Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11k06f
         (631 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L23647-8|AAK29993.1|   54|Caenorhabditis elegans Hypothetical pr...    30   1.2  
L07144-2|AAK21439.1|   54|Caenorhabditis elegans Hypothetical pr...    30   1.2  
Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr...    29   2.7  
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.      29   2.7  
Z99280-1|CAB16499.1|  225|Caenorhabditis elegans Hypothetical pr...    29   3.6  
AC084153-7|AAK84593.1|  451|Caenorhabditis elegans Hypothetical ...    28   6.3  
AC024801-4|AAF59648.4|  485|Caenorhabditis elegans Hypothetical ...    28   6.3  
AF016427-2|AAB65352.1|   54|Caenorhabditis elegans Hypothetical ...    27   8.4  

>L23647-8|AAK29993.1|   54|Caenorhabditis elegans Hypothetical
           protein ZC262.5 protein.
          Length = 54

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 18/38 (47%), Positives = 22/38 (57%)
 Frame = +2

Query: 80  AAGVLADDFSQITAVVTSQCTKNNAEDKVPEVEAALRT 193
           AAG+    +SQI A V  QCTK  A  K P  +A L+T
Sbjct: 6   AAGLNYVRYSQIAAQVVRQCTKGGANVKKP--QATLKT 41


>L07144-2|AAK21439.1|   54|Caenorhabditis elegans Hypothetical
           protein R05D3.6 protein.
          Length = 54

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 18/38 (47%), Positives = 22/38 (57%)
 Frame = +2

Query: 80  AAGVLADDFSQITAVVTSQCTKNNAEDKVPEVEAALRT 193
           AAG+    +SQI A V  QCTK  A  K P  +A L+T
Sbjct: 6   AAGLNYVRYSQIAAQVVRQCTKGGANVKKP--QATLKT 41


>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical
           protein ZK520.3a protein.
          Length = 1383

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +2

Query: 380 HINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 475
           ++ DA N T +LID    K+GD +A+ +A  G
Sbjct: 66  NVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97


>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical
           protein ZK520.3a protein.
          Length = 1383

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +2

Query: 380 HINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 475
           ++ DA N T +LID    K+GD +A+ +A  G
Sbjct: 66  NVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97


>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
          Length = 1383

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +2

Query: 380 HINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 475
           ++ DA N T +LID    K+GD +A+ +A  G
Sbjct: 66  NVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97


>Z99280-1|CAB16499.1|  225|Caenorhabditis elegans Hypothetical
           protein Y57G11B.5 protein.
          Length = 225

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 21/90 (23%), Positives = 37/90 (41%)
 Frame = +2

Query: 50  MWKTVLITIFAAGVLADDFSQITAVVTSQCTKNNAEDKVPEVEAALRTFGNCLKGLVDLN 229
           M+K+++ +   A  +A   S +T  +        AED  P   A  R F  C K + + +
Sbjct: 1   MFKSLVFSALLAYAVAAPMSSMTTAIDRIDQIFQAEDSTPACNAETRRFNACFKDINEKS 60

Query: 230 VLKTEIEEAKPNGALDEVFKKYCDKSAQLK 319
            L+   ++     +  EV +   D    LK
Sbjct: 61  RLEM-FQDVTKFPSKSEVLESVADIRKALK 89


>AC084153-7|AAK84593.1|  451|Caenorhabditis elegans Hypothetical
           protein Y22D7AL.4 protein.
          Length = 451

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +2

Query: 167 PEVEAALRTFGNCLKGLVDLNVLKTEIEEAKPN 265
           PE E  +RT G+   G++D+N  +   + A+PN
Sbjct: 64  PEFEVEIRTNGHIYAGILDINGAEPGDKGAEPN 96


>AC024801-4|AAF59648.4|  485|Caenorhabditis elegans Hypothetical
           protein Y50D7A.3a protein.
          Length = 485

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -3

Query: 614 YRRSSHQLLRIFQQGSSYWRIPQWGSSVSNLKSM 513
           Y R    +LR+ QQG   +R  QW +  +  K++
Sbjct: 241 YHRKQLMMLRLIQQGKFEFRNEQWANITAEAKNL 274


>AF016427-2|AAB65352.1|   54|Caenorhabditis elegans Hypothetical
           protein F32D1.2 protein.
          Length = 54

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
 Frame = +2

Query: 80  AAGVLADDFSQITAVVTSQCTK---NNAEDKVPEVEAALRTFGN 202
           AAG+    +SQI A +T +CTK     A  K PE    + T+ N
Sbjct: 6   AAGLNYVRYSQIAAEITRKCTKQVGGKAAVKKPEATLKITTWEN 49


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,129,576
Number of Sequences: 27780
Number of extensions: 285088
Number of successful extensions: 855
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)