Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11k15f
         (623 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003766-1|AAO41445.1|  670|Drosophila melanogaster RE29053p pro...   102   5e-22
AE014296-376|AAF47584.2|  670|Drosophila melanogaster CG1898-PA ...   102   5e-22
BT022140-1|AAY51535.1|  660|Drosophila melanogaster IP01538p pro...    33   0.41 
AE014134-917|AAF52249.1|  660|Drosophila melanogaster CG6604-PA ...    33   0.41 
BT021940-1|AAX51645.1|  627|Drosophila melanogaster RE27723p pro...    31   1.3  
AE014296-1335|AAF50512.2|  628|Drosophila melanogaster CG32365-P...    31   1.3  
AE014297-2526|AAF55560.3|  642|Drosophila melanogaster CG31122-P...    25   7.8  

>BT003766-1|AAO41445.1|  670|Drosophila melanogaster RE29053p
           protein.
          Length = 670

 Score =  102 bits (244), Expect = 5e-22
 Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 5/175 (2%)
 Frame = +1

Query: 112 MARHRNIRNRXXXXXXXXXX-FYGHSVEEDSCLSPSDASQWIYDRSRNQQVISNLLDRHS 288
           M+RHR +R              YGHSVE++ C+SP+DA QW+YDR+R QQ IS  + ++ 
Sbjct: 1   MSRHRIVRTMDYNDEYDGYDDIYGHSVEDEHCISPTDAQQWLYDRARGQQSISAFISKNK 60

Query: 289 NIXXXXXXXXXXXXXP-GPQRRESTDLCSLKLDAEGETRLMSCLDELRNILGDTVSENTM 465
           +I                  RR+S      +LD   + +L SC+DE+R+++GD VSE  +
Sbjct: 61  DIQEEEADEDEDEDAAFAKARRDSESFQMPQLDEIEQAKLSSCVDEVRSVVGDAVSERRI 120

Query: 466 IQSVLKHNFDYNKALDDIL---XXXXXXXXXXXXXXPVKPVITNTVKTTTALVAP 621
           +++ +K ++D  K LD+IL                 P  PV+  TV  T     P
Sbjct: 121 VETSMKFDYDMQKILDEILNEETNKSAKPAVNKMKAPAAPVLPKTVSKTVPTPPP 175


>AE014296-376|AAF47584.2|  670|Drosophila melanogaster CG1898-PA
           protein.
          Length = 670

 Score =  102 bits (244), Expect = 5e-22
 Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 5/175 (2%)
 Frame = +1

Query: 112 MARHRNIRNRXXXXXXXXXX-FYGHSVEEDSCLSPSDASQWIYDRSRNQQVISNLLDRHS 288
           M+RHR +R              YGHSVE++ C+SP+DA QW+YDR+R QQ IS  + ++ 
Sbjct: 1   MSRHRIVRTMDYNDEYDGYDDIYGHSVEDEHCISPTDAQQWLYDRARGQQSISAFISKNK 60

Query: 289 NIXXXXXXXXXXXXXP-GPQRRESTDLCSLKLDAEGETRLMSCLDELRNILGDTVSENTM 465
           +I                  RR+S      +LD   + +L SC+DE+R+++GD VSE  +
Sbjct: 61  DIQEEEADEDEDEDAAFAKARRDSESFQMPQLDEIEQAKLSSCVDEVRSVVGDAVSERRI 120

Query: 466 IQSVLKHNFDYNKALDDIL---XXXXXXXXXXXXXXPVKPVITNTVKTTTALVAP 621
           +++ +K ++D  K LD+IL                 P  PV+  TV  T     P
Sbjct: 121 VETSMKFDYDMQKILDEILNEETNKSAKPAVNKMKAPAAPVLPKTVSKTVPTPPP 175


>BT022140-1|AAY51535.1|  660|Drosophila melanogaster IP01538p
           protein.
          Length = 660

 Score = 32.7 bits (71), Expect = 0.41
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -2

Query: 220 HHLEINNYPLPLNVHKNHRHHSHQSNFCSE 131
           HH + +++  PLN H NH H+ H  +F ++
Sbjct: 51  HHHQNHHHHHPLNNHHNHNHNQHNISFATD 80


>AE014134-917|AAF52249.1|  660|Drosophila melanogaster CG6604-PA
           protein.
          Length = 660

 Score = 32.7 bits (71), Expect = 0.41
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -2

Query: 220 HHLEINNYPLPLNVHKNHRHHSHQSNFCSE 131
           HH + +++  PLN H NH H+ H  +F ++
Sbjct: 51  HHHQNHHHHHPLNNHHNHNHNQHNISFATD 80


>BT021940-1|AAX51645.1|  627|Drosophila melanogaster RE27723p
           protein.
          Length = 627

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
 Frame = -2

Query: 223 THHLEINNYPLP--LNVHKNHRHHSHQ 149
           +HH++ + Y LP  +  H++H HH HQ
Sbjct: 162 SHHIQSHIYDLPQQMQPHQHHHHHHHQ 188


>AE014296-1335|AAF50512.2|  628|Drosophila melanogaster CG32365-PA
           protein.
          Length = 628

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
 Frame = -2

Query: 223 THHLEINNYPLP--LNVHKNHRHHSHQ 149
           +HH++ + Y LP  +  H++H HH HQ
Sbjct: 163 SHHIQSHIYDLPQQMQPHQHHHHHHHQ 189


>AE014297-2526|AAF55560.3|  642|Drosophila melanogaster CG31122-PA
           protein.
          Length = 642

 Score = 24.6 bits (51), Expect(2) = 7.8
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 226 ATHHLEINNYPLPLNVHKNHRHHSH 152
           A HH    ++P   + H +H+HHSH
Sbjct: 595 ARHH----HHPATSHRHHHHQHHSH 615



 Score = 22.2 bits (45), Expect(2) = 7.8
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -2

Query: 178 HKNHRHHSHQ 149
           H +H HH HQ
Sbjct: 617 HSHHHHHHHQ 626


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,837,194
Number of Sequences: 53049
Number of extensions: 433577
Number of successful extensions: 2100
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2049
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2579793750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)