Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11k08f
         (397 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0300 + 20624757-20625918,20626100-20627118,20627212-20627592     27   5.5  
06_01_0936 - 7220333-7220508,7221208-7221327,7221898-7223089           27   7.2  
05_05_0165 + 22851863-22852566,22852811-22852964,22853112-228532...    26   9.6  
04_04_1433 + 33564153-33564435,33564501-33564728,33564834-335654...    26   9.6  

>01_05_0300 + 20624757-20625918,20626100-20627118,20627212-20627592
          Length = 853

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -1

Query: 259 TSRYHHLAYFCHEAVMHFGLKCGSAVL 179
           T+ +HH     H AV +FGL C  AVL
Sbjct: 14  TAHHHH-----HHAVAYFGLSCALAVL 35


>06_01_0936 - 7220333-7220508,7221208-7221327,7221898-7223089
          Length = 495

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -1

Query: 88  VGREHEPPINAIKNAPDRHIHT 23
           V   H+  INA+  APD H++T
Sbjct: 200 VAAAHDDAINAVVAAPDGHVYT 221


>05_05_0165 +
           22851863-22852566,22852811-22852964,22853112-22853261,
           22853769-22853930,22854070-22854242,22854330-22854396,
           22854556-22854722,22855216-22855374,22856187-22856276,
           22856392-22856483,22856587-22856681,22857328-22857405,
           22858364-22858459,22859132-22859206,22859290-22859381,
           22859462-22859624,22859734-22859794,22860016-22860116,
           22860567-22860614
          Length = 908

 Score = 26.2 bits (55), Expect = 9.6
 Identities = 9/27 (33%), Positives = 20/27 (74%)
 Frame = -1

Query: 223 EAVMHFGLKCGSAVLTTQTLELMSQGV 143
           E +MH+G +CG   L  Q+++++++G+
Sbjct: 777 EQIMHYGARCGRCKL--QSVKIVNKGI 801


>04_04_1433 +
           33564153-33564435,33564501-33564728,33564834-33565453,
           33566938-33567195
          Length = 462

 Score = 26.2 bits (55), Expect = 9.6
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 23  SVYVSVWCVFYCINGWLMFTA 85
           S Y+  W   YC  GWL+  A
Sbjct: 409 SAYLGYWRSAYCREGWLLMAA 429


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,488,857
Number of Sequences: 37544
Number of extensions: 195036
Number of successful extensions: 364
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 364
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 684860244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)