Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11k04f
         (574 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6FMC0 Cluster: Putative uncharacterized protein; n=1; ...    34   2.1  
UniRef50_Q0U956 Cluster: Putative uncharacterized protein; n=1; ...    34   2.1  
UniRef50_P19532 Cluster: Transcription factor E3; n=32; Euteleos...    34   2.7  
UniRef50_UPI00015545A7 Cluster: PREDICTED: similar to smoothelin...    33   4.8  
UniRef50_Q9VQB9 Cluster: CG3557-PA; n=1; Drosophila melanogaster...    33   6.3  

>UniRef50_A6FMC0 Cluster: Putative uncharacterized protein; n=1;
           Roseobacter sp. AzwK-3b|Rep: Putative uncharacterized
           protein - Roseobacter sp. AzwK-3b
          Length = 147

 Score = 34.3 bits (75), Expect = 2.1
 Identities = 17/32 (53%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
 Frame = -1

Query: 91  PVLLLAYLPERVPPT--LVLAEAEQGVPGVPL 2
           PVL    LPERVPPT  ++L + + G PGV L
Sbjct: 29  PVLRGEVLPERVPPTGLIILRDGDPGTPGVTL 60


>UniRef50_Q0U956 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 437

 Score = 34.3 bits (75), Expect = 2.1
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = +1

Query: 109 SQKEKRSQRASGKGTP*ARGERQSARRERKTATRDREGEQP 231
           SQ+E+   RA  +GTP ARG   S+R   +  +R+R   +P
Sbjct: 71  SQEERDRMRADSRGTPRARGPPGSSRPPPRAGSRERRERRP 111


>UniRef50_P19532 Cluster: Transcription factor E3; n=32;
           Euteleostomi|Rep: Transcription factor E3 - Homo sapiens
           (Human)
          Length = 743

 Score = 33.9 bits (74), Expect = 2.7
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = +3

Query: 3   RGTPGTPCSASASTSVGGTRSGRYASSSTGNI 98
           + TP TP + SAS+S GG+R+   +SSS+  +
Sbjct: 83  QATPATPATLSASSSAGGSRTPAMSSSSSSRV 114


>UniRef50_UPI00015545A7 Cluster: PREDICTED: similar to smoothelin;
           n=1; Ornithorhynchus anatinus|Rep: PREDICTED: similar to
           smoothelin - Ornithorhynchus anatinus
          Length = 1002

 Score = 33.1 bits (72), Expect = 4.8
 Identities = 16/28 (57%), Positives = 19/28 (67%)
 Frame = +3

Query: 3   RGTPGTPCSASASTSVGGTRSGRYASSS 86
           RG PGTP SA +S   GG+RS   +SSS
Sbjct: 504 RGEPGTPGSAPSSRGTGGSRSRSGSSSS 531


>UniRef50_Q9VQB9 Cluster: CG3557-PA; n=1; Drosophila
           melanogaster|Rep: CG3557-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 271

 Score = 32.7 bits (71), Expect = 6.3
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -2

Query: 552 SCIASASSMDGVRCCPGARSARFDFTH 472
           SC  +AS +    CCP  R+ R DF H
Sbjct: 138 SCFKTASRLSSAACCPRQRTPRVDFDH 164


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 381,199,287
Number of Sequences: 1657284
Number of extensions: 4801397
Number of successful extensions: 20269
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20242
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39154548218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)