Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11k15r
(739 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 130 1e-30
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 130 1e-30
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 127 1e-29
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 93 2e-19
03_01_0548 + 4099386-4099847,4100435-4101316 84 1e-16
03_01_0547 + 4093196-4093657,4094267-4095148 84 1e-16
03_01_0544 + 4082528-4082989,4083585-4084466 84 1e-16
03_01_0543 + 4076981-4077442,4078145-4079026 84 1e-16
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 73 2e-13
02_04_0462 + 23131433-23132836 59 4e-09
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 42 7e-04
01_01_1208 + 9733010-9733114,9733920-9733979,9735254-9736280,973... 32 0.55
04_04_0342 - 24522035-24522869,24523001-24523137,24523243-245236... 29 5.1
09_06_0364 + 22554082-22554225,22554306-22554520,22554671-225547... 28 8.9
07_03_1721 - 29023979-29025295 28 8.9
>04_04_1015 - 30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 130 bits (314), Expect = 1e-30
Identities = 70/190 (36%), Positives = 111/190 (58%), Gaps = 1/190 (0%)
Frame = -2
Query: 738 INDVFKGTGSG-FCVSGRIENGVLKKGDKVLVCPTKEMAEVRSLSINDLTNNVAFAGDQV 562
I DV K +G F G++E G ++ G KVL+ P E+A V+S+ + + ++A AGD V
Sbjct: 484 ICDVIKSQSTGQFAAFGKLETGAIRIGSKVLISPCGEVAAVKSIERDSNSCDIARAGDNV 543
Query: 561 TLTLSGVDMQNVSVGYILSDPIEQVSVTTRFEARIVVFNVKVPITKGFPVLVHYQSLVES 382
++L G+D + +G IL +P V V+ E R++V +V +PI G+ V H + E+
Sbjct: 544 AVSLQGIDGSKLILGGILCNPGFPVPVSNFLELRVLVLDVTIPILIGYQVEFHIHHVKEA 603
Query: 381 ANIVKLKALLSKSTGELIKKKPRCLGNNSVAVVEIETSRPICIERYKDVKELGRVMLRVA 202
A + K+ ALL K+ G+ K PR L + AVV++ P+C++ + + LGR LR +
Sbjct: 604 ARVTKIVALLDKA-GKPSKTAPRFLKSKQNAVVQVTLDAPVCVQEFSKCRALGRAFLRSS 662
Query: 201 GVTIAAGLVT 172
G TIA G+VT
Sbjct: 663 GSTIAVGVVT 672
>04_04_1008 - 30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 130 bits (314), Expect = 1e-30
Identities = 70/190 (36%), Positives = 111/190 (58%), Gaps = 1/190 (0%)
Frame = -2
Query: 738 INDVFKGTGSG-FCVSGRIENGVLKKGDKVLVCPTKEMAEVRSLSINDLTNNVAFAGDQV 562
I DV K +G F G++E G ++ G KVL+ P E+A V+S+ + + ++A AGD V
Sbjct: 484 ICDVIKSQSTGQFAAFGKLETGAIRIGSKVLISPCGEVAAVKSIERDSNSCDIARAGDNV 543
Query: 561 TLTLSGVDMQNVSVGYILSDPIEQVSVTTRFEARIVVFNVKVPITKGFPVLVHYQSLVES 382
++L G+D + +G IL +P V V+ E R++V +V +PI G+ V H + E+
Sbjct: 544 AVSLQGIDGSKLILGGILCNPGFPVPVSNFLELRVLVLDVTIPILIGYQVEFHIHHVKEA 603
Query: 381 ANIVKLKALLSKSTGELIKKKPRCLGNNSVAVVEIETSRPICIERYKDVKELGRVMLRVA 202
A + K+ ALL K+ G+ K PR L + AVV++ P+C++ + + LGR LR +
Sbjct: 604 ARVTKIVALLDKA-GKPSKTAPRFLKSKQNAVVQVTLDAPVCVQEFSKCRALGRAFLRSS 662
Query: 201 GVTIAAGLVT 172
G TIA G+VT
Sbjct: 663 GSTIAVGVVT 672
>04_04_1593 - 34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 127 bits (306), Expect = 1e-29
Identities = 70/192 (36%), Positives = 111/192 (57%), Gaps = 1/192 (0%)
Frame = -2
Query: 738 INDVFKGTGSG-FCVSGRIENGVLKKGDKVLVCPTKEMAEVRSLSINDLTNNVAFAGDQV 562
