Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11k10f
(630 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O43809 Cluster: Cleavage and polyadenylation specificit... 281 7e-75
UniRef50_Q259F9 Cluster: H0124B04.17 protein; n=14; Eukaryota|Re... 178 8e-44
UniRef50_Q4WE76 Cluster: Cleavage and polyadenylation specific f... 169 4e-41
UniRef50_O65606 Cluster: Putative uncharacterized protein M7J2.8... 164 1e-39
UniRef50_Q6C1Q0 Cluster: Similar to wi|NCU09014.1 Neurospora cra... 149 5e-35
UniRef50_A7PE32 Cluster: Chromosome chr11 scaffold_13, whole gen... 144 2e-33
UniRef50_Q012R9 Cluster: MRNA cleavage factor I subunit; n=2; Os... 137 2e-31
UniRef50_Q94AF0 Cluster: AT4g29820/F27B13_60; n=3; Magnoliophyta... 135 9e-31
UniRef50_Q4PBX0 Cluster: Putative uncharacterized protein; n=2; ... 133 3e-30
UniRef50_Q5KEC3 Cluster: Putative uncharacterized protein; n=1; ... 97 2e-19
UniRef50_A2DA19 Cluster: Hydrolase, NUDIX family protein; n=1; T... 93 7e-18
UniRef50_Q9SZQ4 Cluster: MRNA cleavage factor subunit-like prote... 74 3e-12
UniRef50_Q7YZC1 Cluster: Pre-mRNA cleavage factor I 25 kDa subun... 71 2e-11
UniRef50_A5K9S5 Cluster: mRNA cleavage factor-like protein, puta... 65 1e-09
UniRef50_Q3LVX2 Cluster: Pre-mRNA cleavage factor I; n=1; Bigelo... 52 2e-05
UniRef50_Q4N1V1 Cluster: MRNA cleavage factor protein, putative;... 50 5e-05
UniRef50_A7ANZ8 Cluster: Putative uncharacterized protein; n=1; ... 49 8e-05
UniRef50_Q6BCA7 Cluster: Cleavage factor I 25 kDa; n=5; Trypanos... 46 7e-04
UniRef50_Q5CWT4 Cluster: NUDIX domain protein; mRNA cleavage fac... 44 0.002
UniRef50_Q9FCX1 Cluster: YcfB protein; n=1; Erwinia amylovora|Re... 38 0.20
UniRef50_A4HEN7 Cluster: Putative uncharacterized protein; n=1; ... 38 0.20
UniRef50_Q2V2W0 Cluster: Uncharacterized protein At5g63600.2; n=... 37 0.35
UniRef50_Q9A517 Cluster: MutT/nudix family protein; n=1; Cauloba... 36 0.61
UniRef50_Q9A8K7 Cluster: MutT/nudix family protein; n=2; Cauloba... 36 0.80
UniRef50_Q88FW1 Cluster: MutT/nudix family protein; n=1; Pseudom... 36 1.1
UniRef50_A1K3E0 Cluster: Bifunctional DGTP-pyrophosphohydrolase/... 36 1.1
UniRef50_A6VQQ8 Cluster: TRAP transporter, 4TM/12TM fusion prote... 35 1.4
UniRef50_UPI0000E87B8A Cluster: hypothetical protein MB2181_0617... 35 1.9
UniRef50_A7BA88 Cluster: Putative uncharacterized protein; n=1; ... 34 2.4
UniRef50_A5D2M6 Cluster: NTP pyrophosphohydrolases; n=1; Pelotom... 34 2.4
UniRef50_Q1DZ53 Cluster: Predicted protein; n=1; Coccidioides im... 34 2.4
UniRef50_Q0E8B7 Cluster: CG41452-PA; n=2; Drosophila melanogaste... 34 3.2
UniRef50_UPI0000DB7D7E Cluster: PREDICTED: similar to CG8128-PA,... 33 4.3
UniRef50_A6LW40 Cluster: NUDIX hydrolase; n=1; Clostridium beije... 33 4.3
UniRef50_A2BL65 Cluster: Universally conserved protein; n=1; Hyp... 33 4.3
UniRef50_Q67T29 Cluster: MutT-like protein; n=1; Symbiobacterium... 33 5.7
UniRef50_Q2G9K6 Cluster: NUDIX hydrolase; n=4; Sphingomonadales|... 33 5.7
UniRef50_A6V1V6 Cluster: Hydrolase, nudix family protein; n=7; P... 33 5.7
UniRef50_A3KHV3 Cluster: Putative uncharacterized protein; n=1; ... 33 5.7
UniRef50_A0NFE5 Cluster: ENSANGP00000023517; n=1; Anopheles gamb... 33 5.7
UniRef50_Q18EP3 Cluster: Mut/nudix family protein; n=1; Haloquad... 33 5.7
UniRef50_UPI000050F940 Cluster: COG0494: NTP pyrophosphohydrolas... 33 7.5
UniRef50_A6WAI7 Cluster: NUDIX hydrolase; n=1; Kineococcus radio... 33 7.5
UniRef50_A4J7A4 Cluster: NUDIX hydrolase; n=1; Desulfotomaculum ... 33 7.5
UniRef50_O18198 Cluster: Putative uncharacterized protein; n=2; ... 33 7.5
UniRef50_Q7VSW1 Cluster: Putative uncharacterized protein; n=4; ... 32 9.9
UniRef50_Q6AHM7 Cluster: MutT-like domain protein; n=1; Leifsoni... 32 9.9
UniRef50_Q2J5V9 Cluster: NUDIX hydrolase; n=2; Frankia|Rep: NUDI... 32 9.9
UniRef50_Q12FA5 Cluster: NUDIX hydrolase; n=2; Comamonadaceae|Re... 32 9.9
UniRef50_Q18K67 Cluster: Mut/nudix family protein; n=1; Haloquad... 32 9.9
>UniRef50_O43809 Cluster: Cleavage and polyadenylation specificity
factor subunit 5; n=34; Bilateria|Rep: Cleavage and
polyadenylation specificity factor subunit 5 - Homo
sapiens (Human)
