Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11k04r
         (770 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119131-1|AAM50991.1|  533|Drosophila melanogaster RE35182p pro...    30   4.0  
AE014297-412|AAF51908.3|  533|Drosophila melanogaster CG15589-PA...    30   4.0  

>AY119131-1|AAM50991.1|  533|Drosophila melanogaster RE35182p
           protein.
          Length = 533

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +2

Query: 152 TKKPSPAITLPRQSRQCTPQRSMDVSNALPIY 247
           TKKP+PA+    QS Q  P  S+ +SN  P Y
Sbjct: 382 TKKPTPAVMNTFQSFQKVPSSSLLLSNYDPFY 413


>AE014297-412|AAF51908.3|  533|Drosophila melanogaster CG15589-PA
           protein.
          Length = 533

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +2

Query: 152 TKKPSPAITLPRQSRQCTPQRSMDVSNALPIY 247
           TKKP+PA+    QS Q  P  S+ +SN  P Y
Sbjct: 382 TKKPTPAVMNTFQSFQKVPSSSLLLSNYDPFY 413


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,985,737
Number of Sequences: 53049
Number of extensions: 625899
Number of successful extensions: 1159
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1159
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)