Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11k01r
         (724 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY128494-1|AAM75087.1|  438|Drosophila melanogaster RH42690p pro...    32   0.69 
AE014298-919|AAF46183.2|  438|Drosophila melanogaster CG3198-PA ...    32   0.69 
AY121686-1|AAM52013.1|  946|Drosophila melanogaster RE37047p pro...    31   1.6  
AF454392-1|AAL51005.1|  678|Drosophila melanogaster activin prot...    31   1.6  
AE014135-186|AAF59386.3|  946|Drosophila melanogaster CG11062-PA...    31   1.6  
AY121685-1|AAM52012.1|  539|Drosophila melanogaster RE36877p pro...    29   4.8  
AE013599-2222|AAF58040.2|  539|Drosophila melanogaster CG15706-P...    29   4.8  
BT024336-1|ABC86398.1|  271|Drosophila melanogaster IP10110p pro...    29   6.4  
AE014134-1566|AAO41172.1|  257|Drosophila melanogaster CG32987-P...    29   6.4  

>AY128494-1|AAM75087.1|  438|Drosophila melanogaster RH42690p
           protein.
          Length = 438

 Score = 32.3 bits (70), Expect = 0.69
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +2

Query: 611 GGSRIPRSAHNHNDGHYQYHCPDQH 685
           G SR  RS HNHN  HY++   ++H
Sbjct: 405 GSSRSNRSHHNHNHNHYRHDSRERH 429


>AE014298-919|AAF46183.2|  438|Drosophila melanogaster CG3198-PA
           protein.
          Length = 438

 Score = 32.3 bits (70), Expect = 0.69
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +2

Query: 611 GGSRIPRSAHNHNDGHYQYHCPDQH 685
           G SR  RS HNHN  HY++   ++H
Sbjct: 405 GSSRSNRSHHNHNHNHYRHDSRERH 429


>AY121686-1|AAM52013.1|  946|Drosophila melanogaster RE37047p
           protein.
          Length = 946

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 14/59 (23%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = +3

Query: 324 CEICNRNKQMGRTDYNSNAHKKHMLFVRLHRKHTYNKITNTPY--LHHTSEYKIEFTKR 494
           C +C+ + +        N H  + ++ + H  + +NK TN P+  +  + E ++E  KR
Sbjct: 318 CTLCHESGKPNIYTDKDNPHTDYNIYNKYHSNNNFNKKTNQPHNNIAPSDEVRLESIKR 376


>AF454392-1|AAL51005.1|  678|Drosophila melanogaster activin
           protein.
          Length = 678

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 14/59 (23%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = +3

Query: 324 CEICNRNKQMGRTDYNSNAHKKHMLFVRLHRKHTYNKITNTPY--LHHTSEYKIEFTKR 494
           C +C+ + +        N H  + ++ + H  + +NK TN P+  +  + E ++E  KR
Sbjct: 50  CTLCHESGKPNIYTDKDNPHTDYNIYNKYHSNNNFNKKTNQPHNNIAPSDEVRLESIKR 108


>AE014135-186|AAF59386.3|  946|Drosophila melanogaster CG11062-PA
           protein.
          Length = 946

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 14/59 (23%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = +3

Query: 324 CEICNRNKQMGRTDYNSNAHKKHMLFVRLHRKHTYNKITNTPY--LHHTSEYKIEFTKR 494
           C +C+ + +        N H  + ++ + H  + +NK TN P+  +  + E ++E  KR
Sbjct: 318 CTLCHESGKPNIYTDKDNPHTDYNIYNKYHSNNNFNKKTNQPHNNIAPSDEVRLESIKR 376


>AY121685-1|AAM52012.1|  539|Drosophila melanogaster RE36877p
           protein.
          Length = 539

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 6/36 (16%)
 Frame = -1

Query: 457 CRYGVFVILLYVCFLC------NLTNSMCFLCAFEL 368
           C YG     L+VC LC      N+TNS+   C F+L
Sbjct: 198 CIYGAGKFWLFVCLLCIGIVGFNVTNSISDACCFDL 233


>AE013599-2222|AAF58040.2|  539|Drosophila melanogaster CG15706-PA
           protein.
          Length = 539

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 6/36 (16%)
 Frame = -1

Query: 457 CRYGVFVILLYVCFLC------NLTNSMCFLCAFEL 368
           C YG     L+VC LC      N+TNS+   C F+L
Sbjct: 198 CIYGAGKFWLFVCLLCIGIVGFNVTNSISDACCFDL 233


>BT024336-1|ABC86398.1|  271|Drosophila melanogaster IP10110p
           protein.
          Length = 271

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -3

Query: 512 LPMEMKSLCELYFVFRGMM*IWCICYFIV 426
           +P E   +C L      MM  +C+CYFI+
Sbjct: 219 VPEEHLMVCTLTLYLHSMMFFFCVCYFIL 247


>AE014134-1566|AAO41172.1|  257|Drosophila melanogaster CG32987-PA
           protein.
          Length = 257

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -3

Query: 512 LPMEMKSLCELYFVFRGMM*IWCICYFIV 426
           +P E   +C L      MM  +C+CYFI+
Sbjct: 205 VPEEHLMVCTLTLYLHSMMFFFCVCYFIL 233


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,935,372
Number of Sequences: 53049
Number of extensions: 739751
Number of successful extensions: 2070
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2065
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)