Length = 227
Score = 281 bits (690), Expect = 7e-75
Identities = 124/145 (85%), Positives = 136/145 (93%)
Frame = +3
Query: 195 LTLNRSINLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHG 374
LTL R+INLYPLTNYTFGTKEPL+EKD+SV ARFQRMREEF KIGMRR+VEGVL+VHEH
Sbjct: 31 LTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHR 90
Query: 375 LPHVLLLQLGTAFFKLPGGELNPGEDEIDGLKRLLTETLGRQDGVKQEWLIEDTIGNWWR 554
LPHVLLLQLGT FFKLPGGELNPGEDE++GLKRL+TE LGRQDGV Q+W+I+D IGNWWR
Sbjct: 91 LPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGNWWR 150
Query: 555 PNFEPPQYPYIPPHITKPKEHKRLF 629
PNFEPPQYPYIP HITKPKEHK+LF
Sbjct: 151 PNFEPPQYPYIPAHITKPKEHKKLF 175
>UniRef50_Q259F9 Cluster: H0124B04.17 protein; n=14; Eukaryota|Rep:
H0124B04.17 protein - Oryza sativa (Rice)
Length = 2505
Score = 178 bits (434), Expect = 8e-44
Identities = 81/140 (57%), Positives = 94/140 (67%), Gaps = 1/140 (0%)
Frame = +3
Query: 213 INLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHGLPHVLL 392
+N+YPL NYTFGTKEP EKD SV R RM+ + K GMR SVE +LLV EH PH+LL
Sbjct: 9 VNVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILL 68
Query: 393 LQLGTAFFKLPGGELNPGEDEIDGLKRLLTETLG-RQDGVKQEWLIEDTIGNWWRPNFEP 569
LQ+G F KLPGG L PGE+EI+GLKR L L W + + + WWRPNFE
Sbjct: 69 LQIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFET 128
Query: 570 PQYPYIPPHITKPKEHKRLF 629
YPY PPHITKPKE K+LF
Sbjct: 129 VMYPYCPPHITKPKECKKLF 148
>UniRef50_Q4WE76 Cluster: Cleavage and polyadenylation specific
factor 5; n=19; Eukaryota|Rep: Cleavage and
polyadenylation specific factor 5 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 334
Score = 169 bits (412), Expect = 4e-41
Identities = 79/147 (53%), Positives = 105/147 (71%), Gaps = 6/147 (4%)
Frame = +3
Query: 207 RSINLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHGLPHV 386
++I LYPL+NYTFGTKE E+D SV AR +R+ E + K GMRR+ EGVL+ HEH PHV
Sbjct: 83 KTIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEKHGMRRTCEGVLVCHEHNHPHV 142
Query: 387 LLLQLGTAFFKLPGGELNPGEDEIDGLKRLLTETL---GRQ---DGVKQEWLIEDTIGNW 548
L+LQ+ AFFKLPG L+ +DE++G K+ L E L G Q +GV ++W I DT+ W
Sbjct: 143 LMLQIANAFFKLPGDYLHFDDDEVEGFKKRLNERLAPVGSQFSGEGVNEDWEIGDTLAQW 202
Query: 549 WRPNFEPPQYPYIPPHITKPKEHKRLF 629
WRPNFE YP++P H+T+PKE K+L+
Sbjct: 203 WRPNFETFMYPFLPGHVTRPKECKKLY 229
>UniRef50_O65606 Cluster: Putative uncharacterized protein M7J2.80;
n=3; core eudicotyledons|Rep: Putative uncharacterized
protein M7J2.80 - Arabidopsis thaliana (Mouse-ear cress)
Length = 210
Score = 164 bits (399), Expect = 1e-39
Identities = 80/159 (50%), Positives = 99/159 (62%), Gaps = 16/159 (10%)
Frame = +3
Query: 195 LTLNRSINLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHG 374
+ +++ +N YPL+NY+FGTKEP EKD SV R RM+ + K GMR SVEG+LLV EH
Sbjct: 1 MAMSQVVNTYPLSNYSFGTKEPKLEKDTSVADRLARMKINYMKEGMRTSVEGILLVQEHN 60
Query: 375 LPHVLLLQLGTAFFKLPGGELNPGED---------------EIDGLKRLLTETL-GRQDG 506
PH+LLLQ+G F KLPGG L PGE+ E DGLKR LT L G
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENGIQLPPFWVYYVVSAEADGLKRKLTSKLGGNSAA 120
Query: 507 VKQEWLIEDTIGNWWRPNFEPPQYPYIPPHITKPKEHKR 623
+ +W + + + WWRPNFE YPY PPHITKPK K+
Sbjct: 121 LVPDWTVGECVATWWRPNFETMMYPYCPPHITKPKVVKK 159
>UniRef50_Q6C1Q0 Cluster: Similar to wi|NCU09014.1 Neurospora crassa
NCU09014. 1 hypothetical protein; n=1; Yarrowia
lipolytica|Rep: Similar to wi|NCU09014.1 Neurospora
crassa NCU09014. 1 hypothetical protein - Yarrowia
lipolytica (Candida lipolytica)
Length = 262
Score = 149 bits (361), Expect = 5e-35
Identities = 73/146 (50%), Positives = 94/146 (64%), Gaps = 5/146 (3%)
Frame = +3
Query: 207 RSINLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHGLPHV 386
++I LYP +NY F TK+ E+D SV AR QR++ + + GM R VEGV L HE G P+V
Sbjct: 26 QTIRLYPSSNYVFATKDAQVERDVSVQARMQRLKSMYDESGMLRYVEGVFLCHEFGTPYV 85
Query: 387 LLLQLGTAFFKLPGGELNPG-EDEIDGLKRLLTETLGRQDGVKQE----WLIEDTIGNWW 551
LLQL FFKLPG L+P EDE GL R L + L ++G QE W + D + WW
Sbjct: 86 FLLQLPNNFFKLPGEYLDPDEEDEEGGLLRKLADRLSPENGEDQENSKSWKVLDCLAQWW 145
Query: 552 RPNFEPPQYPYIPPHITKPKEHKRLF 629
RPNFE YP++PPHI++PKE K+ F
Sbjct: 146 RPNFEVFMYPFLPPHISRPKECKKTF 171
