Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11k04f
(574 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 22 3.2
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 22 3.2
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 22 3.2
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 22 3.2
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 22 3.2
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 22 3.2
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 22 3.2
AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory recept... 22 4.3
AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory recept... 22 4.3
AF251548-1|AAF70178.1| 491|Tribolium castaneum cytochrome P450 ... 21 5.6
AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix... 21 7.5
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 21 9.9
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.2 bits (45), Expect = 3.2
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +3
Query: 12 PGTPCSASASTSVGGTRSGRYASSST 89
PG P +++AS ++ S ++SST
Sbjct: 154 PGKPATSTASQNLSSPASSTSSTSST 179
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 22.2 bits (45), Expect = 3.2
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +3
Query: 12 PGTPCSASASTSVGGTRSGRYASSST 89
PG P +++AS ++ S ++SST
Sbjct: 154 PGKPATSTASQNLSSPASSTSSTSST 179
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.2 bits (45), Expect = 3.2
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +3
Query: 12 PGTPCSASASTSVGGTRSGRYASSST 89
PG P +++AS ++ S ++SST
Sbjct: 154 PGKPATSTASQNLSSPASSTSSTSST 179
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 22.2 bits (45), Expect = 3.2
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +3
Query: 12 PGTPCSASASTSVGGTRSGRYASSST 89
PG P +++AS ++ S ++SST
Sbjct: 154 PGKPATSTASQNLSSPASSTSSTSST 179
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 22.2 bits (45), Expect = 3.2
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +3
Query: 12 PGTPCSASASTSVGGTRSGRYASSST 89
PG P +++AS ++ S ++SST
Sbjct: 110 PGKPATSTASQNLSSPASSTSSTSST 135
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 22.2 bits (45), Expect = 3.2
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +3
Query: 12 PGTPCSASASTSVGGTRSGRYASSST 89
PG P +++AS ++ S ++SST
Sbjct: 154 PGKPATSTASQNLSSPASSTSSTSST 179
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 22.2 bits (45), Expect = 3.2
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +3
Query: 12 PGTPCSASASTSVGGTRSGRYASSST 89
PG P +++AS ++ S ++SST
Sbjct: 154 PGKPATSTASQNLSSPASSTSSTSST 179
>AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory receptor
candidate 44 protein.
Length = 313
Score = 21.8 bits (44), Expect = 4.3
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = -2
Query: 564 CAFLSCIASASSMDGVRCCP 505
C IA+ + ++G+R CP
Sbjct: 40 CIIFGAIATLTCIEGLRDCP 59
>AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory receptor
candidate 4 protein.
Length = 309
Score = 21.8 bits (44), Expect = 4.3
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = -2
Query: 564 CAFLSCIASASSMDGVRCCP 505
C IA+ + ++G+R CP
Sbjct: 36 CIIFGAIATLTCIEGLRDCP 55
>AF251548-1|AAF70178.1| 491|Tribolium castaneum cytochrome P450
monooxigenase CYP4Q4 protein.
Length = 491
Score = 21.4 bits (43), Expect = 5.6
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -1
Query: 94 FPVLLLAYLPERVPPTLVLAEAEQGVPGVPL 2
+P++ + R P L LAE E+G+ P+
Sbjct: 39 YPIIGNLFDIMRTPEQLFLAERERGLKYYPI 69
>AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix
transcription factor protein.
Length = 249
Score = 21.0 bits (42), Expect = 7.5
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +2
Query: 230 PKRRASVNAIPKNVNCNKRAEVGAAEPLSVAVQ 328
P+R AS + N + ++ E + PLS+ V+
Sbjct: 203 PQRTASTASSASNYSPSQSPEPESVRPLSLVVR 235
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 20.6 bits (41), Expect = 9.9
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = +3
Query: 12 PGTPCSASASTSVGGTRSGRYASSST 89
PG P +++ S ++ S ++SST
Sbjct: 154 PGKPATSTTSQNLSSPASSTSSTSST 179
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,975
Number of Sequences: 336
Number of extensions: 967
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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