Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11k12f
         (617 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC054003-1|AAH54003.1| 1192|Homo sapiens RNASEN protein protein.       33   0.81 
AF189011-1|AAF80558.1| 1374|Homo sapiens ribonuclease III protein.     33   0.81 
U29895-1|AAC73008.1|  393|Homo sapiens 4-hydroxyphenylpyruvate-d...    30   5.7  
BC017188-1|AAH17188.1|  837|Homo sapiens TEL2, telomere maintena...    30   7.5  
AL031705-4|CAC37283.1|  837|Homo sapiens protein ( Human DNA seq...    30   7.5  
AE006467-10|AAK61284.1|  837|Homo sapiens KIAA0683 protein.            30   7.5  
AB014583-1|BAA31658.3|  844|Homo sapiens KIAA0683 protein protein.     30   7.5  

>BC054003-1|AAH54003.1| 1192|Homo sapiens RNASEN protein protein.
          Length = 1192

 Score = 33.1 bits (72), Expect = 0.81
 Identities = 14/52 (26%), Positives = 23/52 (44%)
 Frame = +3

Query: 342 QYEYSAPDGTPVKFTYTADENGYQPQSELLPVAPPMPEAIRRAIDYILAHPP 497
           QY+Y  P      F+ +   N   P+ + +P  PPMP + +  +      PP
Sbjct: 50  QYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPP 101


>AF189011-1|AAF80558.1| 1374|Homo sapiens ribonuclease III protein.
          Length = 1374

 Score = 33.1 bits (72), Expect = 0.81
 Identities = 14/52 (26%), Positives = 23/52 (44%)
 Frame = +3

Query: 342 QYEYSAPDGTPVKFTYTADENGYQPQSELLPVAPPMPEAIRRAIDYILAHPP 497
           QY+Y  P      F+ +   N   P+ + +P  PPMP + +  +      PP
Sbjct: 50  QYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPP 101


>U29895-1|AAC73008.1|  393|Homo sapiens
           4-hydroxyphenylpyruvate-dioxygenase protein.
          Length = 393

 Score = 30.3 bits (65), Expect = 5.7
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +3

Query: 405 GYQPQSELLPVAPPMPEAIRRAIDYILAHPPKTETV 512
           GY+P + + P+ P +P+     ID+I+ + P  E V
Sbjct: 159 GYEPPAFMDPLLPKLPKCSLEMIDHIVGNQPDQEMV 194


>BC017188-1|AAH17188.1|  837|Homo sapiens TEL2, telomere maintenance
           2, homolog (S. cerevisiae) protein.
          Length = 837

 Score = 29.9 bits (64), Expect = 7.5
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = +3

Query: 273 GISAQSSGSLKKVDNIDVLAIQGQYEYSAPDGTPVKFTYTADENGYQPQSELLPVAPPMP 452
           G+  +   SL  V  + ++  +       P+G P+KF Y  DE       ELL +A P P
Sbjct: 390 GVKCRLDSSLPPVRRLGMIVAEVVSARIHPEGPPLKFQYEEDELSL----ELLALASPQP 445


>AL031705-4|CAC37283.1|  837|Homo sapiens protein ( Human DNA
           sequence from clone LA16c-305C8 on chromosome 16. ).
          Length = 837

 Score = 29.9 bits (64), Expect = 7.5
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = +3

Query: 273 GISAQSSGSLKKVDNIDVLAIQGQYEYSAPDGTPVKFTYTADENGYQPQSELLPVAPPMP 452
           G+  +   SL  V  + ++  +       P+G P+KF Y  DE       ELL +A P P
Sbjct: 390 GVKCRLDSSLPPVRRLGMIVAEVVSARIHPEGPPLKFQYEEDELSL----ELLALASPQP 445


>AE006467-10|AAK61284.1|  837|Homo sapiens KIAA0683 protein.
          Length = 837

 Score = 29.9 bits (64), Expect = 7.5
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = +3

Query: 273 GISAQSSGSLKKVDNIDVLAIQGQYEYSAPDGTPVKFTYTADENGYQPQSELLPVAPPMP 452
           G+  +   SL  V  + ++  +       P+G P+KF Y  DE       ELL +A P P
Sbjct: 390 GVKCRLDSSLPPVRRLGMIVAEVVSARIHPEGPPLKFQYEEDELSL----ELLALASPQP 445


>AB014583-1|BAA31658.3|  844|Homo sapiens KIAA0683 protein protein.
          Length = 844

 Score = 29.9 bits (64), Expect = 7.5
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = +3

Query: 273 GISAQSSGSLKKVDNIDVLAIQGQYEYSAPDGTPVKFTYTADENGYQPQSELLPVAPPMP 452
           G+  +   SL  V  + ++  +       P+G P+KF Y  DE       ELL +A P P
Sbjct: 397 GVKCRLDSSLPPVRRLGMIVAEVVSARIHPEGPPLKFQYEEDELSL----ELLALASPQP 452


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,701,596
Number of Sequences: 237096
Number of extensions: 1646848
Number of successful extensions: 7595
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7590
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)