>UniRef50_A7PE32 Cluster: Chromosome chr11 scaffold_13, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr11 scaffold_13, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 291
Score = 144 bits (348), Expect = 2e-33
Identities = 65/143 (45%), Positives = 93/143 (65%), Gaps = 1/143 (0%)
Frame = +3
Query: 204 NRSINLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHGLPH 383
N +++YPL+ Y FG+K+PL K+ ++ R RM+ + + G R V V+LV PH
Sbjct: 95 NHVLDIYPLSCYYFGSKDPLLLKEETLADRILRMKSNYSRYGSRTCVVAVILVELFKHPH 154
Query: 384 VLLLQLGTAFFKLPGGELNPGEDEIDGLKRLLTETLG-RQDGVKQEWLIEDTIGNWWRPN 560
+LLLQ+ +FFKLPGG L PGE EI+GLKR L+ L +DG +W + + +G WWRP+
Sbjct: 155 LLLLQVKNSFFKLPGGRLRPGESEINGLKRKLSRKLSVNEDGDGSDWEVGECLGMWWRPD 214
Query: 561 FEPPQYPYIPPHITKPKEHKRLF 629
FE YPY+PP++ PKE +LF
Sbjct: 215 FETLLYPYLPPNVKNPKECTKLF 237
>UniRef50_Q012R9 Cluster: MRNA cleavage factor I subunit; n=2;
Ostreococcus|Rep: MRNA cleavage factor I subunit -
Ostreococcus tauri
Length = 279
Score = 137 bits (332), Expect = 2e-31
Identities = 66/144 (45%), Positives = 92/144 (63%), Gaps = 3/144 (2%)
Frame = +3
Query: 207 RSINLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHGLPHV 386
R ++++ L NYTFGTK EKD+S AR RM+ ++ + G RRSV + +V +H PH+
Sbjct: 84 RVVDVHALGNYTFGTKRARGEKDSSAAARLLRMKTQYEREGKRRSVGAICMVSQHRTPHI 143
Query: 387 LLLQLGTAFFKLPGGELNPGEDEIDGLKRLLTETL--GRQDGV-KQEWLIEDTIGNWWRP 557
LLLQ+ FKLPGG L GE E +GL R + L R+DG+ E+ + D + W+R
Sbjct: 144 LLLQITPTTFKLPGGRLRAGEGEREGLARKMQNKLQPEREDGLGAYEFDVGDQVATWYRT 203
Query: 558 NFEPPQYPYIPPHITKPKEHKRLF 629
+FEP YPY+P HITKPKE ++F
Sbjct: 204 SFEPQMYPYLPAHITKPKEEHKIF 227
>UniRef50_Q94AF0 Cluster: AT4g29820/F27B13_60; n=3;
Magnoliophyta|Rep: AT4g29820/F27B13_60 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 222
Score = 135 bits (326), Expect = 9e-31
Identities = 66/140 (47%), Positives = 87/140 (62%), Gaps = 1/140 (0%)
Frame = +3
Query: 213 INLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHGLPHVLL 392
++LYPL++Y FG+KE L KD + R R++ + G+R VE VLLV PHVLL
Sbjct: 29 VDLYPLSSYYFGSKEALRVKDEIISDRVIRLKSNYAAHGLRTCVEAVLLVELFKHPHVLL 88
Query: 393 LQLGTAFFKLPGGELNPGEDEIDGLKRLLTETLGRQDGV-KQEWLIEDTIGNWWRPNFEP 569
LQ + FKLPGG L PGE +I+GLKR L L + V + + + IG WWRPNFE
Sbjct: 89 LQYRNSIFKLPGGRLRPGESDIEGLKRKLASKLSVNENVGVSGYEVGECIGMWWRPNFET 148
Query: 570 PQYPYIPPHITKPKEHKRLF 629
YP++PP+I PKE +LF
Sbjct: 149 LMYPFLPPNIKHPKECTKLF 168
>UniRef50_Q4PBX0 Cluster: Putative uncharacterized protein; n=2;
Ustilago|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 258
Score = 133 bits (322), Expect = 3e-30
Identities = 65/136 (47%), Positives = 90/136 (66%), Gaps = 14/136 (10%)
Frame = +3
Query: 201 LNRSINLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHGLP 380
+++++ LYP+T +TF TK+ E+D SV AR QR++ + +GMRR+VE VL+VHEHG P
Sbjct: 1 MSQTLTLYPVTAFTFTTKDAQPEEDPSVAARLQRLQNNYEDLGMRRTVEAVLVVHEHGHP 60
Query: 381 HVLLLQLGTAFFKLPGGELNPGEDEIDGLKRLLTETLG-----------RQDGVKQ---E 518
HVL+LQ+ AFFKLPG L PGEDE++G+K L E LG +G + +
Sbjct: 61 HVLMLQIANAFFKLPGDYLKPGEDEVEGIKARLDERLGPVESDPNSFGPNGEGRNKDDGD 120
Query: 519 WLIEDTIGNWWRPNFE 566
W I+D + WWRPNFE
Sbjct: 121 WEIQDCLAQWWRPNFE 136
>UniRef50_Q5KEC3 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 229
Score = 97.5 bits (232), Expect = 2e-19
Identities = 60/176 (34%), Positives = 92/176 (52%), Gaps = 36/176 (20%)
Frame = +3
Query: 210 SINLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLV--------- 362
+I +PL NY F +E E+D SV R +R+ +++ + G RRSVE +++V
Sbjct: 8 TIEAFPLRNYLFIEREGQPEEDNSVTNRLKRLEDQYKESGTRRSVEAIMVVTVGNSISPS 67
Query: 363 --------HEHGLPHVLLLQLGTAFFKLPGGELNPGEDEIDGLKRLLTETLG-------- 494
HG HVL+LQ+ AF+KLPGG L+P E + +GL L E LG
Sbjct: 68 RALLNLPVQVHGFAHVLVLQVANAFYKLPGGYLDPSESDAEGLITRLNEQLGVPVTTLKG 127
Query: 495 -RQDGVK----------QEWLIEDTIGNWWRPNFEPPQYPYIPPHITKPKEHKRLF 629
+D + ++W + D + W+RP+F+ YPY P H++ PKE K+L+
Sbjct: 128 KDEDDLPRTVWLAPEGGRDWEVRDCLSVWYRPHFDTFLYPYAPAHVSYPKECKKLY 183
>UniRef50_A2DA19 Cluster: Hydrolase, NUDIX family protein; n=1;
Trichomonas vaginalis G3|Rep: Hydrolase, NUDIX family
protein - Trichomonas vaginalis G3
Length = 191
Score = 92.7 bits (220), Expect = 7e-18
Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 1/141 (0%)
Frame = +3
