Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11k04r
         (770 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80025-1|AAD32271.1| 1064|Caenorhabditis elegans Hypothetical pr...    31   0.69 
Z81078-8|CAJ43906.1| 1071|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z81078-7|CAD92377.1| 1035|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z81078-6|CAB03079.2| 1074|Caenorhabditis elegans Hypothetical pr...    29   2.8  
AL021466-5|CAJ43908.1| 1071|Caenorhabditis elegans Hypothetical ...    29   2.8  
AL021466-3|CAD92394.1| 1035|Caenorhabditis elegans Hypothetical ...    29   2.8  
AL021466-2|CAA16284.2| 1074|Caenorhabditis elegans Hypothetical ...    29   2.8  
AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical...    29   3.7  
AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical ...    29   3.7  

>U80025-1|AAD32271.1| 1064|Caenorhabditis elegans Hypothetical protein
            F02C9.3 protein.
          Length = 1064

 Score = 31.5 bits (68), Expect = 0.69
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -1

Query: 467  QRYSTLTCFVKNRNILFSIM*EILGFVFYCLMSLLYPGCILSEISLIYS 321
            +R  TL  F+ +R +L SI+  I   VFY +   LY G ++   +  Y+
Sbjct: 855  KRSCTLAQFIMHRGLLISIVQAIFSCVFYFVAVSLYQGVLMVAFTSCYT 903


>Z81078-8|CAJ43906.1| 1071|Caenorhabditis elegans Hypothetical protein
            F36H2.1c protein.
          Length = 1071

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = -1

Query: 467  QRYSTLTCFVKNRNILFSIM*EILGFVFYCLMSLLYPGCILSEISLIYS 321
            +R   L+ FV +R ++ S M  I   VFY     LY G ++   S  Y+
Sbjct: 862  KRSCALSQFVMHRGLIISTMQAIFSCVFYFASVSLYQGVLMVAYSTCYT 910


>Z81078-7|CAD92377.1| 1035|Caenorhabditis elegans Hypothetical
           protein F36H2.1b protein.
          Length = 1035

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = -1

Query: 467 QRYSTLTCFVKNRNILFSIM*EILGFVFYCLMSLLYPGCILSEISLIYS 321
           +R   L+ FV +R ++ S M  I   VFY     LY G ++   S  Y+
Sbjct: 826 KRSCALSQFVMHRGLIISTMQAIFSCVFYFASVSLYQGVLMVAYSTCYT 874


>Z81078-6|CAB03079.2| 1074|Caenorhabditis elegans Hypothetical protein
            F36H2.1a protein.
          Length = 1074

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = -1

Query: 467  QRYSTLTCFVKNRNILFSIM*EILGFVFYCLMSLLYPGCILSEISLIYS 321
            +R   L+ FV +R ++ S M  I   VFY     LY G ++   S  Y+
Sbjct: 865  KRSCALSQFVMHRGLIISTMQAIFSCVFYFASVSLYQGVLMVAYSTCYT 913


>AL021466-5|CAJ43908.1| 1071|Caenorhabditis elegans Hypothetical
            protein F36H2.1c protein.
          Length = 1071

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = -1

Query: 467  QRYSTLTCFVKNRNILFSIM*EILGFVFYCLMSLLYPGCILSEISLIYS 321
            +R   L+ FV +R ++ S M  I   VFY     LY G ++   S  Y+
Sbjct: 862  KRSCALSQFVMHRGLIISTMQAIFSCVFYFASVSLYQGVLMVAYSTCYT 910


>AL021466-3|CAD92394.1| 1035|Caenorhabditis elegans Hypothetical
           protein F36H2.1b protein.
          Length = 1035

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = -1

Query: 467 QRYSTLTCFVKNRNILFSIM*EILGFVFYCLMSLLYPGCILSEISLIYS 321
           +R   L+ FV +R ++ S M  I   VFY     LY G ++   S  Y+
Sbjct: 826 KRSCALSQFVMHRGLIISTMQAIFSCVFYFASVSLYQGVLMVAYSTCYT 874


>AL021466-2|CAA16284.2| 1074|Caenorhabditis elegans Hypothetical
            protein F36H2.1a protein.
          Length = 1074

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = -1

Query: 467  QRYSTLTCFVKNRNILFSIM*EILGFVFYCLMSLLYPGCILSEISLIYS 321
            +R   L+ FV +R ++ S M  I   VFY     LY G ++   S  Y+
Sbjct: 865  KRSCALSQFVMHRGLIISTMQAIFSCVFYFASVSLYQGVLMVAYSTCYT 913


>AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical
           protein Y39B6A.18 protein.
          Length = 1352

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +2

Query: 674 SLKCLLAPIATYNRTSRELVRSGP 745
           SLK LL  I T NRTS +++ +GP
Sbjct: 181 SLKVLLTEIKTLNRTSFDILHNGP 204


>AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical
           protein Y80D3A.8 protein.
          Length = 1293

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +2

Query: 674 SLKCLLAPIATYNRTSRELVRSGP 745
           SLK LL  I T NRTS +++ +GP
Sbjct: 227 SLKVLLTEIKTLNRTSFDILHNGP 250


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,358,783
Number of Sequences: 27780
Number of extensions: 338093
Number of successful extensions: 771
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 771
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)