Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11k02r
         (710 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U52365-1|AAC51135.1|  457|Homo sapiens SMCY protein.                   32   2.3  
U52191-1|AAC50806.1| 1539|Homo sapiens SMCY protein.                   32   2.3  
D87072-1|BAA13241.2| 1512|Homo sapiens KIAA0234 protein.               32   2.3  
BC146767-1|AAI46768.1| 1482|Homo sapiens JARID1D protein protein.      32   2.3  
BC132721-1|AAI32722.1| 1539|Homo sapiens jumonji, AT rich intera...    32   2.3  
AF273841-1|AAG00951.1| 1539|Homo sapiens SMCY protein.                 32   2.3  
BC127648-1|AAI27649.1|   96|Homo sapiens keratin associated prot...    31   5.4  
BC120942-1|AAI20943.1|   96|Homo sapiens keratin associated prot...    31   5.4  
BC119713-1|AAI19714.1|   96|Homo sapiens keratin associated prot...    31   5.4  
AJ566388-1|CAD97468.1|   96|Homo sapiens keratin associated prot...    31   5.4  
AB076363-1|BAD01550.1|   96|Homo sapiens keratin associated prot...    31   5.4  

>U52365-1|AAC51135.1|  457|Homo sapiens SMCY protein.
          Length = 457

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 16/61 (26%), Positives = 26/61 (42%)
 Frame = -2

Query: 502 CPKTHSETDNISSDRXQKLILESRYIDLEPCKSTRRETFSKTNVAGKLTPCVCEICRRYH 323
           CP T +  D  S        L  +++ LEPC  T  +     + A  +   +C++C R  
Sbjct: 265 CPPTVTVKDEQSGGGNVSSTLLKQHLSLEPCTKTTMQLRKNHSSAQFIDSYICQVCSRGD 324

Query: 322 E 320
           E
Sbjct: 325 E 325


>U52191-1|AAC50806.1| 1539|Homo sapiens SMCY protein.
          Length = 1539

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 16/61 (26%), Positives = 26/61 (42%)
 Frame = -2

Query: 502 CPKTHSETDNISSDRXQKLILESRYIDLEPCKSTRRETFSKTNVAGKLTPCVCEICRRYH 323
           CP T +  D  S        L  +++ LEPC  T  +     + A  +   +C++C R  
Sbjct: 265 CPPTVTVKDEQSGGGNVSSTLLKQHLSLEPCTKTTMQLRKNHSSAQFIDSYICQVCSRGD 324

Query: 322 E 320
           E
Sbjct: 325 E 325


>D87072-1|BAA13241.2| 1512|Homo sapiens KIAA0234 protein.
          Length = 1512

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 16/61 (26%), Positives = 26/61 (42%)
 Frame = -2

Query: 502 CPKTHSETDNISSDRXQKLILESRYIDLEPCKSTRRETFSKTNVAGKLTPCVCEICRRYH 323
           CP T +  D  S        L  +++ LEPC  T  +     + A  +   +C++C R  
Sbjct: 238 CPPTVTVKDEQSGGGNVSSTLLKQHLSLEPCTKTTMQLRKNHSSAQFIDSYICQVCSRGD 297

Query: 322 E 320
           E
Sbjct: 298 E 298


>BC146767-1|AAI46768.1| 1482|Homo sapiens JARID1D protein protein.
          Length = 1482

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 16/61 (26%), Positives = 26/61 (42%)
 Frame = -2

Query: 502 CPKTHSETDNISSDRXQKLILESRYIDLEPCKSTRRETFSKTNVAGKLTPCVCEICRRYH 323
           CP T +  D  S        L  +++ LEPC  T  +     + A  +   +C++C R  
Sbjct: 208 CPPTVTVKDEQSGGGNVSSTLLKQHLSLEPCTKTTMQLRKNHSSAQFIDSYICQVCSRGD 267