Query: 210 SINLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHGLPHVL 389
S+ ++ L+NY FG E E++ + R ++++E F G +SV ++L HEH + +L
Sbjct: 2 SLRIHKLSNYRFGASEDEEEEEKAHTDRMEKIKEIFAVEGTVKSVRCIILAHEHNITTIL 61
Query: 390 LLQ-LGTAFFKLPGGELNPGEDEIDGLKRLLTETLGRQDGVKQEWLIEDTIGNWWRPNFE 566
LL+ ++PGG + GE++ +KR+LT+ +G E+ I D + W+RP F
Sbjct: 62 LLKNKNKKKLQMPGGIVRTGEEDEAAIKRILTKKFRIVEG---EFDIGDHVATWYRPQFS 118
Query: 567 PPQYPYIPPHITKPKEHKRLF 629
YPY+P HIT+ KE ++ +
Sbjct: 119 EYLYPYLPAHITQAKEIEKWY 139
>UniRef50_Q9SZQ4 Cluster: MRNA cleavage factor subunit-like protein;
n=1; Arabidopsis thaliana|Rep: MRNA cleavage factor
subunit-like protein - Arabidopsis thaliana (Mouse-ear
cress)
Length = 185
Score = 73.7 bits (173), Expect = 3e-12
Identities = 53/139 (38%), Positives = 70/139 (50%)
Frame = +3
Query: 213 INLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHGLPHVLL 392
++LYPL++Y FG+KE L R+++E ++ H PHVLL
Sbjct: 29 VDLYPLSSYYFGSKEAL------------RVKDE-------------IISDRH--PHVLL 61
Query: 393 LQLGTAFFKLPGGELNPGEDEIDGLKRLLTETLGRQDGVKQEWLIEDTIGNWWRPNFEPP 572
LQ + FKLPGG L PGE GL +L V + IG WWRPNFE
Sbjct: 62 LQYRNSIFKLPGGRLRPGES---GLVCCFLASLCINIAVGE------CIGMWWRPNFETL 112
Query: 573 QYPYIPPHITKPKEHKRLF 629
YP++PP+I PKE +LF
Sbjct: 113 MYPFLPPNIKHPKECTKLF 131
>UniRef50_Q7YZC1 Cluster: Pre-mRNA cleavage factor I 25 kDa subunit;
n=3; Entamoeba histolytica|Rep: Pre-mRNA cleavage factor
I 25 kDa subunit - Entamoeba histolytica
Length = 236
Score = 70.9 bits (166), Expect = 2e-11
Identities = 46/142 (32%), Positives = 77/142 (54%), Gaps = 8/142 (5%)
Frame = +3
Query: 213 INLYPLTNYTFGTKEPLFE-KDASVPARFQRMREEFCKIGM-RRSVEGVLLVHEHGLPHV 386
+ +YP+ NY KE L + K + + +++ K + R SV GV+LVH++ PH+
Sbjct: 40 LKIYPIENYQIDKKEKLDKLKHQTFGYQMDQLKISVEKNHVPRTSVYGVILVHKNNFPHL 99
Query: 387 LLLQLGTAF-----FKLPGGELNPGEDE-IDGLKRLLTETLGRQDGVKQEWLIEDTIGNW 548
L+LQ + L GG L GED+ ++GLKR L + + + E I + +G +
Sbjct: 100 LVLQSNLSMDLKDEIHLVGGRLKIGEDDPVEGLKRKLRKKMSMEYITHYE--IGELLGTF 157
Query: 549 WRPNFEPPQYPYIPPHITKPKE 614
+R ++ YPYIP H+++ KE
Sbjct: 158 YRIEYDKNLYPYIPVHVSQVKE 179
>UniRef50_A5K9S5 Cluster: mRNA cleavage factor-like protein,
putative; n=12; root|Rep: mRNA cleavage factor-like
protein, putative - Plasmodium vivax
Length = 267
Score = 65.3 bits (152), Expect = 1e-09
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 15/152 (9%)
Frame = +3
Query: 219 LYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHGLPHVLLLQ 398
+YP NY F E L K + ++ + + G+R S ++L H + PH+LLLQ
Sbjct: 59 VYPQANYEFNIDEKLKSKFVMDADKCKKRINTYNQNGIRSSALAIILCHRYEYPHLLLLQ 118
Query: 399 -LGTAFFKLPGGELNPGEDEIDGLKRLLTETLGR--------------QDGVKQEWLIED 533
+ + + L G+ E D LK+ L + + + Q + I +
Sbjct: 119 NVESQTYYLLSGKYRSWEKPRDVLKKKLQKYVNQIRDMHFATSHFNAEQKESEDPIEIGE 178
Query: 534 TIGNWWRPNFEPPQYPYIPPHITKPKEHKRLF 629
+G WW+ F PY+P HIT+PKE+ RL+
Sbjct: 179 FLGEWWKTQFNSVYLPYLPAHITRPKEYIRLY 210
>UniRef50_Q3LVX2 Cluster: Pre-mRNA cleavage factor I; n=1;
Bigelowiella natans|Rep: Pre-mRNA cleavage factor I -
Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 202
Score = 51.6 bits (118), Expect = 2e-05
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 1/132 (0%)
Frame = +3
Query: 222 YPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHGLPHVLLLQL 401
YP+ NY F T + + KD + + QR++ +F K G S + +++V +H P+VLL +
Sbjct: 5 YPIENYKFYTSKAVKRKDRKMRHKLQRLKYKFLKFGSFASRKSIVIVTKHKHPYVLLFRS 64
Query: 402 GTAFFKLPGGELNPGEDEIDGLKRLLTETLGR-QDGVKQEWLIEDTIGNWWRPNFEPPQY 578
F + + + + D LK++ E + + + + + + R FE Y
Sbjct: 65 FNDKFDIIDID-KLLKFKSDHLKKVNLENVNNVSKNLFTKSMNSRLVSIFLRQGFESKLY 123
Query: 579 PYIPPHITKPKE 614
PY PHI K+
Sbjct: 124 PYCLPHIKYTKQ 135
>UniRef50_Q4N1V1 Cluster: MRNA cleavage factor protein, putative;
n=2; Theileria|Rep: MRNA cleavage factor protein,
putative - Theileria parva
Length = 226
Score = 50.0 bits (114), Expect = 5e-05
Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Frame = +3
Query: 327 GMRRSVEGVLLVHEHGLPHVLLLQLGT-AFFKLPGGEL----NPGEDEIDGLKRLLTETL 491
GMR +V GV+L H G P VLLL+ L GG+ NP E L R +T T
Sbjct: 64 GMRITVCGVILSHRKGFPFVLLLKRDLDKSVGLLGGKCKSFENPKEVLSSKLARFITSTK 123
Query: 492 GR-QDGVKQ--EWL-IEDTIGNWWRPNFEPPQYPYIPPHITKPKEHKRLF 629
