Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11k06f
         (631 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y14330-1|CAA74706.1| 1223|Homo sapiens jagged2 protein protein.        31   4.5  
AF111170-2|AAD15562.1| 1238|Homo sapiens Jagged2 protein.              31   4.5  
AF029779-1|AAB84216.1| 1200|Homo sapiens hJAG2.del-E6 protein.         31   4.5  
AF029778-1|AAB84215.1| 1238|Homo sapiens Jagged2 protein.              31   4.5  
AF020201-1|AAB71189.1| 1238|Homo sapiens Jagged 2 protein.             31   4.5  
AF003521-1|AAB61285.1| 1238|Homo sapiens Jagged 2 protein.             31   4.5  
AK096419-1|BAC04782.1|  520|Homo sapiens protein ( Homo sapiens ...    30   7.8  

>Y14330-1|CAA74706.1| 1223|Homo sapiens jagged2 protein protein.
          Length = 1223

 Score = 30.7 bits (66), Expect = 4.5
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = +1

Query: 4   CVSNLSKSNKFPCYNDVEDCLD--NDFRCRCVG**L*SDYSGCDLAMHQEQC*RQSP 168
           C  N +  N  PCYN    C+D  N FRC C        ++G D  ++ ++C + SP
Sbjct: 771 CTHNTNDCNPLPCYNG-GICVDGVNWFRCECA-----PGFAGPDCRINIDEC-QSSP 820


>AF111170-2|AAD15562.1| 1238|Homo sapiens Jagged2 protein.
          Length = 1238

 Score = 30.7 bits (66), Expect = 4.5
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = +1

Query: 4   CVSNLSKSNKFPCYNDVEDCLD--NDFRCRCVG**L*SDYSGCDLAMHQEQC*RQSP 168
           C  N +  N  PCYN    C+D  N FRC C        ++G D  ++ ++C + SP
Sbjct: 786 CTHNTNDCNPLPCYNG-GICVDGVNWFRCECA-----PGFAGPDCRINIDEC-QSSP 835


>AF029779-1|AAB84216.1| 1200|Homo sapiens hJAG2.del-E6 protein.
          Length = 1200

 Score = 30.7 bits (66), Expect = 4.5
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = +1

Query: 4   CVSNLSKSNKFPCYNDVEDCLD--NDFRCRCVG**L*SDYSGCDLAMHQEQC*RQSP 168
           C  N +  N  PCYN    C+D  N FRC C        ++G D  ++ ++C + SP
Sbjct: 748 CTHNTNDCNPLPCYNG-GICVDGVNWFRCECA-----PGFAGPDCRINIDEC-QSSP 797


>AF029778-1|AAB84215.1| 1238|Homo sapiens Jagged2 protein.
          Length = 1238

 Score = 30.7 bits (66), Expect = 4.5
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = +1

Query: 4   CVSNLSKSNKFPCYNDVEDCLD--NDFRCRCVG**L*SDYSGCDLAMHQEQC*RQSP 168
           C  N +  N  PCYN    C+D  N FRC C        ++G D  ++ ++C + SP
Sbjct: 786 CTHNTNDCNPLPCYNG-GICVDGVNWFRCECA-----PGFAGPDCRINIDEC-QSSP 835


>AF020201-1|AAB71189.1| 1238|Homo sapiens Jagged 2 protein.
          Length = 1238

 Score = 30.7 bits (66), Expect = 4.5
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = +1

Query: 4   CVSNLSKSNKFPCYNDVEDCLD--NDFRCRCVG**L*SDYSGCDLAMHQEQC*RQSP 168
           C  N +  N  PCYN    C+D  N FRC C        ++G D  ++ ++C + SP
Sbjct: 786 CTHNTNDCNPLPCYNG-GICVDGVNWFRCECA-----PGFAGPDCRINIDEC-QSSP 835


>AF003521-1|AAB61285.1| 1238|Homo sapiens Jagged 2 protein.
          Length = 1238

 Score = 30.7 bits (66), Expect = 4.5
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = +1

Query: 4   CVSNLSKSNKFPCYNDVEDCLD--NDFRCRCVG**L*SDYSGCDLAMHQEQC*RQSP 168
           C  N +  N  PCYN    C+D  N FRC C        ++G D  ++ ++C + SP
Sbjct: 786 CTHNTNDCNPLPCYNG-GICVDGVNWFRCECA-----PGFAGPDCRINIDEC-QSSP 835


>AK096419-1|BAC04782.1|  520|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39100 fis, clone NTONG2001587, moderately
           similar to KERATIN, TYPE II CYTOSKELETAL 4. ).
          Length = 520

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +2

Query: 488 QQKTENLKTCFLNLKQSFPTVESANNLSLVEKCAKVDEMTSCI 616
           Q +TENLK    +L+ +    E    L+L +  AKVDE+ + +
Sbjct: 340 QSQTENLKKQNASLQAAITDAEQRGELALKDAQAKVDELEAAL 382


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,385,950
Number of Sequences: 237096
Number of extensions: 1762216
Number of successful extensions: 8480
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8304
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8480
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)