Query: 322 E 320
           E
Sbjct: 268 E 268


>BC132721-1|AAI32722.1| 1539|Homo sapiens jumonji, AT rich
           interactive domain 1D protein.
          Length = 1539

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 16/61 (26%), Positives = 26/61 (42%)
 Frame = -2

Query: 502 CPKTHSETDNISSDRXQKLILESRYIDLEPCKSTRRETFSKTNVAGKLTPCVCEICRRYH 323
           CP T +  D  S        L  +++ LEPC  T  +     + A  +   +C++C R  
Sbjct: 265 CPPTVTVKDEQSGGGNVSSTLLKQHLSLEPCTKTTMQLRKNHSSAQFIDSYICQVCSRGD 324

Query: 322 E 320
           E
Sbjct: 325 E 325


>AF273841-1|AAG00951.1| 1539|Homo sapiens SMCY protein.
          Length = 1539

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 16/61 (26%), Positives = 26/61 (42%)
 Frame = -2

Query: 502 CPKTHSETDNISSDRXQKLILESRYIDLEPCKSTRRETFSKTNVAGKLTPCVCEICRRYH 323
           CP T +  D  S        L  +++ LEPC  T  +     + A  +   +C++C R  
Sbjct: 265 CPPTVTVKDEQSGGGNVSSTLLKQHLSLEPCTKTTMQLRKNHSSAQFIDSYICQVCSRGD 324

Query: 322 E 320
           E
Sbjct: 325 E 325


>BC127648-1|AAI27649.1|   96|Homo sapiens keratin associated protein
           12-1 protein.
          Length = 96

 Score = 30.7 bits (66), Expect = 5.4
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +1

Query: 382 C*TSPCALTCRARGRYSDSLILTFXFCPSLCCPFRCAS 495
           C  SPC  +C        S+ +   F P++C P RC S
Sbjct: 15  CAPSPCQASCYIPVGCQSSVCVPVSFKPAVCVPVRCQS 52


>BC120942-1|AAI20943.1|   96|Homo sapiens keratin associated protein
           12-1 protein.
          Length = 96

 Score = 30.7 bits (66), Expect = 5.4
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +1

Query: 382 C*TSPCALTCRARGRYSDSLILTFXFCPSLCCPFRCAS 495
           C  SPC  +C        S+ +   F P++C P RC S
Sbjct: 15  CAPSPCQASCYIPVGCQSSVCVPVSFKPAVCVPVRCQS 52


>BC119713-1|AAI19714.1|   96|Homo sapiens keratin associated protein
           12-1 protein.
          Length = 96

 Score = 30.7 bits (66), Expect = 5.4
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +1

Query: 382 C*TSPCALTCRARGRYSDSLILTFXFCPSLCCPFRCAS 495
           C  SPC  +C        S+ +   F P++C P RC S
Sbjct: 15  CAPSPCQASCYIPVGCQSSVCVPVSFKPAVCVPVRCQS 52


>AJ566388-1|CAD97468.1|   96|Homo sapiens keratin associated protein
           KAP12.1 protein.
          Length = 96

 Score = 30.7 bits (66), Expect = 5.4
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +1

Query: 382 C*TSPCALTCRARGRYSDSLILTFXFCPSLCCPFRCAS 495
           C  SPC  +C        S+ +   F P++C P RC S
Sbjct: 15  CAPSPCQASCYIPVGCQSSVCVPVSFKPAVCVPVRCQS 52


>AB076363-1|BAD01550.1|   96|Homo sapiens keratin associated protein
           protein.
          Length = 96

 Score = 30.7 bits (66), Expect = 5.4
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +1

Query: 382 C*TSPCALTCRARGRYSDSLILTFXFCPSLCCPFRCAS 495
           C  SPC  +C        S+ +   F P++C P RC S
Sbjct: 15  CAPSPCQASCYIPVGCQSSVCVPVSFKPAVCVPVRCQS 52


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,186,436
Number of Sequences: 237096
Number of extensions: 1220865
Number of successful extensions: 2411
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2411
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)