+ Q +K+ E + + + + ++WR +F PY+P H +PKE L+
Sbjct: 124 HKHQLNIKETIETIQVGELLADFWRCDFNTEPLPYLPLHTNRPKEKISLY 173
>UniRef50_A7ANZ8 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 357
Score = 49.2 bits (112), Expect = 8e-05
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 9/105 (8%)
Frame = +3
Query: 327 GMRRSVEGVLLVHEHGLPHVLLLQLGTAFFKLPGGELNPGEDEIDGLKRLLTETLGR-QD 503
G+R +V G++L H +G P +L+L+ + L GG+ E+ + LK L + +
Sbjct: 59 GLRITVYGLILCHRNGFPCILVLRDTSGNIGLLGGKCKSFENPREVLKLKLARFVSTSRK 118
Query: 504 GVKQ--------EWLIEDTIGNWWRPNFEPPQYPYIPPHITKPKE 614
GV Q ++ + +G +WR ++ PY+P HI +P+E
Sbjct: 119 GVHQLNVRANVDTIIVGEFMGEFWRAEYDSDVLPYLPLHINRPRE 163
>UniRef50_Q6BCA7 Cluster: Cleavage factor I 25 kDa; n=5;
Trypanosomatidae|Rep: Cleavage factor I 25 kDa -
Trypanosoma cruzi
Length = 292
Score = 46.0 bits (104), Expect = 7e-04
Identities = 57/175 (32%), Positives = 76/175 (43%), Gaps = 49/175 (28%)
Frame = +3
Query: 252 KEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHGLPHV-LLLQLGT------- 407
K PL EK S+ AR REE C SVEGVLLVH H PHV LL T
Sbjct: 72 KTPL-EKLMSLKAR---CREEQCV----HSVEGVLLVHVHDHPHVLLLRHANTKASAHSR 123
Query: 408 ----------AFFKLPGGELNPGE-DEIDGLKRLLTETLGRQDGV---------KQEWLI 527
A F LPGG GE +EI L++L + L + + E ++
Sbjct: 124 VLPATNTNNLAVFSLPGGRCRKGEPEEICLLRKLGRDLLNEKKSLMASRTAESESSEMVV 183
Query: 528 E-------------------DTIGNWWRPNFEPPQYPYIPPHITKP--KEHKRLF 629
E + +G W+RP+F+P YPY+P H+ + KE + +F
Sbjct: 184 EVGASHSLAVAPSSSSFRVGEALGRWYRPHFDPFMYPYVPAHVAESDVKEVRTVF 238
>UniRef50_Q5CWT4 Cluster: NUDIX domain protein; mRNA cleavage
factor-like protein Im like, plant+animal group; n=3;
Cryptosporidium|Rep: NUDIX domain protein; mRNA cleavage
factor-like protein Im like, plant+animal group -
Cryptosporidium parvum Iowa II
Length = 277
Score = 44.4 bits (100), Expect = 0.002
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +3
Query: 525 IEDTIGNWWRPNFEPPQYPYIPPHITKPKEHKRLF 629
+ + +G WWR F PY+PPH T+PKE R++
Sbjct: 188 VGEYLGTWWRTEFNYSPLPYLPPHSTRPKETIRIY 222
Score = 42.7 bits (96), Expect = 0.007
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +3
Query: 177 QNPSMNLTLNRSINLYPLTNYTFGTKEPLFEKDASVPAR----FQRMREEFCKIGMRRSV 344
Q+ + N+ S +YPL NY ++ E +S+P F + F K G+ RSV
Sbjct: 39 QSMATNVDHEPSWLIYPLKNYGIRVQDNSDEIQSSIPINEMNGFNVKVDNFLKDGIGRSV 98
Query: 345 EGVLLVHEHGLPHVLLLQ 398
++L H + PHV+LLQ
Sbjct: 99 AALMLTHRYLCPHVVLLQ 116
>UniRef50_Q9FCX1 Cluster: YcfB protein; n=1; Erwinia amylovora|Rep:
YcfB protein - Erwinia amylovora (Fire blight bacteria)
Length = 132
Score = 37.9 bits (84), Expect = 0.20
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = +3
Query: 354 LLVHEHGLPHVLLLQLGTAFFKLPGGELNPGEDEIDGLKRLLTETLGRQ 500
+++H+ L +L + GTA F PGG+ GED + LKR L E LG Q
Sbjct: 10 IIIHQRSL--LLTRKRGTAIFISPGGKPLAGEDHLSCLKRELDEELGVQ 56
>UniRef50_A4HEN7 Cluster: Putative uncharacterized protein; n=1;
Leishmania braziliensis|Rep: Putative uncharacterized
protein - Leishmania braziliensis
Length = 271
Score = 37.9 bits (84), Expect = 0.20
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 525 IEDTIGNWWRPNFEPPQYPYIPPHI 599
I + + W+RP+F P YPY+P HI
Sbjct: 178 IGEVLSTWYRPHFTPHMYPYVPAHI 202
Score = 35.5 bits (78), Expect = 1.1
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = +3
Query: 297 QRMREEFCKIGMRRSVEGVLLVHEHGLPHVLLLQ 398
+R EE C SVEGVLLVH H PHVLL++
Sbjct: 58 KRCEEELCV----HSVEGVLLVHLHRHPHVLLMK 87
>UniRef50_Q2V2W0 Cluster: Uncharacterized protein At5g63600.2; n=5;
Arabidopsis thaliana|Rep: Uncharacterized protein
At5g63600.2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 326
Score = 37.1 bits (82), Expect = 0.35
Identities = 31/93 (33%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Frame = +3
Query: 348 GVLLVHEHGLPHVLLLQL---GTAFFKLPGGELN--PGEDEIDGLKRLLTETLGRQDGVK 512
GV V HG+P L+ QL GT FF+LP E E++ +G K+ + D
Sbjct: 58 GVFQVVNHGIPTELMRQLQMVGTQFFELPDAEKETVAKEEDFEGYKKNYLGGINNWDEHL 117
Query: 513 QEWLIEDTIGN--WWRPNFEPPQYPYIPPHITK 605
L +I N +W N PPQY + TK
Sbjct: 118 FHRLSPPSIINYKYWPKN--PPQYREVTEEYTK 148
>UniRef50_Q9A517 Cluster: MutT/nudix family protein; n=1;
Caulobacter vibrioides|Rep: MutT/nudix family protein -
Caulobacter crescentus (Caulobacter vibrioides)
