Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11j20f
         (650 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070682-1|AAL48153.1|  186|Drosophila melanogaster RH17657p pro...   208   7e-54
AY070637-1|AAL48108.1|  186|Drosophila melanogaster RH02211p pro...   208   7e-54
AE014296-2100|AAF49954.1|  186|Drosophila melanogaster CG9762-PA...   208   7e-54

>AY070682-1|AAL48153.1|  186|Drosophila melanogaster RH17657p
           protein.
          Length = 186

 Score =  208 bits (507), Expect = 7e-54
 Identities = 92/186 (49%), Positives = 125/186 (67%)
 Frame = +3

Query: 21  MVSWSALGRSFGINLVKNSLKSPNKIQNVTFTTAKTLKGSHGERTMALQPSRWQWHKFKD 200
           MV WS L           ++      +N      + + G HG   M ++PSR+QW KFKD
Sbjct: 1   MVGWSRLLSPAAKFASYRAVLQEPACRNALHQQLRRMGGDHGHHQMIIKPSRFQWDKFKD 60

Query: 201 MLHFYMMVGLIPAGALIFYCNVFIGPAQLTPIPEGYTPKYWEYHRHPITRFIARYIHNNP 380
           +LHFY+M+G+IP  AL+ Y N+F+GPAQL  IPEGY PK+WEY +HPI+RFI+RYI N+ 
Sbjct: 61  LLHFYVMLGVIPVTALVLYANIFVGPAQLAEIPEGYEPKHWEYEKHPISRFISRYILNSD 120

Query: 381 QQDYEKFMHFLDEEQQRIKLRALEKEIIKKMAERQDYQAYYYKPMVNKYLRMNKRTGDEL 560
           QQ+YEK +H+L EE ++ ++R LE E+ +KM+ER DYQAYYY+P V KY R++K   DEL
Sbjct: 121 QQNYEKSLHYLYEENEKAQIRLLEDEVRRKMSERNDYQAYYYRPSVAKYHRISKEAADEL 180

Query: 561 YNRIGD 578
               GD
Sbjct: 181 EALRGD 186


>AY070637-1|AAL48108.1|  186|Drosophila melanogaster RH02211p
           protein.
          Length = 186

 Score =  208 bits (507), Expect = 7e-54
 Identities = 92/186 (49%), Positives = 125/186 (67%)
 Frame = +3

Query: 21  MVSWSALGRSFGINLVKNSLKSPNKIQNVTFTTAKTLKGSHGERTMALQPSRWQWHKFKD 200
           MV WS L           ++      +N      + + G HG   M ++PSR+QW KFKD
Sbjct: 1   MVGWSRLLSPAAKFASYRAVLQEPACRNALHQQLRRMGGDHGHHQMIIKPSRFQWDKFKD 60

Query: 201 MLHFYMMVGLIPAGALIFYCNVFIGPAQLTPIPEGYTPKYWEYHRHPITRFIARYIHNNP 380
           +LHFY+M+G+IP  AL+ Y N+F+GPAQL  IPEGY PK+WEY +HPI+RFI+RYI N+ 
Sbjct: 61  LLHFYVMLGVIPVTALVLYANIFVGPAQLAEIPEGYEPKHWEYEKHPISRFISRYILNSD 120

Query: 381 QQDYEKFMHFLDEEQQRIKLRALEKEIIKKMAERQDYQAYYYKPMVNKYLRMNKRTGDEL 560
           QQ+YEK +H+L EE ++ ++R LE E+ +KM+ER DYQAYYY+P V KY R++K   DEL
Sbjct: 121 QQNYEKSLHYLYEENEKAQIRLLEDEVRRKMSERNDYQAYYYRPSVAKYHRISKEAADEL 180

Query: 561 YNRIGD 578
               GD
Sbjct: 181 EALRGD 186


>AE014296-2100|AAF49954.1|  186|Drosophila melanogaster CG9762-PA
           protein.
          Length = 186

 Score =  208 bits (507), Expect = 7e-54
 Identities = 92/186 (49%), Positives = 125/186 (67%)
 Frame = +3

Query: 21  MVSWSALGRSFGINLVKNSLKSPNKIQNVTFTTAKTLKGSHGERTMALQPSRWQWHKFKD 200
           MV WS L           ++      +N      + + G HG   M ++PSR+QW KFKD
Sbjct: 1   MVGWSRLLSPAAKFASYRAVLQEPACRNALHQQLRRMGGDHGHHQMIIKPSRFQWDKFKD 60

Query: 201 MLHFYMMVGLIPAGALIFYCNVFIGPAQLTPIPEGYTPKYWEYHRHPITRFIARYIHNNP 380
           +LHFY+M+G+IP  AL+ Y N+F+GPAQL  IPEGY PK+WEY +HPI+RFI+RYI N+ 
Sbjct: 61  LLHFYVMLGVIPVTALVLYANIFVGPAQLAEIPEGYEPKHWEYEKHPISRFISRYILNSD 120

Query: 381 QQDYEKFMHFLDEEQQRIKLRALEKEIIKKMAERQDYQAYYYKPMVNKYLRMNKRTGDEL 560
           QQ+YEK +H+L EE ++ ++R LE E+ +KM+ER DYQAYYY+P V KY R++K   DEL
Sbjct: 121 QQNYEKSLHYLYEENEKAQIRLLEDEVRRKMSERNDYQAYYYRPSVAKYHRISKEAADEL 180

Query: 561 YNRIGD 578
               GD
Sbjct: 181 EALRGD 186


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,769,940
Number of Sequences: 53049
Number of extensions: 735542
Number of successful extensions: 1757
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1757
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)