I DVF G + G++E G + G K+LV P E+A V+++ N + N+A AGD V
Sbjct: 468 ICDVFSSHKLGQVAIGGKVEVGATRSGSKILVMPFGELAVVKTIERNSSSCNLARAGDNV 527
Query: 561 TLTLSGVDMQNVSVGYILSDPIEQVSVTTRFEARIVVFNVKVPITKGFPVLVHYQSLVES 382
+ L G+D ++ G ++ P VSV + E +I+V ++ VPI G V S
Sbjct: 528 AIGLQGIDPSHIMPGGVICHPDYPVSVASCLELKILVLDITVPILVGLQV---------S 578
Query: 381 ANIVKLKALLSKSTGELIKKKPRCLGNNSVAVVEIETSRPICIERYKDVKELGRVMLRVA 202
A++VK+ +LL + TG+ KK PR L + AV+E++ + +C+E + ++K LGRV LR
Sbjct: 579 ASMVKILSLLEQKTGKASKKIPRFLTSRQTAVIEVKLEKEVCVEEFSNLKALGRVFLRSQ 638
Query: 201 GVTIAAGLVTDI 166
G TIA G+V+ +
Sbjct: 639 GNTIAVGIVSRV 650
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 93.1 bits (221), Expect = 2e-19
Identities = 58/189 (30%), Positives = 97/189 (51%), Gaps = 9/189 (4%)
Frame = -2
Query: 738 INDVFKGTGSGFCVSGRIENGVLKKGDKVLVCPTKEMAEVRSLSINDLTNNVAFAGDQVT 559
I D +K G+ V G+IE+G +++GD +LV P K +V +S+++ A + V
Sbjct: 232 IIDKYKDMGT--VVMGKIESGTIREGDSLLVMPNKTNVKVIGISLDEHKVRRAGPAENVR 289
Query: 558 LTLSGVDMQNVSVGYILSDPIEQVSVTTRFEARIVVFNV--KVPITKGFPVLVHYQSLVE 385
+ LSG++ +++ G++LS V T F A++ + + T G+ ++H S+VE
Sbjct: 290 VKLSGIEDEDIMAGFVLSSIGNPVGAVTEFNAQLQILELLDNAIFTAGYKAVLHIHSVVE 349
Query: 384 SANIVKLKA---LLSKSTGELIKKKPR----CLGNNSVAVVEIETSRPICIERYKDVKEL 226
IV L + K + KKKP+ + N +V V I+ + ICIE + D +L
Sbjct: 350 ECEIVDLIEEIDMKKKKEADPKKKKPKRKPLFVKNGAVVVCRIQVNNLICIENFSDFPQL 409
Query: 225 GRVMLRVAG 199
GR LR G
Sbjct: 410 GRFTLRTEG 418
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 84.2 bits (199), Expect = 1e-16
Identities = 50/193 (25%), Positives = 99/193 (51%), Gaps = 2/193 (1%)
Frame = -2
Query: 738 INDVFKGTGSGFCVSGRIENGVLKKGDKVLVCPTKEMAEVRSLSINDLTNNVAFAGDQVT 559
+ DV+K G G GR+E GVLK G V P+ EV+S+ ++ A GD V
Sbjct: 238 LQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVG 297
Query: 558 LTLSGVDMQNVSVGYILSDPIEQ-VSVTTRFEARIVVFNVKVPITKGF-PVLVHYQSLVE 385
+ V ++++ GY+ S+ + F +++++ N I G+ PVL + S +
Sbjct: 298 FNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHI- 356
Query: 384 SANIVKLKALLSKSTGELIKKKPRCLGNNSVAVVEIETSRPICIERYKDVKELGRVMLRV 205
+ +L + + +G+ ++K+P+ L N +V++ ++P+ +E + + LGR +R
Sbjct: 357 AVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRD 416
Query: 204 AGVTIAAGLVTDI 166
T+A G++ ++
Sbjct: 417 MRQTVAVGVIKNV 429
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 84.2 bits (199), Expect = 1e-16
Identities = 50/193 (25%), Positives = 99/193 (51%), Gaps = 2/193 (1%)
Frame = -2
Query: 738 INDVFKGTGSGFCVSGRIENGVLKKGDKVLVCPTKEMAEVRSLSINDLTNNVAFAGDQVT 559
+ DV+K G G GR+E GVLK G V P+ EV+S+ ++ A GD V
Sbjct: 238 LQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVG 297
Query: 558 LTLSGVDMQNVSVGYILSDPIEQ-VSVTTRFEARIVVFNVKVPITKGF-PVLVHYQSLVE 385
+ V ++++ GY+ S+ + F +++++ N I G+ PVL + S +
Sbjct: 298 FNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHI- 356
Query: 384 SANIVKLKALLSKSTGELIKKKPRCLGNNSVAVVEIETSRPICIERYKDVKELGRVMLRV 205