Length = 238
Score = 36.3 bits (80), Expect = 0.61
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +3
Query: 321 KIGMRRSVEGVLLVHEHGLPHVL---LLQLGTAFFKLPGGELNPGEDEIDGLKRLLTETL 491
K+G + G++ +H+ G ++ L ++LP G GED +DG KR L E +
Sbjct: 84 KVGFKNQAIGIVPLHDDGTVTLVGQNRFSLANYSWELPEGGAPHGEDPLDGAKRELAEEV 143
Query: 492 GRQ 500
G Q
Sbjct: 144 GLQ 146
>UniRef50_Q9A8K7 Cluster: MutT/nudix family protein; n=2;
Caulobacter|Rep: MutT/nudix family protein - Caulobacter
crescentus (Caulobacter vibrioides)
Length = 131
Score = 35.9 bits (79), Expect = 0.80
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +3
Query: 384 VLLLQLGTAFFKLPGGELNPGEDEIDGLKRLLTETLG 494
+L+ + GTA F PGG+ + GED++ L R L E LG
Sbjct: 20 LLVRKRGTAIFMKPGGKRDAGEDDLTTLARELREELG 56
>UniRef50_Q88FW1 Cluster: MutT/nudix family protein; n=1;
Pseudomonas putida KT2440|Rep: MutT/nudix family protein
- Pseudomonas putida (strain KT2440)
Length = 146
Score = 35.5 bits (78), Expect = 1.1
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +3
Query: 384 VLLLQLGTAFFKLPGGELNPGEDEIDGLKRLLTETLGRQ 500
VLL++ + + LPGG+++PGE +++ +R L E G Q
Sbjct: 32 VLLVRKEASEWSLPGGKIDPGETQLEAARRELCEETGMQ 70
>UniRef50_A1K3E0 Cluster: Bifunctional
DGTP-pyrophosphohydrolase/Thiamine-phosphate
diphosphorylase; n=5; Betaproteobacteria|Rep:
Bifunctional
DGTP-pyrophosphohydrolase/Thiamine-phosphate
diphosphorylase - Azoarcus sp. (strain BH72)
Length = 318
Score = 35.5 bits (78), Expect = 1.1
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3
Query: 411 FFKLPGGELNPGEDEIDGLKRLLTETLGRQDGVKQEWLIED 533
+++ PGG++ PGE D LKR L E LG + WL +
Sbjct: 37 YWEFPGGKVEPGESAADALKRELAEELGIVVPHVRPWLTRE 77
>UniRef50_A6VQQ8 Cluster: TRAP transporter, 4TM/12TM fusion protein
precursor; n=1; Actinobacillus succinogenes 130Z|Rep:
TRAP transporter, 4TM/12TM fusion protein precursor -
Actinobacillus succinogenes 130Z
Length = 628
Score = 35.1 bits (77), Expect = 1.4
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = -3
Query: 367 SCTNNTPSTDLL-IPILQNSSRILWNLAGTDASFSNSGSLVPNV*FVSGYKLIDLLRVKF 191
S NT ST +L IPI++ S A T+A S G L+P + ++ + + D+L V +
Sbjct: 231 SAVANTTSTGVLTIPIMKRSGYTTEQAAATEAIASTGGQLMPPIMGIAAFVMADMLGVPY 290
>UniRef50_UPI0000E87B8A Cluster: hypothetical protein MB2181_06175;
n=1; Methylophilales bacterium HTCC2181|Rep:
hypothetical protein MB2181_06175 - Methylophilales
bacterium HTCC2181
Length = 303
Score = 34.7 bits (76), Expect = 1.9
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Frame = +3
Query: 348 GVLLVHEHGLPHVLLLQ-----LGTAFFKLPGGELNPGEDEIDGLKRLLTETLGRQDGVK 512
GVL+ H++ L LL Q + +++ PGG++ GE I LKR L E +G
Sbjct: 2 GVLINHDNKL---LLAQRPAKKTWSGWWEFPGGKIERGETPIQALKRELNEEIGVTVSSA 58
Query: 513 QEWLIED 533
++W++ +
Sbjct: 59 EKWIVRE 65
>UniRef50_A7BA88 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 139
Score = 34.3 bits (75), Expect = 2.4
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +3
Query: 414 FKLPGGELNPGEDEIDGLKRLLTETLGRQDGVKQEWLIEDTIGNWW 551
F+LPGG++ GED L R + E LG + + + E G WW
Sbjct: 35 FELPGGKIEEGEDPTAALTREIAEELGARLTIGERVCPEG--GQWW 78
>UniRef50_A5D2M6 Cluster: NTP pyrophosphohydrolases; n=1;
Pelotomaculum thermopropionicum SI|Rep: NTP
pyrophosphohydrolases - Pelotomaculum thermopropionicum
SI
Length = 178
Score = 34.3 bits (75), Expect = 2.4
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +3
Query: 345 EGVLLVHEHGLPHVLLLQLGTAFFKLPGGELNPGEDEIDGLKRLLTETLGRQDG 506
E +LLV ++ P +G ++P G+L PGED +D +R L E G + G
Sbjct: 55 EELLLVRQYRHP------VGKTLLEIPAGKLEPGEDPLDCARRELLEETGYEAG 102
>UniRef50_Q1DZ53 Cluster: Predicted protein; n=1; Coccidioides
immitis|Rep: Predicted protein - Coccidioides immitis
Length = 118
Score = 34.3 bits (75), Expect = 2.4
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 426 GGELNPGEDEIDGLKRLLTETLGRQDGVKQEWLIEDTIGNW-WRPNFEP 569
G + +P E LKR+ E+ GR + Q WL D + N W NF P
Sbjct: 9 GHDWDPNELSQHKLKRVFPESEGRVTALSQHWLRNDDVHNKNWLSNFRP 57
>UniRef50_Q0E8B7 Cluster: CG41452-PA; n=2; Drosophila
melanogaster|Rep: CG41452-PA - Drosophila melanogaster
(Fruit fly)
Length = 399
Score = 33.9 bits (74), Expect = 3.2
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 123 PPGNKQWPARPGLQHQISQNPSMNLTLNR 209
