Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11k01r
         (724 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    29   0.029
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    27   0.20 
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    25   0.82 
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    25   0.82 
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   3.3  
AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    23   3.3  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   5.8  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   7.6  
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    21   7.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 29.5 bits (63), Expect = 0.029
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -2

Query: 447 VYLLFYCMCVSCAISQIACAFYVHLNYNQFCPFVCFYY 334
           V+LLFYC  +   +  + C +Y    Y  F   +C YY
Sbjct: 81  VHLLFYCPFIIFTVHFLLCTYYF---YYAFIILLCVYY 115


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 26.6 bits (56), Expect = 0.20
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +3

Query: 408 LHRKHTYNKITNTPYLHHTSEYKIEFTKRFHF 503
           LHRK TYN +    YL    +  +      HF
Sbjct: 50  LHRKPTYNNLQEMKYLERAIKESLRLYPSVHF 81


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 24.6 bits (51), Expect = 0.82
 Identities = 13/50 (26%), Positives = 25/50 (50%)
 Frame = -3

Query: 443 ICYFIVCVFPVQSHK*HVLFMCI*IIISSAHLFVSITNLTQKKNCIQSLL 294
           +CY ++  FP +SH+   L+M   +I  S   F +      K++ +  +L
Sbjct: 308 LCYKLMEKFPERSHEQQELYMAAQVIEKSVANFTAAGFFDVKRSTLFGIL 357


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 24.6 bits (51), Expect = 0.82
 Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
 Frame = +3

Query: 318 FLCEICNRN---KQMGRTDYNSNAHKKHMLFVRLHRKHTYNKITNTPYLHHTSE--YKIE 482
           F CE+CNR+   K + +    ++  +K       H++ T +    T    HT E  Y+ E
Sbjct: 135 FTCEVCNRSFGYKHVLQNHERTHTGEKPFECQECHKRFTRDHHLKTHMRLHTGERPYRCE 194

Query: 483 FTKR 494
              R
Sbjct: 195 HCDR 198


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +3

Query: 336 NRNKQMGRTDYNSNAHKKHMLFVRLHRKHT 425
           NR   +  T   SN   +H++  R H +HT
Sbjct: 254 NRLLVLAGTSSPSNRFTRHLIQRRTHTRHT 283


>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 11/45 (24%), Positives = 18/45 (40%)
 Frame = +3

Query: 408 LHRKHTYNKITNTPYLHHTSEYKIEFTKRFHFHWELWSDTLVESG 542
           L +K +YN + N  YL    +  +      HF        L+ +G
Sbjct: 33  LSKKPSYNDLQNLKYLERCIKETLRLYPSVHFISRTLGQDLITTG 77


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +3

Query: 366 YNSNAHKKHMLFVRLHRKHTYNKITNTPYLHH 461
           YN + H  HM F++L      +    +P + H
Sbjct: 105 YNHSPHLSHMQFMQLPHPAAAHSALLSPAMPH 136


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -3

Query: 560 LFSIKYP*LYQSIRPQLPMEMKSLCE 483
           LFS+ YP +   ++  L    ++LC+
Sbjct: 152 LFSVCYPRVSAQMKADLRSHFRALCQ 177


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 13/51 (25%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
 Frame = +3

Query: 408 LHRKHTYNKITNTPYLHHTSEYKIEFTKRFH-FHWELWSDTLVESGILNTK 557
           +H K TY+ + N  YL    +  +      H     L  D   + G L  K
Sbjct: 33  IHAKPTYSDLQNLKYLERCIKESLRLYPSVHLISRALGEDVRTQKGYLIPK 83


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,210
Number of Sequences: 336
Number of extensions: 4764
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)