Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11k08r
         (341 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021366-1|AAX33514.1|  522|Drosophila melanogaster LP10213p pro...    27   6.4  
AF145601-1|AAD38576.1| 1080|Drosophila melanogaster BcDNA.GH0241...    27   6.4  
AE014134-1896|AAN10754.1| 1080|Drosophila melanogaster CG6206-PB...    27   6.4  
AE014134-1895|AAF52958.2| 1080|Drosophila melanogaster CG6206-PA...    27   6.4  
AE014297-4276|AAF56821.3| 2180|Drosophila melanogaster CG31048-P...    27   8.4  

>BT021366-1|AAX33514.1|  522|Drosophila melanogaster LP10213p
           protein.
          Length = 522

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -1

Query: 161 KRLTRTSNRNALL-LHGRNRQGGGTY*CG 78
           +R T+ SNRN      GR+R+GGG Y  G
Sbjct: 5   RRQTKLSNRNLNYGRRGRSRRGGGEYVSG 33


>AF145601-1|AAD38576.1| 1080|Drosophila melanogaster BcDNA.GH02419
           protein.
          Length = 1080

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -2

Query: 319 SVYVSVWCVFYCINGWLMFTAHLR 248
           S   SVW VF+C  G L+  A LR
Sbjct: 2   SAKTSVWLVFFCALGCLIHDADLR 25


>AE014134-1896|AAN10754.1| 1080|Drosophila melanogaster CG6206-PB,
           isoform B protein.
          Length = 1080

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -2

Query: 319 SVYVSVWCVFYCINGWLMFTAHLR 248
           S   SVW VF+C  G L+  A LR
Sbjct: 2   SAKTSVWLVFFCALGCLIHDADLR 25


>AE014134-1895|AAF52958.2| 1080|Drosophila melanogaster CG6206-PA,
           isoform A protein.
          Length = 1080

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -2

Query: 319 SVYVSVWCVFYCINGWLMFTAHLR 248
           S   SVW VF+C  G L+  A LR
Sbjct: 2   SAKTSVWLVFFCALGCLIHDADLR 25


>AE014297-4276|AAF56821.3| 2180|Drosophila melanogaster CG31048-PA
            protein.
          Length = 2180

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +2

Query: 251  QVGREHEPPINAIKNAPDRHI 313
            Q+   + PP NAI NAPD++I
Sbjct: 1410 QILGNNSPPDNAILNAPDQYI 1430


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,919,436
Number of Sequences: 53049
Number of extensions: 301428
Number of successful extensions: 403
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 403
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 798368334
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)