P +WP RPG+ +S N NLT+NR
Sbjct: 38 PKSPPRWPIRPGVMLHVSSNTKENLTVNR 66
>UniRef50_UPI0000DB7D7E Cluster: PREDICTED: similar to CG8128-PA,
partial; n=1; Apis mellifera|Rep: PREDICTED: similar to
CG8128-PA, partial - Apis mellifera
Length = 222
Score = 33.5 bits (73), Expect = 4.3
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +3
Query: 408 AFFKLPGGELNPGEDEIDGLKRLLTETLGRQ 500
A +KLPGG +NPGE+ + +KR + E G Q
Sbjct: 126 AMWKLPGGYVNPGENLEEAVKREILEETGIQ 156
>UniRef50_A6LW40 Cluster: NUDIX hydrolase; n=1; Clostridium
beijerinckii NCIMB 8052|Rep: NUDIX hydrolase -
Clostridium beijerinckii NCIMB 8052
Length = 179
Score = 33.5 bits (73), Expect = 4.3
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +3
Query: 321 KIGMRRSVEGVLLVHEHGLPHVLLLQLGTAFFKLPGGELNPGEDEIDGLKRLLTETLG 494
KI R +V G+++ + +L++ +K PGG + E ID LKR + E G
Sbjct: 20 KINFREAVRGIIIKDKK----ILMVHSKNKDYKFPGGGMKKDEGHIDALKREVEEETG 73
>UniRef50_A2BL65 Cluster: Universally conserved protein; n=1;
Hyperthermus butylicus DSM 5456|Rep: Universally
conserved protein - Hyperthermus butylicus (strain DSM
5456 / JCM 9403)
Length = 150
Score = 33.5 bits (73), Expect = 4.3
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +3
Query: 387 LLLQLGTA--FFKLPGGELNPGEDEIDGLKRLLTETLG 494
+L+QL F++LPGG + P E + GL+R + E LG
Sbjct: 17 ILVQLSKKGDFYRLPGGRIRPDETIVQGLQREVHEELG 54
>UniRef50_Q67T29 Cluster: MutT-like protein; n=1; Symbiobacterium
thermophilum|Rep: MutT-like protein - Symbiobacterium
thermophilum
Length = 150
Score = 33.1 bits (72), Expect = 5.7
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +3
Query: 315 FCKIGMRRSVEGVLLVHEHGLPHVLLLQLGTA-FFKLPGGELNPGEDEIDGLKRLLTETL 491
F K+ R+ ++ + G VL L+ A + LPGG L PGE +GL+R E L
Sbjct: 18 FLKLNPRKVAAHAVICDDQG--RVLALKSRYADVWLLPGGGLKPGEHLDEGLRRECLEEL 75
Query: 492 GRQDGVK 512
G + V+
Sbjct: 76 GAEVAVE 82
>UniRef50_Q2G9K6 Cluster: NUDIX hydrolase; n=4;
Sphingomonadales|Rep: NUDIX hydrolase - Novosphingobium
aromaticivorans (strain DSM 12444)
Length = 204
Score = 33.1 bits (72), Expect = 5.7
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 348 GVLLVHEHGLPHVLLLQLGTAFFKLPGGELNPGEDEIDGLKRLLTETLG-RQDGVK 512
GVLL+H P + G A F PGG+L+PGE ++ R E LG R + VK
Sbjct: 54 GVLLIHR---PSHMRAHPGQAAF--PGGKLDPGETPVEAALREAYEELGIRPEDVK 104
>UniRef50_A6V1V6 Cluster: Hydrolase, nudix family protein; n=7;
Pseudomonas|Rep: Hydrolase, nudix family protein -
Pseudomonas aeruginosa PA7
Length = 152
Score = 33.1 bits (72), Expect = 5.7
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +3
Query: 384 VLLLQLGTAFFKLPGGELNPGEDEIDGLKRLLTETL 491
+L+ + GT F LPGG+ PGE + L+R L E L
Sbjct: 21 LLVRKRGTQAFMLPGGKREPGETPLAALQRELLEEL 56
>UniRef50_A3KHV3 Cluster: Putative uncharacterized protein; n=1;
Streptomyces ambofaciens ATCC 23877|Rep: Putative
uncharacterized protein - Streptomyces ambofaciens ATCC
23877
Length = 275
Score = 33.1 bits (72), Expect = 5.7
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Frame = +3
Query: 201 LNRSINLYPLTNYTFGTKEPLFEKDASVPARFQRMR-EEFCKIGMRRSVEGVL-LVHEHG 374
L++ ++YP G F+ + P R M E++ + +V G L ++ EH
Sbjct: 82 LSKLRSIYPPAKEFLGVLALAFDHRPARPGRPMPMTAEKYAQTVPHHTVYGCLYILDEHD 141
Query: 375 LPHVLLLQLGTAFFKLPGGELN-PGEDEIDGLKRLLTETLGRQDGV 509
P L G+ ++ PGG L+ P ED + +R + G + G+
Sbjct: 142 RPVQLRSVYGSRLWQFPGGNLDAPDEDPLLTARREAVDETGLELGL 187
>UniRef50_A0NFE5 Cluster: ENSANGP00000023517; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000023517 - Anopheles gambiae
str. PEST
Length = 430
Score = 33.1 bits (72), Expect = 5.7
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +3
Query: 111 AVQGPPGNKQWPARPGLQH----QISQNPSMNLTLNRSINLYPLTNYTFGTKEPLFEKDA 278
AV+G G ++ PARP L+H Q+S ++R+++ P T T P +
Sbjct: 5 AVRGRTGRRELPARPQLRHPVHAQLSAGVLPAAAVHRAVSAAPHTERTARASSPCTTIRS 64
Query: 279 SVPAR 293
++PAR
Sbjct: 65 ALPAR 69
>UniRef50_Q18EP3 Cluster: Mut/nudix family protein; n=1;
Haloquadratum walsbyi DSM 16790|Rep: Mut/nudix family
protein - Haloquadratum walsbyi (strain DSM 16790)
Length = 163
Score = 33.1 bits (72), Expect = 5.7
Identities = 22/52 (42%), Positives = 28/52 (53%)
Frame = +3
Query: 339 SVEGVLLVHEHGLPHVLLLQLGTAFFKLPGGELNPGEDEIDGLKRLLTETLG 494
