sbjct: 4 VTLQLGQCGNQIGRELFDLI-VEDATKLNSRFLCKELTTRSCTEYEEESLARFFTRENDD 62
Query: 280 KHVPRAVFVDLEPTVVDEV-----RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 444
RAV +D+E V+ + ++GT+R + Q + K + NN+A G G +
Sbjct: 63 ILNARAVSIDMESKVISQTLSEASKSGTWR--YPKGQQFSQKRGSGNNWAHGFSEHGPKS 120
Query: 445 VDLVLDRIRKLADQCTGLQGFL 510
+D VLD +++ ++C L GFL
Sbjct: 121 IDKVLDLVQREVEKCDRLDGFL 142
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 292 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNY 411
RAV +D+E VV+ + G +F +QLIT NN+
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26)
Length = 904
Score = 29.5 bits (63), Expect = 2.1
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +1
Query: 106 RECISVHVGQAGVQIGNACWELYCLEHGIQPDG-QMPTDKT-IGGGDDSFNTFFSETGAG 279
+ C S + +GV+ G W L + GIQP P+D + D +NT +
Sbjct: 237 KPCASKKILASGVRYGKLTWTLGAMTSGIQPSTVSAPSDDSDCNVLCDQYNTVLNHF-IE 295
Query: 280 KHVP-RAVFVDLEP 318
KH P R V L P
Sbjct: 296 KHAPVRTFSVTLRP 309
>SB_15838| Best HMM Match : Peptidase_A17 (HMM E-Value=7.9e-32)
Length = 1027
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1
Query: 289 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGK 438
P V+ L T VD+V+TG PEQL+ K++A+ RG + + K
Sbjct: 126 PETVYQLLTNTYVDDVQTGG----DDPEQLLRFKQEASEIMERGGFQLHK 171
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +1
Query: 163 WELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 267
WE+ EHGI PDGQ T D N +F E
Sbjct: 2 WEVIAEEHGIDPDGQC-TAVQSKIQTDRLNVYFDE 35
>SB_45701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 326
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -2
Query: 238 LHPRWSCLWASGHQAGCRAPGSKAPSRHYRSGLRLGQ 128
LH ++S L+ G +G ++PG AP RH R+ RL Q
Sbjct: 32 LHFQYSGLYG-GVDSGKQSPGVMAPPRHSRNRNRLSQ 67
>SB_5299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +1
Query: 184 HGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAV 300
+GI+PDGQ D+ +NT F G P A+
Sbjct: 708 NGIRPDGQGLVDEGFKTASGIYNTCFERLGMNFQTPEAI 746
>SB_34277| Best HMM Match : DUF321 (HMM E-Value=0.028)
Length = 302
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +3
Query: 333 GPHWHIQTVVSSRTTYYW*GRCGQQLCPWSLHHWKGN 443
G HW+ T + +W G G + W HW GN
Sbjct: 48 GKHWYGNTGTKTLIWKHWYGNTGTKTLIWK--HWYGN 82
>SB_24904| Best HMM Match : Op_neuropeptide (HMM E-Value=1.4)
Length = 507
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +3
Query: 417 WSLHHWKG---NRRFGFGQNPQAR*PVYRSARIPDLPLLRWRYRL 542
W+L HW +F G + + P++ S I +LP+ R+R+
Sbjct: 142 WALEHWSDLLVGMKFTIGTDHKPLVPLFTSKMIDELPVRIQRFRM 186
>SB_21616| Best HMM Match : RVT_1 (HMM E-Value=0.00011)
Length = 1380
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +3
Query: 417 WSLHHWKG---NRRFGFGQNPQAR*PVYRSARIPDLPLLRWRYRL 542
W+L HW +F G + + P++ S I +LP+ R+R+
Sbjct: 763 WALEHWSDLLVGMKFTIGTDHKPLVPLFTSKMIDELPVRIQRFRM 807
>SB_13469| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2429
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -3
Query: 345 ASADLINNSRFKID-EDSTGYVLASSGLAEESVERIVSTP 229
ASAD + + ID +D++G L SGL EE +E IV P
Sbjct: 1043 ASADKVKSPVLSIDLKDTSGQKLEISGLKEE-IELIVEGP 1081
>SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11)
Length = 1903
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -2
Query: 538 RYLHRRSGRSGILADRYTGQRACGFCPKPNLRFPF 434
RY H + +T +R C F P N+ FPF
Sbjct: 426 RYGHEHDTNTSRYEHEHTTKRMCSFRPGSNVVFPF 460
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,508,732
Number of Sequences: 59808
Number of extensions: 431223
Number of successful extensions: 1113
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1422302661
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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