+ +L + + +G+ ++K+P+ L N +V++ ++P+ +E + + LGR +R
Sbjct: 357 AVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRD 416
Query: 204 AGVTIAAGLVTDI 166
T+A G++ ++
Sbjct: 417 MRQTVAVGVIKNV 429
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 84.2 bits (199), Expect = 1e-16
Identities = 50/193 (25%), Positives = 99/193 (51%), Gaps = 2/193 (1%)
Frame = -2
Query: 738 INDVFKGTGSGFCVSGRIENGVLKKGDKVLVCPTKEMAEVRSLSINDLTNNVAFAGDQVT 559
+ DV+K G G GR+E GVLK G V P+ EV+S+ ++ A GD V
Sbjct: 238 LQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVG 297
Query: 558 LTLSGVDMQNVSVGYILSDPIEQ-VSVTTRFEARIVVFNVKVPITKGF-PVLVHYQSLVE 385
+ V ++++ GY+ S+ + F +++++ N I G+ PVL + S +
Sbjct: 298 FNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHI- 356
Query: 384 SANIVKLKALLSKSTGELIKKKPRCLGNNSVAVVEIETSRPICIERYKDVKELGRVMLRV 205
+ +L + + +G+ ++K+P+ L N +V++ ++P+ +E + + LGR +R
Sbjct: 357 AVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRD 416
Query: 204 AGVTIAAGLVTDI 166
T+A G++ ++
Sbjct: 417 MRQTVAVGVIKNV 429
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 84.2 bits (199), Expect = 1e-16
Identities = 50/193 (25%), Positives = 99/193 (51%), Gaps = 2/193 (1%)
Frame = -2
Query: 738 INDVFKGTGSGFCVSGRIENGVLKKGDKVLVCPTKEMAEVRSLSINDLTNNVAFAGDQVT 559
+ DV+K G G GR+E GVLK G V P+ EV+S+ ++ A GD V
Sbjct: 238 LQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVG 297
Query: 558 LTLSGVDMQNVSVGYILSDPIEQ-VSVTTRFEARIVVFNVKVPITKGF-PVLVHYQSLVE 385
+ V ++++ GY+ S+ + F +++++ N I G+ PVL + S +
Sbjct: 298 FNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHI- 356
Query: 384 SANIVKLKALLSKSTGELIKKKPRCLGNNSVAVVEIETSRPICIERYKDVKELGRVMLRV 205
+ +L + + +G+ ++K+P+ L N +V++ ++P+ +E + + LGR +R
Sbjct: 357 AVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRD 416
Query: 204 AGVTIAAGLVTDI 166
T+A G++ ++
Sbjct: 417 MRQTVAVGVIKNV 429
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 73.3 bits (172), Expect = 2e-13
Identities = 48/164 (29%), Positives = 85/164 (51%), Gaps = 9/164 (5%)
Frame = -2
Query: 738 INDVFKGTGSGFCVSGRIENGVLKKGDKVLVCPTKEMAEVRSLSINDLTNNVAFAGDQVT 559
I D +K G+ V G+IE+G + +GD +LV P K +V S+ ++ A G+ V
Sbjct: 187 IIDKYKDMGT--VVMGKIESGTISEGDNMLVMPNKANVKVISVHCDEDRVRSAAPGENVR 244
Query: 558 LTLSGVDMQNVSVGYILSDPIEQVSVTTRFEARIVVFNV--KVPITKGFPVLVHYQSLVE 385
+ LSG++ +++ G++LS VS + F A++ + + T G+ ++H S+VE
Sbjct: 245 VKLSGIEEDDITAGFVLSSIKNPVSAISEFRAQLQILELLDNAIFTAGYKAVLHIHSVVE 304
Query: 384 SANIVKLKA---LLSKSTGELIKK----KPRCLGNNSVAVVEIE 274
IV+L L + G++ KK KP + N +V V ++
Sbjct: 305 ECEIVELIEEIDLKRRKEGDIKKKKSKRKPLFVKNGAVVVCRVQ 348
>02_04_0462 + 23131433-23132836
Length = 467
Score = 58.8 bits (136), Expect = 4e-09
Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 2/194 (1%)
Frame = -2
Query: 738 INDVFKGTGSGFCVSGRIENGVLKKGDKVLVCPTKEM--AEVRSLSINDLTNNVAFAGDQ 565
+ DVF TG G +GRIE G +K GD V + +E V + + T + A AGD
Sbjct: 283 VEDVFSITGRGTVATGRIERGTVKVGDTVDIVGIRETRNCTVTGVEMFQKTMDDAMAGDN 342
