Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11k01f
         (582 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    25   0.47 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    25   0.47 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    25   0.47 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    25   0.47 
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   1.9  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    22   3.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.4  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   5.8  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   7.6  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 25.0 bits (52), Expect = 0.47
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 447 KKGLEQYFYCIFLFVLWWKICL 512
           K+ LEQ  Y I++FV  WK CL
Sbjct: 288 KENLEQSRYFIYMFVSVWK-CL 308


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 25.0 bits (52), Expect = 0.47
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 447 KKGLEQYFYCIFLFVLWWKICL 512
           K+ LEQ  Y I++FV  WK CL
Sbjct: 288 KENLEQSRYFIYMFVSVWK-CL 308


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 25.0 bits (52), Expect = 0.47
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 447 KKGLEQYFYCIFLFVLWWKICL 512
           K+ LEQ  Y I++FV  WK CL
Sbjct: 288 KENLEQSRYFIYMFVSVWK-CL 308


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 25.0 bits (52), Expect = 0.47
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 447 KKGLEQYFYCIFLFVLWWKICL 512
           K+ LEQ  Y I++FV  WK CL
Sbjct: 288 KENLEQSRYFIYMFVSVWK-CL 308


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 242 PFPVHRTTLAIPLTRQAAH 186
           P P H T+  +PLT   AH
Sbjct: 326 PVPGHSTSPNLPLTHNIAH 344


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +1

Query: 76  IYFKKYSRNCHTRPKQHNR 132
           ++FK     C  + KQHN+
Sbjct: 115 VWFKNRRAKCRQQQKQHNQ 133


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 84  KIYTFTIVLNKFHSHLTVTLRSGWIT 7
           +IY F  V   F+ HL   L SG+ T
Sbjct: 55  RIYYFYCVSITFNVHLLFLLCSGYFT 80


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +2

Query: 389 LKEEYEGSHY*NRDHKFILKKRFRTVFLLYLFICTLVENL 508
           LK E +G+    R  +  L +RFR + L ++     +ENL
Sbjct: 333 LKHEQQGAAPDYRHWQIPLGRRFRALKLWFVLRLYGIENL 372


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +2

Query: 113 DLNNTTAISTVLS*TRTFPQTWVMRVLLV 199
           D NNT+  +     T  F   WV+ V++V
Sbjct: 11  DSNNTSLDAFYFFETEQFTLLWVLFVIIV 39


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,277
Number of Sequences: 336
Number of extensions: 3060
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14517299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)