Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11k03f
         (618 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    25   0.51 
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    25   0.51 
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    23   2.1  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   2.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   3.6  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   3.6  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   3.6  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   4.7  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   4.7  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   4.7  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   4.7  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   4.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.3  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   8.3  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 25.0 bits (52), Expect = 0.51
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -2

Query: 383 ETTLTNCHVVNTKTNIQWPYFFPQANKHQFS 291
           + +L  CH+V++ +NIQ    F +  +H F+
Sbjct: 372 DESLPGCHMVDSCSNIQTGEQFARLLRHNFN 402


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 25.0 bits (52), Expect = 0.51
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -2

Query: 383 ETTLTNCHVVNTKTNIQWPYFFPQANKHQFS 291
           + +L  CH+V++ +NIQ    F +  +H F+
Sbjct: 379 DESLPGCHMVDSCSNIQTGEQFARLLRHNFN 409


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 123 FLHFFMEAVNSKRCCPPDQYLLKNETV 203
           F+ FF+  V+     P DQY +K + V
Sbjct: 4   FVIFFVACVSVALARPEDQYTIKYDNV 30


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = +3

Query: 441 ETVFGYCMIVSVIFLAITVAIYSSFSNLRDLFGKSIISY 557
           ETV+ +  +  +I   ++V  Y S+ N        ++SY
Sbjct: 317 ETVYYFISLGLLILRLVSVCFYGSWINEESKLSLDLLSY 355


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -3

Query: 103 FN*IKFIFCLCY 68
           FN I F FC CY
Sbjct: 546 FNTIVFAFCYCY 557



 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -3

Query: 103 FN*IKFIFCLCY 68
           FN I F FC CY
Sbjct: 265 FNTIVFSFCYCY 276


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 575 YCHATTITYDAF 540
           YC  TT TYD+F
Sbjct: 335 YCVYTTATYDSF 346


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 575 YCHATTITYDAF 540
           YC  TT TYD+F
Sbjct: 60  YCVYTTATYDSF 71


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 207 WDSQTNETSQINMPCKKYVFIRK 275
           +D+Q + T    +P K+ VFIRK
Sbjct: 216 FDNQCSGTIDWALPNKRTVFIRK 238


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 167 PPRPIPPQKRNSLLG 211
           PP+P PP   NSL G
Sbjct: 177 PPQPEPPVTFNSLNG 191


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -2

Query: 296 FSISFYKLSYEHIFFTRHINL 234
           F   F K+SY HIF     N+
Sbjct: 190 FDYFFGKMSYSHIFSLMDYNI 210


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -2

Query: 296 FSISFYKLSYEHIFFTRHINL 234
           F   F K+SY HIF     N+
Sbjct: 190 FDYFFGKMSYSHIFSLMDYNI 210


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -2

Query: 296 FSISFYKLSYEHIFFTRHINL 234
           F   F K+SY HIF     N+
Sbjct: 190 FDYFFGKMSYSHIFSLMDYNI 210


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 531  DPASSKNYCIWQP 493
            +P S+ NY  WQP
Sbjct: 1359 NPGSTTNYPEWQP 1371


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 12/55 (21%), Positives = 26/55 (47%)
 Frame = +3

Query: 333 LNVSFCINDVAVGQSRLNLSIIQNVAVTCATEIDPKETVFGYCMIVSVIFLAITV 497
           L++++CI          +LSI+       +  I  K  +  Y +++ +  +A+TV
Sbjct: 43  LSINYCICGYIFSAILFSLSILGLTEDLNSAPIRMKNPIVKYIILIDLGEVAVTV 97


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,964
Number of Sequences: 336
Number of extensions: 3476
Number of successful extensions: 20
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)