SV GVL HG +++ + ++LPGG L P E I GLKR L E G
Sbjct: 11 SVRGVL-TDPHG-QLIVVQRSSDRQWELPGGRLAPDEPPIRGLKRELIEETG 60
>UniRef50_UPI000050F940 Cluster: COG0494: NTP pyrophosphohydrolases
including oxidative damage repair enzymes; n=1;
Brevibacterium linens BL2|Rep: COG0494: NTP
pyrophosphohydrolases including oxidative damage repair
enzymes - Brevibacterium linens BL2
Length = 147
Score = 32.7 bits (71), Expect = 7.5
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +3
Query: 342 VEGVLLVHEHGLPHVLLLQL-GTAFFKLPGGELNPGEDEIDGLKRLLTETLG 494
V ++L+H H P +L+++ GT F LPGG+ GE + R ++E LG
Sbjct: 6 VSALVLLHPHE-PQILMVRKEGTTSFMLPGGKPEIGESAEATIIREISEELG 56
>UniRef50_A6WAI7 Cluster: NUDIX hydrolase; n=1; Kineococcus
radiotolerans SRS30216|Rep: NUDIX hydrolase -
Kineococcus radiotolerans SRS30216
Length = 157
Score = 32.7 bits (71), Expect = 7.5
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = +3
Query: 339 SVEGVLLVHEHGLPHVLLLQLGTAF----FKLPGGELNPGEDEIDGLKRLLTETLG 494
+V G+L V E L +L + GT F LP G L GED + GL R L E +G
Sbjct: 20 AVYGILRVGEQVL---MLRRAGTTFRAGQLSLPAGHLEGGEDAVAGLLRELREEVG 72
>UniRef50_A4J7A4 Cluster: NUDIX hydrolase; n=1; Desulfotomaculum
reducens MI-1|Rep: NUDIX hydrolase - Desulfotomaculum
reducens MI-1
Length = 129
Score = 32.7 bits (71), Expect = 7.5
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 414 FKLPGGELNPGEDEIDGLKRLLTETL 491
++ PGG+LN GED DGL+R + E L
Sbjct: 32 WEFPGGKLNYGEDPKDGLRREIIEEL 57
>UniRef50_O18198 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 611
Score = 32.7 bits (71), Expect = 7.5
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = +3
Query: 486 TLGRQDGVKQEWLIEDTIGNWWRPNFEPPQ----YPYIPPHITKPKEHKRL 626
T R DG K W+ + + N+WR P Q P IPP + P + RL
Sbjct: 38 TTPRPDG-KTRWIPQYNLQNFWRRKIPPLQCGLIEPLIPPRLRSPDDFSRL 87
>UniRef50_Q7VSW1 Cluster: Putative uncharacterized protein; n=4;
Bordetella|Rep: Putative uncharacterized protein -
Bordetella pertussis
Length = 320
Score = 32.3 bits (70), Expect = 9.9
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 411 FFKLPGGELNPGEDEIDGLKRLLTETLGRQDGVKQEWL 524
+++LPGG+L PGE + L R L E LG + W+
Sbjct: 34 WWELPGGKLEPGETVLQALARELHEELGIRVTEAHPWV 71
>UniRef50_Q6AHM7 Cluster: MutT-like domain protein; n=1; Leifsonia
xyli subsp. xyli|Rep: MutT-like domain protein -
Leifsonia xyli subsp. xyli
Length = 143
Score = 32.3 bits (70), Expect = 9.9
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 402 GTAFFKLPGGELNPGEDEIDGLKRLLTETLG 494
G + + LPGG + PGED +D + R + E G
Sbjct: 29 GRSGWTLPGGGIEPGEDPVDAVVREIAEETG 59
>UniRef50_Q2J5V9 Cluster: NUDIX hydrolase; n=2; Frankia|Rep: NUDIX
hydrolase - Frankia sp. (strain CcI3)
Length = 161
Score = 32.3 bits (70), Expect = 9.9
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +3
Query: 384 VLLLQLGTAFFKLPGGELNPGEDEIDGLKRLLTETLG 494
+L + G F LPGG + PGE L+RLL E G
Sbjct: 37 LLANERGQKSFHLPGGRVEPGETVQAALRRLLNEQAG 73
>UniRef50_Q12FA5 Cluster: NUDIX hydrolase; n=2; Comamonadaceae|Rep:
NUDIX hydrolase - Polaromonas sp. (strain JS666 / ATCC
BAA-500)
Length = 166
Score = 32.3 bits (70), Expect = 9.9
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 411 FFKLPGGELNPGEDEIDGLKRLLTETLGRQDGVKQEWLIE 530
+++ PGG+L GE L+R L E +G G W +E
Sbjct: 51 YWEFPGGKLEQGESVEQALRRELQEEIGITIGAVHPWKVE 90
>UniRef50_Q18K67 Cluster: Mut/nudix family protein; n=1;
Haloquadratum walsbyi DSM 16790|Rep: Mut/nudix family
protein - Haloquadratum walsbyi (strain DSM 16790)
Length = 172
Score = 32.3 bits (70), Expect = 9.9
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = +3
Query: 339 SVEGVLLVHEHGLPHVLLLQLGTAFFKLPGGELNPGEDEIDGLKRLLTETLG 494
S+ GV++ + + +++ + ++LPGG L ED +DG+ R +TE G
Sbjct: 11 SLRGVIVAPDKEV--LIMARSSDGEWELPGGRLGRHEDAVDGVHREITEETG 60
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 624,783,434
Number of Sequences: 1657284
Number of extensions: 12764276
Number of successful extensions: 38469
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 36599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38439
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46466611856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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