Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11k02f
         (658 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069360-1|AAL39505.1|  357|Drosophila melanogaster LD06403p pro...    29   5.6  
AE014296-3028|ABC66132.1|  424|Drosophila melanogaster CG4174-PC...    29   5.6  
AE014296-3027|AAF49256.2|  435|Drosophila melanogaster CG4174-PA...    29   5.6  
AE014296-3026|ABC66131.1|  357|Drosophila melanogaster CG4174-PB...    29   5.6  
BT003656-1|AAO39660.1|  677|Drosophila melanogaster AT01533p pro...    29   7.3  
AE014134-1991|AAF53037.2|  677|Drosophila melanogaster CG33129-P...    29   7.3  

>AY069360-1|AAL39505.1|  357|Drosophila melanogaster LD06403p
           protein.
          Length = 357

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -1

Query: 373 YRNEILYLSTDSKYLLIYLNKILHIISRPIK 281
           Y NE+L ++ +  Y+L  L K+ H+ S P K
Sbjct: 122 YANELLSINPNHTYMLTQLPKLKHLQSNPAK 152


>AE014296-3028|ABC66132.1|  424|Drosophila melanogaster CG4174-PC,
           isoform C protein.
          Length = 424

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -1

Query: 373 YRNEILYLSTDSKYLLIYLNKILHIISRPIK 281
           Y NE+L ++ +  Y+L  L K+ H+ S P K
Sbjct: 189 YANELLSINPNHTYMLTQLPKLKHLQSNPAK 219


>AE014296-3027|AAF49256.2|  435|Drosophila melanogaster CG4174-PA,
           isoform A protein.
          Length = 435

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -1

Query: 373 YRNEILYLSTDSKYLLIYLNKILHIISRPIK 281
           Y NE+L ++ +  Y+L  L K+ H+ S P K
Sbjct: 200 YANELLSINPNHTYMLTQLPKLKHLQSNPAK 230


>AE014296-3026|ABC66131.1|  357|Drosophila melanogaster CG4174-PB,
           isoform B protein.
          Length = 357

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -1

Query: 373 YRNEILYLSTDSKYLLIYLNKILHIISRPIK 281
           Y NE+L ++ +  Y+L  L K+ H+ S P K
Sbjct: 122 YANELLSINPNHTYMLTQLPKLKHLQSNPAK 152


>BT003656-1|AAO39660.1|  677|Drosophila melanogaster AT01533p
           protein.
          Length = 677

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 463 LLKKYIYSPIKFVNTYCCLIKLVENLNEFNNEICNIILCTL 585
           LL+ YI SP++  N +  L + +   ++  NEI   I C L
Sbjct: 343 LLQHYINSPVRHANIFLTLFREISAGSKQTNEIEGCISCLL 383


>AE014134-1991|AAF53037.2|  677|Drosophila melanogaster CG33129-PE,
           isoform E protein.
          Length = 677

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 463 LLKKYIYSPIKFVNTYCCLIKLVENLNEFNNEICNIILCTL 585
           LL+ YI SP++  N +  L + +   ++  NEI   I C L
Sbjct: 343 LLQHYINSPVRHANIFLTLFREISAGSKQTNEIEGCISCLL 383


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,043,049
Number of Sequences: 53049
Number of extensions: 410341
Number of successful extensions: 665
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 665
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)