Query: 564 VTLTLSGVDMQNVSVGYILSDPIEQVSVTTRFEARIVVFNVKVPITKGFPVLVHYQSLVE 385
V L L G+ ++ G +L+ P ++ T+F+A + V K + P Y+
Sbjct: 343 VGLLLRGMQKDDIERGMVLAKP-ASITPHTKFDAVVYVLK-KDEGGRHSPFFPGYRPQF- 399
Query: 384 SANIVKLKALLSKSTGELIKKKPRCLGNNSVAVVEIETSRPICIERYKDVKELGRVMLRV 205
+ ++K + ++ C+ + V +V +E +P+ E+ R +R
Sbjct: 400 YMRTTDVTGNVTKIMNDKDEEAKMCMPGDRVKMV-VELIQPVACEQGM------RFAIRE 452
Query: 204 AGVTIAAGLVTDII 163
G T+ AG++ I+
Sbjct: 453 GGKTVGAGVINTIL 466
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 41.5 bits (93), Expect = 7e-04
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Frame = -2
Query: 738 INDVFKGTGSGFCVSGRIENGVLKKGDKVLV---CPTKEM-AEVRSLSINDLTNNVAFAG 571
I DVF G G V+GR+E G +K G+ V + P+ + V + + + AG
Sbjct: 272 IEDVFSIQGRGTVVTGRVEQGTIKTGEDVEILGLTPSGPLKTTVTGVEMFKKILDHGEAG 331
Query: 570 DQVTLTLSGVDMQNVSVGYILSDPIEQVSVTTRFEARIVV 451
D V L L G+ +V G ++ P V +FEA I V
Sbjct: 332 DNVGLLLRGLKRGDVQRGQVVCKP-GTVKTYQKFEAEIYV 370
>01_01_1208 +
9733010-9733114,9733920-9733979,9735254-9736280,
9736332-9736621
Length = 493
Score = 31.9 bits (69), Expect = 0.55
Identities = 30/136 (22%), Positives = 56/136 (41%), Gaps = 2/136 (1%)
Frame = -2
Query: 693 GRIENGVLKKGDKVLVCPTKEMAEVRSLSINDLTNNVA--FAGDQVTLTLSGVDMQNVSV 520
G + +LKK DK+L CP E + N+ + F + +G M+NV V
Sbjct: 120 GSVPEKILKKPDKILPCPRCNSMETKFCYFNNYNVHQPRHFCRNCQRYWTAGGAMRNVPV 179
Query: 519 GYILSDPIEQVSVTTRFEARIVVFNVKVPITKGFPVLVHYQSLVESANIVKLKALLSKST 340
G + V+ +A + N P +VH+Q + ++++ +++
Sbjct: 180 G---AGRRRNKHVSKYCQAMMTCNNTVAP--GDVSDVVHHQVITHGSSLLPATLKENETP 234
Query: 339 GELIKKKPRCLGNNSV 292
E I + P C + S+
Sbjct: 235 TEFISEVPPCKSSASI 250
>04_04_0342 -
24522035-24522869,24523001-24523137,24523243-24523683,
24523879-24524096,24524263-24524350
Length = 572
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = +2
Query: 194 VTPATRNITRPSSL---TSLYLSMHMGLLVSISTTATELFPKQRGFFLI 331
+T T + P+ L T LY +MHMG + S STT T + GF L+
Sbjct: 31 LTVVTSTVNVPNMLNMVTYLYGTMHMG-ISSSSTTVTNVLGATSGFALL 78
>09_06_0364 +
22554082-22554225,22554306-22554520,22554671-22554752,
22554976-22555371,22555553-22556293,22556420-22556551,
22556981-22557367
Length = 698
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 506 LSMYPTDTFCMSTPDKVNVTWSPAN 580
+S +PTD C S VN +W AN
Sbjct: 479 ISAWPTDAGCTSQAGSVNESWDNAN 503
>07_03_1721 - 29023979-29025295
Length = 438
Score = 27.9 bits (59), Expect = 8.9
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = -2
Query: 693 GRIENGVLKKGDKVLVCPTKEMAEVRSLSINDLTNNVA--FAGDQVTLTLSGVDMQNVSV 520
G E VLKK DK+L CP + + N+ N F +G M+N+ V
Sbjct: 56 GSSEEKVLKKPDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKSCQRYWTAGGSMRNLPV 115
Query: 519 G 517
G
Sbjct: 116 G 116
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,279,356
Number of Sequences: 37544
Number of extensions: 316215
Number of successful extensions: 818
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 809
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -