Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11k02f
         (658 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RLA0 Cluster: Putative uncharacterized protein PY0264...    33   6.0  
UniRef50_Q4N065 Cluster: Putative uncharacterized protein; n=2; ...    33   8.0  

>UniRef50_Q7RLA0 Cluster: Putative uncharacterized protein PY02646;
           n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY02646 - Plasmodium yoelii yoelii
          Length = 1230

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 9/74 (12%)
 Frame = +1

Query: 181 IFNHNLN-YINRFAKTYPIVIFF-------N*TKHFYFGYVF*SV*KLYVEFYSNKLIS- 333
           +FN+N+N YI +F     I+ +F       N   +FYF ++F +    YV F +NK+I+ 
Sbjct: 537 LFNNNINAYIKKFINLLNIMTYFLEYIHEINKKFYFYFIFIFGTALLKYVIFLNNKIINM 596

Query: 334 IYCQYSNTRFHSYN 375
           I    S   F+ Y+
Sbjct: 597 IQNHLSINLFNDYH 610


>UniRef50_Q4N065 Cluster: Putative uncharacterized protein; n=2;
           Theileria|Rep: Putative uncharacterized protein -
           Theileria parva
          Length = 337

 Score = 32.7 bits (71), Expect = 8.0
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +1

Query: 529 VENLNEFNNEICNIILCTLPYAKCFIAIAFIRINHFSIYG 648
           +E+ +EF  E+C+I L TL Y   F +      N+  IYG
Sbjct: 149 IESKSEFEREMCSIFLNTLKYKHLFDSYGIDGYNNILIYG 188


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 540,413,107
Number of Sequences: 1657284
Number of extensions: 10079179
Number of successful extensions: 21362
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 20261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21358
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49586781480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)